RNA–Protein interactions for RNA: ENST00000471344.1

COL1A1-203, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 1,192 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-203ENST00000471344 MAKP20794 623 aa13.19□□□□□ -0.3
COL1A1-203ENST00000471344 GLRXP35754 106 aa13.19□□□□□ -0.3
COL1A1-203ENST00000471344 GZMKP49863 264 aa13.19□□□□□ -0.3
COL1A1-203ENST00000471344 GALK2Q01415 458 aa13.19□□□□□ -0.3
COL1A1-203ENST00000471344 LIPEQ05469 1076 aa13.19□□□□□ -0.3
COL1A1-203ENST00000471344 SLC15A3Q8IY34 581 aa13.19□□□□□ -0.3
COL1A1-203ENST00000471344 LRRC18Q8N456 261 aa13.19□□□□□ -0.3
COL1A1-203ENST00000471344 RBM15BQ8NDT2 890 aaKnown RBP13.19□□□□□ -0.3
COL1A1-203ENST00000471344 SLC30A7Q8NEW0 376 aa13.19□□□□□ -0.3
COL1A1-203ENST00000471344 NMD3Q96D46 503 aaKnown RBP13.19□□□□□ -0.3
COL1A1-203ENST00000471344 PRRC1Q96M27 445 aa13.19□□□□□ -0.3
COL1A1-203ENST00000471344 TSPAN32Q96QS1 320 aa13.19□□□□□ -0.3
COL1A1-203ENST00000471344 SNX18Q96RF0 628 aa13.19□□□□□ -0.3
COL1A1-203ENST00000471344 POLR2J2Q9GZM3 115 aaKnown RBP13.19□□□□□ -0.3
COL1A1-203ENST00000471344 POLR2J3Q9H1A7 115 aaKnown RBP13.19□□□□□ -0.3
COL1A1-203ENST00000471344 MYOZ1Q9NP98 299 aaPredicted RBP13.19□□□□□ -0.3
COL1A1-203ENST00000471344 CDC42EP3Q9UKI2 254 aa13.19□□□□□ -0.3
COL1A1-203ENST00000471344 MED31Q9Y3C7 131 aa13.19□□□□□ -0.3
COL1A1-203ENST00000471344 UGT2A1Q9Y4X1 527 aa13.19□□□□□ -0.3
COL1A1-203ENST00000471344 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.19□□□□□ -0.3
COL1A1-203ENST00000471344 GMNCA6NCL1 334 aa13.18□□□□□ -0.3
COL1A1-203ENST00000471344 M0R233 179 aa13.18□□□□□ -0.3
COL1A1-203ENST00000471344 FFAR1O14842 300 aa13.18□□□□□ -0.3
COL1A1-203ENST00000471344 SYNGR3O43761 229 aa13.18□□□□□ -0.3
COL1A1-203ENST00000471344 LMX1BO60663 402 aa13.18□□□□□ -0.3
COL1A1-203ENST00000471344 LILRA1O75019 489 aa13.18□□□□□ -0.3
COL1A1-203ENST00000471344 NCR1O76036 304 aa13.18□□□□□ -0.3
COL1A1-203ENST00000471344 CLPTM1O96005 669 aa13.18□□□□□ -0.3
COL1A1-203ENST00000471344 IFNA14P01570 189 aa13.18□□□□□ -0.3
COL1A1-203ENST00000471344 HPXP02790 462 aa13.18□□□□□ -0.3
COL1A1-203ENST00000471344 FAM157CP0CG43 387 aa13.18□□□□□ -0.3
COL1A1-203ENST00000471344 COX4I1P13073 169 aa13.18□□□□□ -0.3
COL1A1-203ENST00000471344 IFI30P13284 250 aa13.18□□□□□ -0.3
COL1A1-203ENST00000471344 GIFP27352 417 aa13.18□□□□□ -0.3
COL1A1-203ENST00000471344 DAP3P51398 398 aaKnown RBP13.18□□□□□ -0.3
COL1A1-203ENST00000471344 SLC7A2P52569 658 aa13.18□□□□□ -0.3
COL1A1-203ENST00000471344 SELENOWP63302 87 aa13.18□□□□□ -0.3
COL1A1-203ENST00000471344 SRSF2Q01130 221 aaKnown RBP13.18□□□□□ -0.3
COL1A1-203ENST00000471344 FHL1Q13642 323 aa13.18□□□□□ -0.3
COL1A1-203ENST00000471344 RIN1Q13671 783 aa13.18□□□□□ -0.3
COL1A1-203ENST00000471344 ELFN2Q5R3F8 820 aa13.18□□□□□ -0.3
COL1A1-203ENST00000471344 SLC16A14Q7RTX9 510 aa13.18□□□□□ -0.3
COL1A1-203ENST00000471344 ZNF786Q8N393 782 aa13.18□□□□□ -0.3
COL1A1-203ENST00000471344 UBASH3BQ8TF42 649 aa13.18□□□□□ -0.3
COL1A1-203ENST00000471344 NEU4Q8WWR8 484 aaPredicted RBP13.18□□□□□ -0.3
COL1A1-203ENST00000471344 LIPHQ8WWY8 451 aa13.18□□□□□ -0.3
COL1A1-203ENST00000471344 NSMAFQ92636 917 aa13.18□□□□□ -0.3
COL1A1-203ENST00000471344 GTF3AQ92664 365 aaKnown RBP13.18□□□□□ -0.3
COL1A1-203ENST00000471344 NABP1Q96AH0 204 aa13.18□□□□□ -0.3
COL1A1-203ENST00000471344 DENND2DQ9H6A0 471 aaPredicted RBP13.18□□□□□ -0.3
COL1A1-203ENST00000471344 RNF121Q9H920 327 aa13.18□□□□□ -0.3
COL1A1-203ENST00000471344 REV1Q9UBZ9 1251 aa13.18□□□□□ -0.3
COL1A1-203ENST00000471344 SLC7A8Q9UHI5 535 aa13.18□□□□□ -0.3
COL1A1-203ENST00000471344 TRAV27A0A087WT01 109 aa13.17□□□□□ -0.3
COL1A1-203ENST00000471344 VSTM5A8MXK1 200 aa13.17□□□□□ -0.3
COL1A1-203ENST00000471344 CXCR6O00574 342 aa13.17□□□□□ -0.3
COL1A1-203ENST00000471344 SNX3O60493 162 aa13.17□□□□□ -0.3
COL1A1-203ENST00000471344 FARS2O95363 451 aaKnown RBP13.17□□□□□ -0.3
COL1A1-203ENST00000471344 ZNF682O95780 498 aa13.17□□□□□ -0.3
COL1A1-203ENST00000471344 IGF2P01344 180 aa13.17□□□□□ -0.3
COL1A1-203ENST00000471344 MMP7P09237 267 aaPredicted RBP13.17□□□□□ -0.3
COL1A1-203ENST00000471344 THRBP10828 461 aa13.17□□□□□ -0.3
COL1A1-203ENST00000471344 NAT2P11245 290 aa13.17□□□□□ -0.3
COL1A1-203ENST00000471344 APEX1P27695 318 aaKnown RBP13.17□□□□□ -0.3
COL1A1-203ENST00000471344 ZNF133P52736 654 aaPredicted RBP13.17□□□□□ -0.3
COL1A1-203ENST00000471344 CCNIQ14094 377 aa13.17□□□□□ -0.3
COL1A1-203ENST00000471344 ALG10Q5BKT4 473 aa13.17□□□□□ -0.3
COL1A1-203ENST00000471344 C10orf128Q5T292 105 aa13.17□□□□□ -0.3
COL1A1-203ENST00000471344 FAM166AQ6J272 317 aa13.17□□□□□ -0.3
COL1A1-203ENST00000471344 C8orf82Q6P1X6 216 aaPredicted RBP13.17□□□□□ -0.3
COL1A1-203ENST00000471344 TMEM53Q6P2H8 277 aa13.17□□□□□ -0.3
COL1A1-203ENST00000471344 NRMQ8IXM6 262 aa13.17□□□□□ -0.3
COL1A1-203ENST00000471344 OR13C2Q8NGS9 318 aa13.17□□□□□ -0.3
COL1A1-203ENST00000471344 BPIFA2Q96DR5 249 aa13.17□□□□□ -0.3
COL1A1-203ENST00000471344 BEX2Q9BXY8 128 aa13.17□□□□□ -0.3
COL1A1-203ENST00000471344 TMEM160Q9NX00 188 aa13.17□□□□□ -0.3
COL1A1-203ENST00000471344 DUSP13Q9UII6 198 aa13.17□□□□□ -0.3
COL1A1-203ENST00000471344 HIF3AQ9Y2N7 669 aa13.17□□□□□ -0.3
COL1A1-203ENST00000471344 SPEF1Q9Y4P9 236 aa13.17□□□□□ -0.3
COL1A1-203ENST00000471344 FBN3Q75N90 2809 aa13.17□□□□□ -0.3
COL1A1-203ENST00000471344 A0A1W2PPW3 197 aa13.16□□□□□ -0.3
COL1A1-203ENST00000471344 RNF212BA8MTL3 300 aa13.16□□□□□ -0.3
COL1A1-203ENST00000471344 PRSS23O95084 383 aa13.16□□□□□ -0.3
COL1A1-203ENST00000471344 ERCC1P07992 297 aaPredicted RBP13.16□□□□□ -0.3
COL1A1-203ENST00000471344 TACSTD2P09758 323 aa13.16□□□□□ -0.3
COL1A1-203ENST00000471344 NCK1P16333 377 aa13.16□□□□□ -0.3
COL1A1-203ENST00000471344 COL8A2P25067 703 aa13.16□□□□□ -0.3
COL1A1-203ENST00000471344 EVX1P49640 407 aa13.16□□□□□ -0.3
COL1A1-203ENST00000471344 GSK3BP49841 420 aa13.16□□□□□ -0.3
COL1A1-203ENST00000471344 ZNF84P51523 738 aa13.16□□□□□ -0.3
COL1A1-203ENST00000471344 CD47Q08722 323 aa13.16□□□□□ -0.3
COL1A1-203ENST00000471344 ST3GAL3Q11203 375 aa13.16□□□□□ -0.3
COL1A1-203ENST00000471344 TMEM255AQ5JRV8 349 aa13.16□□□□□ -0.3
COL1A1-203ENST00000471344 FAM120AOSQ5T036 256 aa13.16□□□□□ -0.3
COL1A1-203ENST00000471344 PODNL1Q6PEZ8 512 aa13.16□□□□□ -0.3
COL1A1-203ENST00000471344 TBPL2Q6SJ96 375 aa13.16□□□□□ -0.3
COL1A1-203ENST00000471344 TSEN54Q7Z6J9 526 aaKnown RBP13.16□□□□□ -0.3
COL1A1-203ENST00000471344 PHC2Q8IXK0 858 aa13.16□□□□□ -0.3
COL1A1-203ENST00000471344 OFCC1Q8IZS5 231 aa13.16□□□□□ -0.3
COL1A1-203ENST00000471344 LRRC75AQ8NAA5 344 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms