RNA–Protein interactions for RNA: ENST00000470026.5

BRCA1-209, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-209ENST00000470026 RNF128Q8TEB7 428 aa12.33□□□□□ -0.44
BRCA1-209ENST00000470026 ELMOD3Q96FG2 381 aa12.33□□□□□ -0.44
BRCA1-209ENST00000470026 WDR89Q96FK6 387 aaPredicted RBP12.33□□□□□ -0.44
BRCA1-209ENST00000470026 KLHDC7BQ96G42 594 aa12.33□□□□□ -0.44
BRCA1-209ENST00000470026 OPN4Q9UHM6 478 aa12.33□□□□□ -0.44
BRCA1-209ENST00000470026 PPIEQ9UNP9 301 aaKnown RBP12.33□□□□□ -0.44
BRCA1-209ENST00000470026 B9D1Q9UPM9 204 aa12.33□□□□□ -0.44
BRCA1-209ENST00000470026 THADAQ6YHU6 1953 aa12.33□□□□□ -0.44
BRCA1-209ENST00000470026 CPAMD8Q8IZJ3 1885 aa12.33□□□□□ -0.44
BRCA1-209ENST00000470026 L7N2F9 121 aa12.32□□□□□ -0.44
BRCA1-209ENST00000470026 TO15178 435 aa12.32□□□□□ -0.44
BRCA1-209ENST00000470026 CDC40O60508 579 aaKnown RBP eCLIP12.32□□□□□ -0.44
BRCA1-209ENST00000470026 EIF4E2O60573 245 aaKnown RBP12.32□□□□□ -0.44
BRCA1-209ENST00000470026 ICOSLGO75144 302 aa12.32□□□□□ -0.44
BRCA1-209ENST00000470026 NPIPB7O75200 414 aa12.32□□□□□ -0.44
BRCA1-209ENST00000470026 GPANK1O95872 356 aa12.32□□□□□ -0.44
BRCA1-209ENST00000470026 MT-ATP6P00846 226 aa12.32□□□□□ -0.44
BRCA1-209ENST00000470026 ITGA5P08648 1049 aa12.32□□□□□ -0.44
BRCA1-209ENST00000470026 CALCRP30988 508 aa12.32□□□□□ -0.44
BRCA1-209ENST00000470026 RPS27P42677 84 aaKnown RBP12.32□□□□□ -0.44
BRCA1-209ENST00000470026 POU3F4P49335 361 aa12.32□□□□□ -0.44
BRCA1-209ENST00000470026 CENPAP49450 140 aa12.32□□□□□ -0.44
BRCA1-209ENST00000470026 SGCBQ16585 318 aa12.32□□□□□ -0.44
BRCA1-209ENST00000470026 B3GNTL1Q67FW5 361 aaPredicted RBP12.32□□□□□ -0.44
BRCA1-209ENST00000470026 LRRC69Q6ZNQ3 347 aa12.32□□□□□ -0.44
BRCA1-209ENST00000470026 GPAT4Q86UL3 456 aa12.32□□□□□ -0.44
BRCA1-209ENST00000470026 ZNF679Q8IYX0 411 aa12.32□□□□□ -0.44
BRCA1-209ENST00000470026 OR1F2PQ96R84 312 aa12.32□□□□□ -0.44
BRCA1-209ENST00000470026 ELF4Q99607 663 aaPredicted RBP12.32□□□□□ -0.44
BRCA1-209ENST00000470026 REG4Q9BYZ8 158 aa12.32□□□□□ -0.44
BRCA1-209ENST00000470026 ULBP3Q9BZM4 244 aa12.32□□□□□ -0.44
BRCA1-209ENST00000470026 ALX4Q9H161 411 aaPredicted RBP12.32□□□□□ -0.44
BRCA1-209ENST00000470026 ELOVL3Q9HB03 270 aa12.32□□□□□ -0.44
BRCA1-209ENST00000470026 VSX1Q9NZR4 365 aaPredicted RBP12.32□□□□□ -0.44
BRCA1-209ENST00000470026 IGLV1-36A0A0B4J1U3 117 aa12.32□□□□□ -0.44
BRCA1-209ENST00000470026 IGHV5-51A0A0C4DH38 117 aa12.32□□□□□ -0.44
BRCA1-209ENST00000470026 LOC100289279A0A1B0GTE1 492 aa12.32□□□□□ -0.44
BRCA1-209ENST00000470026 PRSS37A4D1T9 235 aa12.32□□□□□ -0.44
BRCA1-209ENST00000470026 SUSD5O60279 629 aa12.32□□□□□ -0.44
BRCA1-209ENST00000470026 TSPAN2O60636 221 aa12.32□□□□□ -0.44
BRCA1-209ENST00000470026 B3GALNT1O75752 331 aa12.32□□□□□ -0.44
BRCA1-209ENST00000470026 IGHMP01871 453 aa12.32□□□□□ -0.44
BRCA1-209ENST00000470026 DCAF7P61962 342 aa12.32□□□□□ -0.44
BRCA1-209ENST00000470026 MPPED2Q15777 294 aa12.32□□□□□ -0.44
BRCA1-209ENST00000470026 TMEM65Q6PI78 240 aa12.32□□□□□ -0.44
BRCA1-209ENST00000470026 NHLRC1Q6VVB1 395 aa12.32□□□□□ -0.44
BRCA1-209ENST00000470026 GLRX5Q86SX6 157 aa12.32□□□□□ -0.44
BRCA1-209ENST00000470026 SLC38A6Q8IZM9 456 aa12.32□□□□□ -0.44
BRCA1-209ENST00000470026 CLEC1AQ8NC01 280 aa12.32□□□□□ -0.44
BRCA1-209ENST00000470026 OR52B4Q8NGK2 314 aa12.32□□□□□ -0.44
BRCA1-209ENST00000470026 GPX8Q8TED1 209 aa12.32□□□□□ -0.44
BRCA1-209ENST00000470026 ASB13Q8WXK3 278 aa12.32□□□□□ -0.44
BRCA1-209ENST00000470026 ATOH1Q92858 354 aaPredicted RBP12.32□□□□□ -0.44
BRCA1-209ENST00000470026 SLC25A28Q96A46 364 aa12.32□□□□□ -0.44
BRCA1-209ENST00000470026 C8orf44Q96CB5 159 aa12.32□□□□□ -0.44
BRCA1-209ENST00000470026 ADOQ96SZ5 270 aa12.32□□□□□ -0.44
BRCA1-209ENST00000470026 PNO1Q9NRX1 252 aaKnown RBP12.32□□□□□ -0.44
BRCA1-209ENST00000470026 EPHA6Q9UF33 1036 aa12.32□□□□□ -0.44
BRCA1-209ENST00000470026 CYP8B1Q9UNU6 501 aa12.32□□□□□ -0.44
BRCA1-209ENST00000470026 UBE2QL1A1L167 161 aa12.31□□□□□ -0.44
BRCA1-209ENST00000470026 TLCD2A6NGC4 264 aa12.31□□□□□ -0.44
BRCA1-209ENST00000470026 ALG1L2C9J202 215 aa12.31□□□□□ -0.44
BRCA1-209ENST00000470026 DXOO77932 396 aaKnown RBP12.31□□□□□ -0.44
BRCA1-209ENST00000470026 HRGP04196 525 aa12.31□□□□□ -0.44
BRCA1-209ENST00000470026 AKAIN1P0CW23 69 aa12.31□□□□□ -0.44
BRCA1-209ENST00000470026 MAP2K6P52564 334 aa12.31□□□□□ -0.44
BRCA1-209ENST00000470026 H2BFSP57053 126 aa12.31□□□□□ -0.44
BRCA1-209ENST00000470026 RPL27P61353 136 aaKnown RBP12.31□□□□□ -0.44
BRCA1-209ENST00000470026 SEC61A1P61619 476 aaKnown RBP12.31□□□□□ -0.44
BRCA1-209ENST00000470026 INSM1Q01101 510 aaPredicted RBP12.31□□□□□ -0.44
BRCA1-209ENST00000470026 BAMBIQ13145 260 aa12.31□□□□□ -0.44
BRCA1-209ENST00000470026 TOMM34Q15785 309 aaPredicted RBP12.31□□□□□ -0.44
BRCA1-209ENST00000470026 RAB11BQ15907 218 aa12.31□□□□□ -0.44
BRCA1-209ENST00000470026 MEP1BQ16820 701 aa12.31□□□□□ -0.44
BRCA1-209ENST00000470026 C2orf76Q3KRA6 126 aa12.31□□□□□ -0.44
BRCA1-209ENST00000470026 WDR45BQ5MNZ6 344 aa12.31□□□□□ -0.44
BRCA1-209ENST00000470026 C1QL3Q5VWW1 255 aa12.31□□□□□ -0.44
BRCA1-209ENST00000470026 MAMDC2Q7Z304 686 aaPredicted RBP12.31□□□□□ -0.44
BRCA1-209ENST00000470026 FAM160A2Q8N612 972 aaPredicted RBP12.31□□□□□ -0.44
BRCA1-209ENST00000470026 OR4D10Q8NGI6 311 aa12.31□□□□□ -0.44
BRCA1-209ENST00000470026 PCNPQ8WW12 178 aaKnown RBP12.31□□□□□ -0.44
BRCA1-209ENST00000470026 RBPMSQ93062 196 aaKnown RBP12.31□□□□□ -0.44
BRCA1-209ENST00000470026 FAM3DQ96BQ1 224 aa12.31□□□□□ -0.44
BRCA1-209ENST00000470026 GINS4Q9BRT9 223 aa12.31□□□□□ -0.44
BRCA1-209ENST00000470026 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.31□□□□□ -0.44
BRCA1-209ENST00000470026 SEMA4CQ9C0C4 833 aa12.31□□□□□ -0.44
BRCA1-209ENST00000470026 C1orf198Q9H425 327 aa12.31□□□□□ -0.44
BRCA1-209ENST00000470026 PDE7BQ9NP56 450 aa12.31□□□□□ -0.44
BRCA1-209ENST00000470026 MRPL22Q9NWU5 206 aaKnown RBP12.31□□□□□ -0.44
BRCA1-209ENST00000470026 TMEM150CB9EJG8 249 aa12.31□□□□□ -0.44
BRCA1-209ENST00000470026 SULT1C2O00338 296 aa12.31□□□□□ -0.44
BRCA1-209ENST00000470026 KDM4BO94953 1096 aa12.31□□□□□ -0.44
BRCA1-209ENST00000470026 PNPP00491 289 aa12.31□□□□□ -0.44
BRCA1-209ENST00000470026 IGFBP3P17936 291 aaPredicted RBP12.31□□□□□ -0.44
BRCA1-209ENST00000470026 FSTP19883 344 aa12.31□□□□□ -0.44
BRCA1-209ENST00000470026 CXCR1P25024 350 aa12.31□□□□□ -0.44
BRCA1-209ENST00000470026 GFERP55789 205 aa12.31□□□□□ -0.44
BRCA1-209ENST00000470026 HLXQ14774 488 aaPredicted RBP12.31□□□□□ -0.44
BRCA1-209ENST00000470026 EBPQ15125 230 aaKnown RBP12.31□□□□□ -0.44
BRCA1-209ENST00000470026 C2orf68Q2NKX9 166 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms