RNA–Protein interactions for RNA: ENST00000470171.5

FDPS-208, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 746 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-208ENST00000470171 TMCC3Q9ULS5 477 aa13.4□□□□□ -0.26
FDPS-208ENST00000470171 AURKCQ9UQB9 309 aa13.4□□□□□ -0.26
FDPS-208ENST00000470171 CMAHPQ9Y471 501 aa13.4□□□□□ -0.26
FDPS-208ENST00000470171 PRRC2AP48634 2157 aaKnown RBP13.39□□□□□ -0.27
FDPS-208ENST00000470171 SH3PXD2BA1X283 911 aa13.39□□□□□ -0.27
FDPS-208ENST00000470171 J3KTA2 159 aa13.39□□□□□ -0.27
FDPS-208ENST00000470171 ARPC2O15144 300 aa13.39□□□□□ -0.27
FDPS-208ENST00000470171 SNAP29O95721 258 aa13.39□□□□□ -0.27
FDPS-208ENST00000470171 IGHV4-39P01824 125 aa13.39□□□□□ -0.27
FDPS-208ENST00000470171 HEXAP06865 529 aa13.39□□□□□ -0.27
FDPS-208ENST00000470171 OR4A8P0C604 315 aa13.39□□□□□ -0.27
FDPS-208ENST00000470171 ZNF35P13682 527 aa13.39□□□□□ -0.27
FDPS-208ENST00000470171 SLC25A16P16260 332 aa13.39□□□□□ -0.27
FDPS-208ENST00000470171 MAKP20794 623 aa13.39□□□□□ -0.27
FDPS-208ENST00000470171 PCSK6P29122 969 aa13.39□□□□□ -0.27
FDPS-208ENST00000470171 RPL4P36578 427 aaKnown RBP13.39□□□□□ -0.27
FDPS-208ENST00000470171 ACVR1BP36896 505 aa13.39□□□□□ -0.27
FDPS-208ENST00000470171 GIPRP48546 466 aa13.39□□□□□ -0.27
FDPS-208ENST00000470171 PTDSS1P48651 473 aaKnown RBP13.39□□□□□ -0.27
FDPS-208ENST00000470171 ADIPOQQ15848 244 aa13.39□□□□□ -0.27
FDPS-208ENST00000470171 FAM27BQ5VT28 67 aa13.39□□□□□ -0.27
FDPS-208ENST00000470171 PODNL1Q6PEZ8 512 aa13.39□□□□□ -0.27
FDPS-208ENST00000470171 ADCK1Q86TW2 530 aa13.39□□□□□ -0.27
FDPS-208ENST00000470171 SKA3Q8IX90 412 aa13.39□□□□□ -0.27
FDPS-208ENST00000470171 ALDH16A1Q8IZ83 802 aa13.39□□□□□ -0.27
FDPS-208ENST00000470171 RNF148Q8N7C7 305 aa13.39□□□□□ -0.27
FDPS-208ENST00000470171 LRRC75AQ8NAA5 344 aa13.39□□□□□ -0.27
FDPS-208ENST00000470171 OR51A7Q8NH64 312 aa13.39□□□□□ -0.27
FDPS-208ENST00000470171 NEU4Q8WWR8 484 aaPredicted RBP13.39□□□□□ -0.27
FDPS-208ENST00000470171 ZNF75AQ96N20 296 aa13.39□□□□□ -0.27
FDPS-208ENST00000470171 TNFRSF13CQ96RJ3 184 aa13.39□□□□□ -0.27
FDPS-208ENST00000470171 MS4A5Q9H3V2 200 aa13.39□□□□□ -0.27
FDPS-208ENST00000470171 MAGIXQ9H6Y5 334 aa13.39□□□□□ -0.27
FDPS-208ENST00000470171 RNF121Q9H920 327 aa13.39□□□□□ -0.27
FDPS-208ENST00000470171 FAM53CQ9NYF3 392 aa13.39□□□□□ -0.27
FDPS-208ENST00000470171 GMPR2Q9P2T1 348 aaKnown RBP13.39□□□□□ -0.27
FDPS-208ENST00000470171 RHCGQ9UBD6 479 aa13.39□□□□□ -0.27
FDPS-208ENST00000470171 ADAM21Q9UKJ8 722 aa13.39□□□□□ -0.27
FDPS-208ENST00000470171 ZNF346Q9UL40 294 aaKnown RBP13.39□□□□□ -0.27
FDPS-208ENST00000470171 H7C1Q1 480 aa13.38□□□□□ -0.27
FDPS-208ENST00000470171 IMPA2O14732 288 aa13.38□□□□□ -0.27
FDPS-208ENST00000470171 PTP4A3O75365 173 aa13.38□□□□□ -0.27
FDPS-208ENST00000470171 GADD45GO95257 159 aa13.38□□□□□ -0.27
FDPS-208ENST00000470171 SEMG1P04279 462 aa13.38□□□□□ -0.27
FDPS-208ENST00000470171 TCN1P20061 433 aaPredicted RBP13.38□□□□□ -0.27
FDPS-208ENST00000470171 TUBG1P23258 451 aa13.38□□□□□ -0.27
FDPS-208ENST00000470171 RAD52P43351 418 aa13.38□□□□□ -0.27
FDPS-208ENST00000470171 RPS6KA3P51812 740 aa13.38□□□□□ -0.27
FDPS-208ENST00000470171 HMGA2P52926 109 aa13.38□□□□□ -0.27
FDPS-208ENST00000470171 TUBA1BP68363 451 aa13.38□□□□□ -0.27
FDPS-208ENST00000470171 TUBA4AP68366 448 aa13.38□□□□□ -0.27
FDPS-208ENST00000470171 HGFACQ04756 655 aa13.38□□□□□ -0.27
FDPS-208ENST00000470171 CD47Q08722 323 aa13.38□□□□□ -0.27
FDPS-208ENST00000470171 TRIM25Q14258 630 aaKnown RBP13.38□□□□□ -0.27
FDPS-208ENST00000470171 FGD3Q5JSP0 725 aa13.38□□□□□ -0.27
FDPS-208ENST00000470171 CLEC9AQ6UXN8 241 aa13.38□□□□□ -0.27
FDPS-208ENST00000470171 DPY19L2P2Q6ZN68 376 aa13.38□□□□□ -0.27
FDPS-208ENST00000470171 TUBA1AQ71U36 451 aa13.38□□□□□ -0.27
FDPS-208ENST00000470171 OR4K5Q8NGD3 323 aa13.38□□□□□ -0.27
FDPS-208ENST00000470171 ZNF519Q8TB69 540 aa13.38□□□□□ -0.27
FDPS-208ENST00000470171 NMD3Q96D46 503 aaKnown RBP13.38□□□□□ -0.27
FDPS-208ENST00000470171 BCL2L14Q9BZR8 327 aa13.38□□□□□ -0.27
FDPS-208ENST00000470171 NOX3Q9HBY0 568 aa13.38□□□□□ -0.27
FDPS-208ENST00000470171 CCNB1IP1Q9NPC3 277 aa13.38□□□□□ -0.27
FDPS-208ENST00000470171 TUBG2Q9NRH3 451 aa13.38□□□□□ -0.27
FDPS-208ENST00000470171 FREM1Q5H8C1 2179 aa13.38□□□□□ -0.27
FDPS-208ENST00000470171 RAI1Q7Z5J4 1906 aaPredicted RBP13.37□□□□□ -0.27
FDPS-208ENST00000470171 IDH3BO43837 385 aa13.37□□□□□ -0.27
FDPS-208ENST00000470171 PIP5K1CO60331 668 aa13.37□□□□□ -0.27
FDPS-208ENST00000470171 CST2P09228 141 aa13.37□□□□□ -0.27
FDPS-208ENST00000470171 CALCRP30988 508 aa13.37□□□□□ -0.27
FDPS-208ENST00000470171 SDHAP31040 664 aa13.37□□□□□ -0.27
FDPS-208ENST00000470171 OMPP47874 163 aa13.37□□□□□ -0.27
FDPS-208ENST00000470171 LIMS1P48059 325 aa13.37□□□□□ -0.27
FDPS-208ENST00000470171 VLDLRP98155 873 aa13.37□□□□□ -0.27
FDPS-208ENST00000470171 PIGFQ07326 219 aa13.37□□□□□ -0.27
FDPS-208ENST00000470171 TBC1D28Q2M2D7 210 aa13.37□□□□□ -0.27
FDPS-208ENST00000470171 MST1LQ2TV78 715 aa13.37□□□□□ -0.27
FDPS-208ENST00000470171 RPL13AP3Q6NVV1 102 aa13.37□□□□□ -0.27
FDPS-208ENST00000470171 PGM2L1Q6PCE3 622 aa13.37□□□□□ -0.27
FDPS-208ENST00000470171 SLC25A47Q6Q0C1 308 aa13.37□□□□□ -0.27
FDPS-208ENST00000470171 ARL9Q6T311 187 aa13.37□□□□□ -0.27
FDPS-208ENST00000470171 FOXL2NBQ6ZUU3 175 aa13.37□□□□□ -0.27
FDPS-208ENST00000470171 TSEN54Q7Z6J9 526 aaKnown RBP13.37□□□□□ -0.27
FDPS-208ENST00000470171 DHFR2Q86XF0 187 aa13.37□□□□□ -0.27
FDPS-208ENST00000470171 SYT14Q8NB59 555 aa13.37□□□□□ -0.27
FDPS-208ENST00000470171 RBM15BQ8NDT2 890 aaKnown RBP13.37□□□□□ -0.27
FDPS-208ENST00000470171 OR10H5Q8NGA6 315 aa13.37□□□□□ -0.27
FDPS-208ENST00000470171 IPCEF1Q8WWN9 437 aaPredicted RBP13.37□□□□□ -0.27
FDPS-208ENST00000470171 HDAC2Q92769 488 aaKnown RBP13.37□□□□□ -0.27
FDPS-208ENST00000470171 FBXO17Q96EF6 278 aa13.37□□□□□ -0.27
FDPS-208ENST00000470171 REG4Q9BYZ8 158 aa13.37□□□□□ -0.27
FDPS-208ENST00000470171 TRIM15Q9C019 465 aa13.37□□□□□ -0.27
FDPS-208ENST00000470171 NRIP3Q9NQ35 241 aa13.37□□□□□ -0.27
FDPS-208ENST00000470171 ZNF224Q9NZL3 707 aa13.37□□□□□ -0.27
FDPS-208ENST00000470171 SIGLEC7Q9Y286 467 aa13.37□□□□□ -0.27
FDPS-208ENST00000470171 TIMM10BQ9Y5J6 103 aa13.37□□□□□ -0.27
FDPS-208ENST00000470171 TRAV27A0A087WT01 109 aa13.36□□□□□ -0.27
FDPS-208ENST00000470171 C12orf71A8MTZ7 269 aa13.36□□□□□ -0.27
FDPS-208ENST00000470171 hCG_2039718K7EN88 272 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 86.4 ms