RNA–Protein interactions for RNA: ENST00000469778.1

SPTLC1-204, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 2

Gene SPTLC1, Length 490 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-204ENST00000469778 ZNF3P17036 446 aa11.08□□□□□ -0.64
SPTLC1-204ENST00000469778 PAICSP22234 425 aaKnown RBP11.08□□□□□ -0.64
SPTLC1-204ENST00000469778 POU1F1P28069 291 aa11.08□□□□□ -0.64
SPTLC1-204ENST00000469778 GRNP28799 593 aaKnown RBP11.08□□□□□ -0.64
SPTLC1-204ENST00000469778 PTDSS1P48651 473 aaKnown RBP11.08□□□□□ -0.64
SPTLC1-204ENST00000469778 SLC25A1P53007 311 aa11.08□□□□□ -0.64
SPTLC1-204ENST00000469778 NR1H2P55055 460 aa11.08□□□□□ -0.64
SPTLC1-204ENST00000469778 UBE2NP61088 152 aaKnown RBP11.08□□□□□ -0.64
SPTLC1-204ENST00000469778 RIPK1Q13546 671 aa11.08□□□□□ -0.64
SPTLC1-204ENST00000469778 GINS1Q14691 196 aa11.08□□□□□ -0.64
SPTLC1-204ENST00000469778 PPA1Q15181 289 aa11.08□□□□□ -0.64
SPTLC1-204ENST00000469778 RCN1Q15293 331 aa11.08□□□□□ -0.64
SPTLC1-204ENST00000469778 PGGHGQ32M88 737 aa11.08□□□□□ -0.64
SPTLC1-204ENST00000469778 MESTQ5EB52 335 aa11.08□□□□□ -0.64
SPTLC1-204ENST00000469778 CLEC12AQ5QGZ9 265 aa11.08□□□□□ -0.64
SPTLC1-204ENST00000469778 PHYHD1Q5SRE7 291 aa11.08□□□□□ -0.64
SPTLC1-204ENST00000469778 FAM27BQ5VT28 67 aa11.08□□□□□ -0.64
SPTLC1-204ENST00000469778 ZNF813Q6ZN06 617 aa11.08□□□□□ -0.64
SPTLC1-204ENST00000469778 LINGO2Q7L985 606 aa11.08□□□□□ -0.64
SPTLC1-204ENST00000469778 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.08□□□□□ -0.64
SPTLC1-204ENST00000469778 SYT9Q86SS6 491 aa11.08□□□□□ -0.64
SPTLC1-204ENST00000469778 IL17RDQ8NFM7 739 aa11.08□□□□□ -0.64
SPTLC1-204ENST00000469778 OR8D4Q8NGM9 314 aa11.08□□□□□ -0.64
SPTLC1-204ENST00000469778 OR2T4Q8NH00 348 aa11.08□□□□□ -0.64
SPTLC1-204ENST00000469778 C14orf79Q96F83 325 aa11.08□□□□□ -0.64
SPTLC1-204ENST00000469778 FOXB1Q99853 325 aa11.08□□□□□ -0.64
SPTLC1-204ENST00000469778 PLA2G12AQ9BZM1 189 aa11.08□□□□□ -0.64
SPTLC1-204ENST00000469778 KCNN2Q9H2S1 579 aa11.08□□□□□ -0.64
SPTLC1-204ENST00000469778 SLC17A5Q9NRA2 495 aa11.08□□□□□ -0.64
SPTLC1-204ENST00000469778 CMC2Q9NRP2 79 aa11.08□□□□□ -0.64
SPTLC1-204ENST00000469778 TMEM38BQ9NVV0 291 aa11.08□□□□□ -0.64
SPTLC1-204ENST00000469778 FKBP7Q9Y680 259 aa11.08□□□□□ -0.64
SPTLC1-204ENST00000469778 FREM1Q5H8C1 2179 aa11.07□□□□□ -0.64
SPTLC1-204ENST00000469778 SAC3D1A6NKF1 404 aa11.07□□□□□ -0.64
SPTLC1-204ENST00000469778 RAD51DO75771 328 aa11.07□□□□□ -0.64
SPTLC1-204ENST00000469778 SOX14O95416 240 aa11.07□□□□□ -0.64
SPTLC1-204ENST00000469778 CRYGSP22914 178 aa11.07□□□□□ -0.64
SPTLC1-204ENST00000469778 CCKARP32238 428 aa11.07□□□□□ -0.64
SPTLC1-204ENST00000469778 ARR3P36575 388 aa11.07□□□□□ -0.64
SPTLC1-204ENST00000469778 CDKN2AP42771 156 aaKnown RBP11.07□□□□□ -0.64
SPTLC1-204ENST00000469778 PCBD1P61457 104 aa11.07□□□□□ -0.64
SPTLC1-204ENST00000469778 GLO1Q04760 184 aa11.07□□□□□ -0.64
SPTLC1-204ENST00000469778 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.07□□□□□ -0.64
SPTLC1-204ENST00000469778 LGALS3BPQ08380 585 aa11.07□□□□□ -0.64
SPTLC1-204ENST00000469778 NPRL3Q12980 569 aa11.07□□□□□ -0.64
SPTLC1-204ENST00000469778 PTGES3Q15185 160 aaKnown RBP11.07□□□□□ -0.64
SPTLC1-204ENST00000469778 TAB1Q15750 504 aa11.07□□□□□ -0.64
SPTLC1-204ENST00000469778 TBRG1Q3YBR2 411 aa11.07□□□□□ -0.64
SPTLC1-204ENST00000469778 SLC36A2Q495M3 483 aa11.07□□□□□ -0.64
SPTLC1-204ENST00000469778 ZNF362Q5T0B9 420 aaPredicted RBP11.07□□□□□ -0.64
SPTLC1-204ENST00000469778 FOXL2NBQ6ZUU3 175 aa11.07□□□□□ -0.64
SPTLC1-204ENST00000469778 ZBTB46Q86UZ6 589 aa11.07□□□□□ -0.64
SPTLC1-204ENST00000469778 LSRQ86X29 649 aaPredicted RBP11.07□□□□□ -0.64
SPTLC1-204ENST00000469778 GLB1L2Q8IW92 636 aa11.07□□□□□ -0.64
SPTLC1-204ENST00000469778 SLC22A24Q8N4F4 322 aa11.07□□□□□ -0.64
SPTLC1-204ENST00000469778 CBR4Q8N4T8 237 aa11.07□□□□□ -0.64
SPTLC1-204ENST00000469778 NPEPL1Q8NDH3 523 aa11.07□□□□□ -0.64
SPTLC1-204ENST00000469778 OR52E2Q8NGJ4 325 aa11.07□□□□□ -0.64
SPTLC1-204ENST00000469778 OR4K13Q8NH42 304 aa11.07□□□□□ -0.64
SPTLC1-204ENST00000469778 RASD2Q96D21 266 aa11.07□□□□□ -0.64
SPTLC1-204ENST00000469778 RADILQ96JH8 1075 aa11.07□□□□□ -0.64
SPTLC1-204ENST00000469778 DDOQ99489 341 aa11.07□□□□□ -0.64
SPTLC1-204ENST00000469778 CIB1Q99828 191 aa11.07□□□□□ -0.64
SPTLC1-204ENST00000469778 GABARAPL3Q9BY60 117 aa11.07□□□□□ -0.64
SPTLC1-204ENST00000469778 SYT4Q9H2B2 425 aa11.07□□□□□ -0.64
SPTLC1-204ENST00000469778 ESRP2Q9H6T0 727 aaKnown RBP11.07□□□□□ -0.64
SPTLC1-204ENST00000469778 CRIM1Q9NZV1 1036 aa11.07□□□□□ -0.64
SPTLC1-204ENST00000469778 TMEFF2Q9UIK5 374 aaPredicted RBP11.07□□□□□ -0.64
SPTLC1-204ENST00000469778 MOKQ9UQ07 419 aa11.07□□□□□ -0.64
SPTLC1-204ENST00000469778 SLC25A15Q9Y619 301 aa11.07□□□□□ -0.64
SPTLC1-204ENST00000469778 ICE1Q9Y2F5 2266 aa11.07□□□□□ -0.64
SPTLC1-204ENST00000469778 ANKHD1Q8IWZ3 2542 aaKnown RBP11.06□□□□□ -0.64
SPTLC1-204ENST00000469778 C12orf71A8MTZ7 269 aa11.06□□□□□ -0.64
SPTLC1-204ENST00000469778 CASQ2O14958 399 aaPredicted RBP11.06□□□□□ -0.64
SPTLC1-204ENST00000469778 SLC16A7O60669 478 aa11.06□□□□□ -0.64
SPTLC1-204ENST00000469778 UBL3O95164 117 aa11.06□□□□□ -0.64
SPTLC1-204ENST00000469778 HRGP04196 525 aa11.06□□□□□ -0.64
SPTLC1-204ENST00000469778 CBR1P16152 277 aa11.06□□□□□ -0.64
SPTLC1-204ENST00000469778 PTAFRP25105 342 aa11.06□□□□□ -0.64
SPTLC1-204ENST00000469778 LAP3P28838 519 aa11.06□□□□□ -0.64
SPTLC1-204ENST00000469778 SSTR2P30874 369 aa11.06□□□□□ -0.64
SPTLC1-204ENST00000469778 LSM6P62312 80 aaKnown RBP11.06□□□□□ -0.64
SPTLC1-204ENST00000469778 SLC34A1Q06495 639 aa11.06□□□□□ -0.64
SPTLC1-204ENST00000469778 KCNMB1Q16558 191 aa11.06□□□□□ -0.64
SPTLC1-204ENST00000469778 BEX5Q5H9J7 111 aa11.06□□□□□ -0.64
SPTLC1-204ENST00000469778 SLC35F1Q5T1Q4 408 aa11.06□□□□□ -0.64
SPTLC1-204ENST00000469778 LEG1Q6P5S2 330 aa11.06□□□□□ -0.64
SPTLC1-204ENST00000469778 WDFY1Q8IWB7 410 aa11.06□□□□□ -0.64
SPTLC1-204ENST00000469778 WDR31Q8NA23 367 aa11.06□□□□□ -0.64
SPTLC1-204ENST00000469778 OR4Q3Q8NH05 313 aa11.06□□□□□ -0.64
SPTLC1-204ENST00000469778 LINC01560Q8TB33 94 aa11.06□□□□□ -0.64
SPTLC1-204ENST00000469778 TRUB1Q8WWH5 349 aaKnown RBP11.06□□□□□ -0.64
SPTLC1-204ENST00000469778 ZNF837Q96EG3 531 aaPredicted RBP11.06□□□□□ -0.64
SPTLC1-204ENST00000469778 PLEKHA8Q96JA3 519 aa11.06□□□□□ -0.64
SPTLC1-204ENST00000469778 NMNAT3Q96T66 252 aa11.06□□□□□ -0.64
SPTLC1-204ENST00000469778 NUAK2Q9H093 628 aa11.06□□□□□ -0.64
SPTLC1-204ENST00000469778 RACGAP1Q9H0H5 632 aa11.06□□□□□ -0.64
SPTLC1-204ENST00000469778 VCXQ9H320 206 aa11.06□□□□□ -0.64
SPTLC1-204ENST00000469778 NELFAQ9H3P2 528 aa11.06□□□□□ -0.64
SPTLC1-204ENST00000469778 FN3KQ9H479 309 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms