RNA–Protein interactions for RNA: ENST00000471260.1

HMGN1-211, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 615 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-211ENST00000471260 ARHGDIGQ99819 225 aa11.76□□□□□ -0.53
HMGN1-211ENST00000471260 PRR14Q9BWN1 585 aa11.76□□□□□ -0.53
HMGN1-211ENST00000471260 GPR35Q9HC97 309 aa11.76□□□□□ -0.53
HMGN1-211ENST00000471260 SEC14L4Q9UDX3 406 aa11.76□□□□□ -0.53
HMGN1-211ENST00000471260 SAMD4AQ9UPU9 718 aaKnown RBP11.76□□□□□ -0.53
HMGN1-211ENST00000471260 HSPE1-MOB4S4R3N1 261 aa11.76□□□□□ -0.53
HMGN1-211ENST00000471260 ALPK2Q86TB3 2170 aa11.76□□□□□ -0.53
HMGN1-211ENST00000471260 VSTM5A8MXK1 200 aa11.75□□□□□ -0.53
HMGN1-211ENST00000471260 ZNF99A8MXY4 864 aaPredicted RBP11.75□□□□□ -0.53
HMGN1-211ENST00000471260 INAFM1C9JVW0 142 aa11.75□□□□□ -0.53
HMGN1-211ENST00000471260 ATP6V1G2-DDX39BF2Z307 99 aa11.75□□□□□ -0.53
HMGN1-211ENST00000471260 CXCR6O00574 342 aa11.75□□□□□ -0.53
HMGN1-211ENST00000471260 TRAF3IP2O43734 574 aaPredicted RBP11.75□□□□□ -0.53
HMGN1-211ENST00000471260 TLX2O43763 284 aaPredicted RBP11.75□□□□□ -0.53
HMGN1-211ENST00000471260 GNAO1P09471 354 aa11.75□□□□□ -0.53
HMGN1-211ENST00000471260 CSF3P09919 207 aa11.75□□□□□ -0.53
HMGN1-211ENST00000471260 CBR1P16152 277 aa11.75□□□□□ -0.53
HMGN1-211ENST00000471260 PTNP21246 168 aa11.75□□□□□ -0.53
HMGN1-211ENST00000471260 PCSK6P29122 969 aa11.75□□□□□ -0.53
HMGN1-211ENST00000471260 PCGF2P35227 344 aa11.75□□□□□ -0.53
HMGN1-211ENST00000471260 ARR3P36575 388 aa11.75□□□□□ -0.53
HMGN1-211ENST00000471260 MAGEA2P43356 314 aa11.75□□□□□ -0.53
HMGN1-211ENST00000471260 EFNA4P52798 201 aa11.75□□□□□ -0.53
HMGN1-211ENST00000471260 IL1RL1Q01638 556 aa11.75□□□□□ -0.53
HMGN1-211ENST00000471260 NAAAQ02083 359 aa11.75□□□□□ -0.53
HMGN1-211ENST00000471260 PMS2P3Q13401 168 aa11.75□□□□□ -0.53
HMGN1-211ENST00000471260 SWI5Q1ZZU3 235 aa11.75□□□□□ -0.53
HMGN1-211ENST00000471260 CEACAM16Q2WEN9 425 aa11.75□□□□□ -0.53
HMGN1-211ENST00000471260 CCDC80Q76M96 950 aa11.75□□□□□ -0.53
HMGN1-211ENST00000471260 PXKQ7Z7A4 578 aa11.75□□□□□ -0.53
HMGN1-211ENST00000471260 CLVS1Q8IUQ0 354 aaPredicted RBP11.75□□□□□ -0.53
HMGN1-211ENST00000471260 TMEM123Q8N131 208 aa11.75□□□□□ -0.53
HMGN1-211ENST00000471260 SETD9Q8NE22 299 aa11.75□□□□□ -0.53
HMGN1-211ENST00000471260 IL17RDQ8NFM7 739 aa11.75□□□□□ -0.53
HMGN1-211ENST00000471260 OR4F15Q8NGB8 312 aa11.75□□□□□ -0.53
HMGN1-211ENST00000471260 OR13F1Q8NGS4 319 aa11.75□□□□□ -0.53
HMGN1-211ENST00000471260 OR10A6Q8NH74 314 aa11.75□□□□□ -0.53
HMGN1-211ENST00000471260 RAB2BQ8WUD1 216 aa11.75□□□□□ -0.53
HMGN1-211ENST00000471260 FAM162AQ96A26 154 aa11.75□□□□□ -0.53
HMGN1-211ENST00000471260 SEPHS2Q99611 448 aa11.75□□□□□ -0.53
HMGN1-211ENST00000471260 WFDC6Q9BQY6 131 aa11.75□□□□□ -0.53
HMGN1-211ENST00000471260 SLC19A3Q9BZV2 496 aa11.75□□□□□ -0.53
HMGN1-211ENST00000471260 NELFAQ9H3P2 528 aa11.75□□□□□ -0.53
HMGN1-211ENST00000471260 NTN4Q9HB63 628 aa11.75□□□□□ -0.53
HMGN1-211ENST00000471260 PLGRKTQ9HBL7 147 aa11.75□□□□□ -0.53
HMGN1-211ENST00000471260 CRLF2Q9HC73 371 aa11.75□□□□□ -0.53
HMGN1-211ENST00000471260 B3GAT2Q9NPZ5 323 aa11.75□□□□□ -0.53
HMGN1-211ENST00000471260 DCAF13Q9NV06 445 aaKnown RBP11.75□□□□□ -0.53
HMGN1-211ENST00000471260 TBCCD1Q9NVR7 557 aa11.75□□□□□ -0.53
HMGN1-211ENST00000471260 ORC6Q9Y5N6 252 aa11.75□□□□□ -0.53
HMGN1-211ENST00000471260 A0A096LPE4 126 aa11.74□□□□□ -0.53
HMGN1-211ENST00000471260 A0A1W2PPZ6 126 aa11.74□□□□□ -0.53
HMGN1-211ENST00000471260 G3V2T6 193 aa11.74□□□□□ -0.53
HMGN1-211ENST00000471260 PLPP3O14495 311 aa11.74□□□□□ -0.53
HMGN1-211ENST00000471260 SNAP29O95721 258 aa11.74□□□□□ -0.53
HMGN1-211ENST00000471260 F12P00748 615 aaPredicted RBP11.74□□□□□ -0.53
HMGN1-211ENST00000471260 CCDC159P0C7I6 412 aa11.74□□□□□ -0.53
HMGN1-211ENST00000471260 CECR9P0C854 216 aa11.74□□□□□ -0.53
HMGN1-211ENST00000471260 SLC25A16P16260 332 aa11.74□□□□□ -0.53
HMGN1-211ENST00000471260 GZMMP51124 257 aa11.74□□□□□ -0.53
HMGN1-211ENST00000471260 ARF1P84077 181 aaKnown RBP11.74□□□□□ -0.53
HMGN1-211ENST00000471260 KRTAP1-1Q07627 177 aa11.74□□□□□ -0.53
HMGN1-211ENST00000471260 SELPLGQ14242 412 aa11.74□□□□□ -0.53
HMGN1-211ENST00000471260 RAB39AQ14964 217 aa11.74□□□□□ -0.53
HMGN1-211ENST00000471260 VMACQ2NL98 169 aa11.74□□□□□ -0.53
HMGN1-211ENST00000471260 ENTPD8Q5MY95 495 aa11.74□□□□□ -0.53
HMGN1-211ENST00000471260 NHLRC1Q6VVB1 395 aa11.74□□□□□ -0.53
HMGN1-211ENST00000471260 ZNF627Q7L945 461 aa11.74□□□□□ -0.53
HMGN1-211ENST00000471260 C20orf196Q8IYI0 205 aa11.74□□□□□ -0.53
HMGN1-211ENST00000471260 DRAXINQ8NBI3 349 aaPredicted RBP11.74□□□□□ -0.53
HMGN1-211ENST00000471260 NUP37Q8NFH4 326 aa11.74□□□□□ -0.53
HMGN1-211ENST00000471260 GPR32P1Q8NGA4 272 aa11.74□□□□□ -0.53
HMGN1-211ENST00000471260 OR6T1Q8NGN1 323 aa11.74□□□□□ -0.53
HMGN1-211ENST00000471260 OR5J2Q8NH18 312 aa11.74□□□□□ -0.53
HMGN1-211ENST00000471260 FAM81AQ8TBF8 368 aa11.74□□□□□ -0.53
HMGN1-211ENST00000471260 C12orf43Q96C57 262 aaKnown RBP11.74□□□□□ -0.53
HMGN1-211ENST00000471260 CA10Q9NS85 328 aa11.74□□□□□ -0.53
HMGN1-211ENST00000471260 ABCA1O95477 2261 aa11.74□□□□□ -0.53
HMGN1-211ENST00000471260 SLC35F4A4IF30 521 aa11.73□□□□□ -0.53
HMGN1-211ENST00000471260 TRAPPC13A5PLN9 417 aa11.73□□□□□ -0.53
HMGN1-211ENST00000471260 ZNF726A6NNF4 738 aa11.73□□□□□ -0.53
HMGN1-211ENST00000471260 B9A039 149 aa11.73□□□□□ -0.53
HMGN1-211ENST00000471260 M0R3H8 397 aa11.73□□□□□ -0.53
HMGN1-211ENST00000471260 SLC16A6O15403 523 aa11.73□□□□□ -0.53
HMGN1-211ENST00000471260 CD5LO43866 347 aa11.73□□□□□ -0.53
HMGN1-211ENST00000471260 SEC14L2O76054 403 aa11.73□□□□□ -0.53
HMGN1-211ENST00000471260 CST1P01037 141 aa11.73□□□□□ -0.53
HMGN1-211ENST00000471260 OPN1SWP03999 348 aa11.73□□□□□ -0.53
HMGN1-211ENST00000471260 CBLP22681 906 aa11.73□□□□□ -0.53
HMGN1-211ENST00000471260 SERPINF1P36955 418 aa11.73□□□□□ -0.53
HMGN1-211ENST00000471260 SNRPD2P62316 118 aaKnown RBP11.73□□□□□ -0.53
HMGN1-211ENST00000471260 POU3F1Q03052 451 aaPredicted RBP11.73□□□□□ -0.53
HMGN1-211ENST00000471260 LOXL1Q08397 574 aaPredicted RBP11.73□□□□□ -0.53
HMGN1-211ENST00000471260 ZP4Q12836 540 aa11.73□□□□□ -0.53
HMGN1-211ENST00000471260 EFNB3Q15768 340 aa11.73□□□□□ -0.53
HMGN1-211ENST00000471260 NPTX1Q15818 432 aa11.73□□□□□ -0.53
HMGN1-211ENST00000471260 MST1LQ2TV78 715 aa11.73□□□□□ -0.53
HMGN1-211ENST00000471260 KCTD8Q6ZWB6 473 aa11.73□□□□□ -0.53
HMGN1-211ENST00000471260 C10orf53Q8N6V4 93 aa11.73□□□□□ -0.53
HMGN1-211ENST00000471260 FBLIM1Q8WUP2 373 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms