RNA–Protein interactions for RNA: ENST00000470006.1

NCKIPSD-209, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 2

Gene NCKIPSD, Length 814 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-209ENST00000470006 SLC47A1Q96FL8 570 aa16■□□□□ 0.15
NCKIPSD-209ENST00000470006 MOGAT1Q96PD6 335 aa16■□□□□ 0.15
NCKIPSD-209ENST00000470006 NUF2Q9BZD4 464 aa16■□□□□ 0.15
NCKIPSD-209ENST00000470006 MRPL39Q9NYK5 338 aaKnown RBP16■□□□□ 0.15
NCKIPSD-209ENST00000470006 EIF3KQ9UBQ5 218 aaKnown RBP16■□□□□ 0.15
NCKIPSD-209ENST00000470006 TANC2Q9HCD6 1990 aa16■□□□□ 0.15
NCKIPSD-209ENST00000470006 WDR91A4D1P6 747 aa15.99■□□□□ 0.15
NCKIPSD-209ENST00000470006 LRRN3E7EW58 273 aa15.99■□□□□ 0.15
NCKIPSD-209ENST00000470006 PLPP3O14495 311 aa15.99■□□□□ 0.15
NCKIPSD-209ENST00000470006 TM9SF1O15321 606 aa15.99■□□□□ 0.15
NCKIPSD-209ENST00000470006 HTR2AP28223 471 aa15.99■□□□□ 0.15
NCKIPSD-209ENST00000470006 FBLN7Q53RD9 439 aa15.99■□□□□ 0.15
NCKIPSD-209ENST00000470006 ESCO2Q56NI9 601 aa15.99■□□□□ 0.15
NCKIPSD-209ENST00000470006 CEP85LQ5SZL2 805 aa15.99■□□□□ 0.15
NCKIPSD-209ENST00000470006 ULK3Q6PHR2 472 aa15.99■□□□□ 0.15
NCKIPSD-209ENST00000470006 LRRC18Q8N456 261 aa15.99■□□□□ 0.15
NCKIPSD-209ENST00000470006 IPCEF1Q8WWN9 437 aaPredicted RBP15.99■□□□□ 0.15
NCKIPSD-209ENST00000470006 TMEM54Q969K7 222 aa15.99■□□□□ 0.15
NCKIPSD-209ENST00000470006 SLC35B4Q969S0 331 aa15.99■□□□□ 0.15
NCKIPSD-209ENST00000470006 ZNF566Q969W8 418 aa15.99■□□□□ 0.15
NCKIPSD-209ENST00000470006 CITED1Q99966 193 aa15.99■□□□□ 0.15
NCKIPSD-209ENST00000470006 RBM4BQ9BQ04 359 aaKnown RBP15.99■□□□□ 0.15
NCKIPSD-209ENST00000470006 PATZ1Q9HBE1 687 aaKnown RBP15.99■□□□□ 0.15
NCKIPSD-209ENST00000470006 SLC6A13Q9NSD5 602 aa15.99■□□□□ 0.15
NCKIPSD-209ENST00000470006 ZSCAN5BA6NJL1 495 aa15.98■□□□□ 0.15
NCKIPSD-209ENST00000470006 C5orf58C9J3I9 102 aa15.98■□□□□ 0.15
NCKIPSD-209ENST00000470006 DHHO43323 396 aa15.98■□□□□ 0.15
NCKIPSD-209ENST00000470006 MFN2O95140 757 aa15.98■□□□□ 0.15
NCKIPSD-209ENST00000470006 IGHV2-70P01814 119 aa15.98■□□□□ 0.15
NCKIPSD-209ENST00000470006 IL12AP29459 219 aa15.98■□□□□ 0.15
NCKIPSD-209ENST00000470006 MPV17P39210 176 aa15.98■□□□□ 0.15
NCKIPSD-209ENST00000470006 SLC6A9P48067 706 aa15.98■□□□□ 0.15
NCKIPSD-209ENST00000470006 MMP15P51511 669 aa15.98■□□□□ 0.15
NCKIPSD-209ENST00000470006 MVDP53602 400 aa15.98■□□□□ 0.15
NCKIPSD-209ENST00000470006 FIP1L1Q6UN15 594 aaKnown RBP15.98■□□□□ 0.15
NCKIPSD-209ENST00000470006 NHLRC1Q6VVB1 395 aa15.98■□□□□ 0.15
NCKIPSD-209ENST00000470006 SLC35D2Q76EJ3 337 aa15.98■□□□□ 0.15
NCKIPSD-209ENST00000470006 LSMEM1Q8N8F7 131 aa15.98■□□□□ 0.15
NCKIPSD-209ENST00000470006 HIPK4Q8NE63 616 aa15.98■□□□□ 0.15
NCKIPSD-209ENST00000470006 OR6S1Q8NH40 331 aa15.98■□□□□ 0.15
NCKIPSD-209ENST00000470006 NANOGQ9H9S0 305 aa15.98■□□□□ 0.15
NCKIPSD-209ENST00000470006 TPT1P8Q9HAU6 139 aa15.98■□□□□ 0.15
NCKIPSD-209ENST00000470006 CYSLTR2Q9NS75 346 aa15.98■□□□□ 0.15
NCKIPSD-209ENST00000470006 DCAF16Q9NXF7 216 aa15.98■□□□□ 0.15
NCKIPSD-209ENST00000470006 THUMPD1Q9NXG2 353 aaKnown RBP15.98■□□□□ 0.15
NCKIPSD-209ENST00000470006 TRIM33Q9UPN9 1127 aa15.98■□□□□ 0.15
NCKIPSD-209ENST00000470006 POLR3KQ9Y2Y1 108 aaPredicted RBP15.98■□□□□ 0.15
NCKIPSD-209ENST00000470006 TRAV40A0A0B4J280 105 aa15.97■□□□□ 0.15
NCKIPSD-209ENST00000470006 TGDSO95455 350 aa15.97■□□□□ 0.15
NCKIPSD-209ENST00000470006 QDPRP09417 244 aa15.97■□□□□ 0.15
NCKIPSD-209ENST00000470006 CD80P33681 288 aa15.97■□□□□ 0.15
NCKIPSD-209ENST00000470006 RBMXP38159 391 aaKnown RBP15.97■□□□□ 0.15
NCKIPSD-209ENST00000470006 RPL14P50914 215 aaKnown RBP15.97■□□□□ 0.15
NCKIPSD-209ENST00000470006 ABCE1P61221 599 aaKnown RBP15.97■□□□□ 0.15
NCKIPSD-209ENST00000470006 TNFAIP6P98066 277 aaPredicted RBP15.97■□□□□ 0.15
NCKIPSD-209ENST00000470006 SPRNQ5BIV9 151 aa15.97■□□□□ 0.15
NCKIPSD-209ENST00000470006 FAM91A1Q658Y4 838 aa15.97■□□□□ 0.15
NCKIPSD-209ENST00000470006 LRFN4Q6PJG9 635 aa15.97■□□□□ 0.15
NCKIPSD-209ENST00000470006 BTNL3Q6UXE8 466 aa15.97■□□□□ 0.15
NCKIPSD-209ENST00000470006 UNQ6126/PRO20091Q6UXV3 157 aa15.97■□□□□ 0.15
NCKIPSD-209ENST00000470006 RHOUQ7L0Q8 258 aa15.97■□□□□ 0.15
NCKIPSD-209ENST00000470006 OR6X1Q8NH79 312 aa15.97■□□□□ 0.15
NCKIPSD-209ENST00000470006 PKNOX2Q96KN3 472 aa15.97■□□□□ 0.15
NCKIPSD-209ENST00000470006 SLC30A2Q9BRI3 323 aa15.97■□□□□ 0.15
NCKIPSD-209ENST00000470006 KCNN2Q9H2S1 579 aa15.97■□□□□ 0.15
NCKIPSD-209ENST00000470006 TMEM27Q9HBJ8 222 aa15.97■□□□□ 0.15
NCKIPSD-209ENST00000470006 TMEM106BQ9NUM4 274 aa15.97■□□□□ 0.15
NCKIPSD-209ENST00000470006 ZDHHC8Q9ULC8 765 aa15.97■□□□□ 0.15
NCKIPSD-209ENST00000470006 RAP2CQ9Y3L5 183 aa15.97■□□□□ 0.15
NCKIPSD-209ENST00000470006 CLPSL1A2RUU4 121 aa15.96■□□□□ 0.15
NCKIPSD-209ENST00000470006 ALDOCP09972 364 aaKnown RBP15.96■□□□□ 0.15
NCKIPSD-209ENST00000470006 LIPAP38571 399 aa15.96■□□□□ 0.15
NCKIPSD-209ENST00000470006 ZNF84P51523 738 aa15.96■□□□□ 0.15
NCKIPSD-209ENST00000470006 PAX8Q06710 450 aa15.96■□□□□ 0.15
NCKIPSD-209ENST00000470006 MELKQ14680 651 aa15.96■□□□□ 0.15
NCKIPSD-209ENST00000470006 ZMAT1Q5H9K5 638 aa15.96■□□□□ 0.15
NCKIPSD-209ENST00000470006 C9orf139Q6ZV77 190 aa15.96■□□□□ 0.15
NCKIPSD-209ENST00000470006 OR5J2Q8NH18 312 aa15.96■□□□□ 0.15
NCKIPSD-209ENST00000470006 BBS10Q8TAM1 723 aa15.96■□□□□ 0.15
NCKIPSD-209ENST00000470006 SLC25A40Q8TBP6 338 aa15.96■□□□□ 0.15
NCKIPSD-209ENST00000470006 MAL2Q969L2 176 aa15.96■□□□□ 0.15
NCKIPSD-209ENST00000470006 SLC19A3Q9BZV2 496 aa15.96■□□□□ 0.15
NCKIPSD-209ENST00000470006 OR2J1Q9GZK6 312 aa15.96■□□□□ 0.15
NCKIPSD-209ENST00000470006 MARCH7Q9H992 704 aa15.96■□□□□ 0.15
NCKIPSD-209ENST00000470006 MSL2Q9HCI7 577 aa15.96■□□□□ 0.15
NCKIPSD-209ENST00000470006 SRRM5B3KS81 715 aa15.95■□□□□ 0.14
NCKIPSD-209ENST00000470006 RNF13O43567 381 aa15.95■□□□□ 0.14
NCKIPSD-209ENST00000470006 NGFP01138 241 aa15.95■□□□□ 0.14
NCKIPSD-209ENST00000470006 STOMP27105 288 aa15.95■□□□□ 0.14
NCKIPSD-209ENST00000470006 CLRN1P58418 232 aa15.95■□□□□ 0.14
NCKIPSD-209ENST00000470006 BTG1P62324 171 aa15.95■□□□□ 0.14
NCKIPSD-209ENST00000470006 TAF9Q16594 264 aa15.95■□□□□ 0.14
NCKIPSD-209ENST00000470006 DEFB112Q30KQ8 113 aa15.95■□□□□ 0.14
NCKIPSD-209ENST00000470006 GTDC1Q4AE62 458 aa15.95■□□□□ 0.14
NCKIPSD-209ENST00000470006 TMEM155Q4W5P6 130 aa15.95■□□□□ 0.14
NCKIPSD-209ENST00000470006 PABPC1L2AQ5JQF8 200 aa15.95■□□□□ 0.14
NCKIPSD-209ENST00000470006 ASPHD2Q6ICH7 369 aa15.95■□□□□ 0.14
NCKIPSD-209ENST00000470006 FAM110DQ8TAY7 271 aaPredicted RBP15.95■□□□□ 0.14
NCKIPSD-209ENST00000470006 KLF14Q8TD94 323 aaPredicted RBP15.95■□□□□ 0.14
NCKIPSD-209ENST00000470006 MARS2Q96GW9 593 aaKnown RBP15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms