RNA–Protein interactions for RNA: ENST00000469080.5

USP11-206, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 1 (best)

Gene USP11, Length 3,467 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-206ENST00000469080 IZUMO1Q8IYV9 350 aa11.26□□□□□ -0.61
USP11-206ENST00000469080 ELOA3Q8NG57 546 aa11.26□□□□□ -0.61
USP11-206ENST00000469080 BAHD1Q8TBE0 780 aaPredicted RBP11.26□□□□□ -0.61
USP11-206ENST00000469080 GNPDA2Q8TDQ7 276 aa11.26□□□□□ -0.61
USP11-206ENST00000469080 CPNE2Q96FN4 548 aaPredicted RBP11.26□□□□□ -0.61
USP11-206ENST00000469080 EDEM2Q9BV94 578 aa11.26□□□□□ -0.61
USP11-206ENST00000469080 HCAR1Q9BXC0 346 aa11.26□□□□□ -0.61
USP11-206ENST00000469080 TMPRSS5Q9H3S3 457 aa11.26□□□□□ -0.61
USP11-206ENST00000469080 GNG8Q9UK08 70 aa11.26□□□□□ -0.61
USP11-206ENST00000469080 GSTK1Q9Y2Q3 226 aa11.26□□□□□ -0.61
USP11-206ENST00000469080 SLC34A2O95436 690 aa11.25□□□□□ -0.61
USP11-206ENST00000469080 EPPINO95925 133 aa11.25□□□□□ -0.61
USP11-206ENST00000469080 IL1AP01583 271 aa11.25□□□□□ -0.61
USP11-206ENST00000469080 SCG5P05408 212 aa11.25□□□□□ -0.61
USP11-206ENST00000469080 FBXO45P0C2W1 286 aa11.25□□□□□ -0.61
USP11-206ENST00000469080 SULT1A3P0DMM9 295 aa11.25□□□□□ -0.61
USP11-206ENST00000469080 SULT1A4P0DMN0 295 aa11.25□□□□□ -0.61
USP11-206ENST00000469080 MAKP20794 623 aa11.25□□□□□ -0.61
USP11-206ENST00000469080 NPBWR1P48145 328 aa11.25□□□□□ -0.61
USP11-206ENST00000469080 NDUFA9Q16795 377 aa11.25□□□□□ -0.61
USP11-206ENST00000469080 SLC36A4Q6YBV0 504 aa11.25□□□□□ -0.61
USP11-206ENST00000469080 THSD4Q6ZMP0 1018 aa11.25□□□□□ -0.61
USP11-206ENST00000469080 ZNF671Q8TAW3 534 aa11.25□□□□□ -0.61
USP11-206ENST00000469080 C14orf79Q96F83 325 aa11.25□□□□□ -0.61
USP11-206ENST00000469080 TREM1Q9NP99 234 aa11.25□□□□□ -0.61
USP11-206ENST00000469080 UNC119BA6NIH7 251 aa11.25□□□□□ -0.61
USP11-206ENST00000469080 MCRIP1C9JLW8 97 aa11.25□□□□□ -0.61
USP11-206ENST00000469080 G3V3Y1 287 aa11.25□□□□□ -0.61
USP11-206ENST00000469080 S100A2P29034 98 aa11.25□□□□□ -0.61
USP11-206ENST00000469080 RIPPLY1Q0D2K3 151 aa11.25□□□□□ -0.61
USP11-206ENST00000469080 ILKQ13418 452 aa11.25□□□□□ -0.61
USP11-206ENST00000469080 RPL13AP3Q6NVV1 102 aa11.25□□□□□ -0.61
USP11-206ENST00000469080 MEIOBQ8N635 442 aa11.25□□□□□ -0.61
USP11-206ENST00000469080 CLDN22Q8N7P3 220 aa11.25□□□□□ -0.61
USP11-206ENST00000469080 C8orf44Q96CB5 159 aa11.25□□□□□ -0.61
USP11-206ENST00000469080 PLCXD1Q9NUJ7 323 aa11.25□□□□□ -0.61
USP11-206ENST00000469080 FTSJ1Q9UET6 329 aa11.25□□□□□ -0.61
USP11-206ENST00000469080 ALPK3Q96L96 1907 aa11.25□□□□□ -0.61
USP11-206ENST00000469080 A0A1B0GWA3 101 aa11.25□□□□□ -0.61
USP11-206ENST00000469080 A0A1W2PPC4 97 aa11.25□□□□□ -0.61
USP11-206ENST00000469080 MARCH11A6NNE9 402 aa11.25□□□□□ -0.61
USP11-206ENST00000469080 GPR89AB7ZAQ6 455 aa11.25□□□□□ -0.61
USP11-206ENST00000469080 GDF9O60383 454 aa11.25□□□□□ -0.61
USP11-206ENST00000469080 GPR89BP0CG08 455 aa11.25□□□□□ -0.61
USP11-206ENST00000469080 CCR9P51686 369 aa11.25□□□□□ -0.61
USP11-206ENST00000469080 HNRNPKP61978 463 aaKnown RBP eCLIP11.25□□□□□ -0.61
USP11-206ENST00000469080 OR8G1Q15617 311 aa11.25□□□□□ -0.61
USP11-206ENST00000469080 POMGNT2Q8NAT1 580 aa11.25□□□□□ -0.61
USP11-206ENST00000469080 OR5M9Q8NGP3 310 aa11.25□□□□□ -0.61
USP11-206ENST00000469080 ZPBPQ9BS86 351 aa11.25□□□□□ -0.61
USP11-206ENST00000469080 KATNB1Q9BVA0 655 aa11.25□□□□□ -0.61
USP11-206ENST00000469080 SIDT1Q9NXL6 827 aaKnown RBP11.25□□□□□ -0.61
USP11-206ENST00000469080 NTMQ9P121 344 aa11.25□□□□□ -0.61
USP11-206ENST00000469080 MMACHCQ9Y4U1 282 aa11.25□□□□□ -0.61
USP11-206ENST00000469080 NUBP2Q9Y5Y2 271 aa11.25□□□□□ -0.61
USP11-206ENST00000469080 ZNF705EA8MWA4 302 aaPredicted RBP11.24□□□□□ -0.61
USP11-206ENST00000469080 EIF1AYO14602 144 aaKnown RBP11.24□□□□□ -0.61
USP11-206ENST00000469080 GALR3O60755 368 aaPredicted RBP11.24□□□□□ -0.61
USP11-206ENST00000469080 FZD7O75084 574 aa11.24□□□□□ -0.61
USP11-206ENST00000469080 FARS2O95363 451 aaKnown RBP11.24□□□□□ -0.61
USP11-206ENST00000469080 GPANK1O95872 356 aa11.24□□□□□ -0.61
USP11-206ENST00000469080 HPP00738 406 aa11.24□□□□□ -0.61
USP11-206ENST00000469080 WNT1P04628 370 aa11.24□□□□□ -0.61
USP11-206ENST00000469080 GABRA1P14867 456 aa11.24□□□□□ -0.61
USP11-206ENST00000469080 PPP3CBP16298 524 aa11.24□□□□□ -0.61
USP11-206ENST00000469080 IL12BP29460 328 aa11.24□□□□□ -0.61
USP11-206ENST00000469080 DDTP30046 118 aa11.24□□□□□ -0.61
USP11-206ENST00000469080 EVX1P49640 407 aa11.24□□□□□ -0.61
USP11-206ENST00000469080 OCLNQ16625 522 aa11.24□□□□□ -0.61
USP11-206ENST00000469080 GDPGP1Q6ZNW5 385 aa11.24□□□□□ -0.61
USP11-206ENST00000469080 GKN2Q86XP6 184 aa11.24□□□□□ -0.61
USP11-206ENST00000469080 CA13Q8N1Q1 262 aa11.24□□□□□ -0.61
USP11-206ENST00000469080 ZNF619Q8N2I2 560 aa11.24□□□□□ -0.61
USP11-206ENST00000469080 TMEM99Q8N816 258 aa11.24□□□□□ -0.61
USP11-206ENST00000469080 CCDC54Q8NEL0 328 aa11.24□□□□□ -0.61
USP11-206ENST00000469080 NEIL3Q8TAT5 605 aa11.24□□□□□ -0.61
USP11-206ENST00000469080 TM9SF4Q92544 642 aa11.24□□□□□ -0.61
USP11-206ENST00000469080 RASD2Q96D21 266 aa11.24□□□□□ -0.61
USP11-206ENST00000469080 NUDT22Q9BRQ3 303 aa11.24□□□□□ -0.61
USP11-206ENST00000469080 NDC1Q9BTX1 674 aa11.24□□□□□ -0.61
USP11-206ENST00000469080 GABARAPL3Q9BY60 117 aa11.24□□□□□ -0.61
USP11-206ENST00000469080 METTL9Q9H1A3 318 aa11.24□□□□□ -0.61
USP11-206ENST00000469080 KRCC1Q9NPI7 259 aaPredicted RBP11.24□□□□□ -0.61
USP11-206ENST00000469080 ACACAQ13085 2346 aa11.24□□□□□ -0.61
USP11-206ENST00000469080 PCNX1Q96RV3 2341 aa11.24□□□□□ -0.61
USP11-206ENST00000469080 TRAPPC13A5PLN9 417 aa11.24□□□□□ -0.61
USP11-206ENST00000469080 H3BML4 177 aa11.24□□□□□ -0.61
USP11-206ENST00000469080 SMAD9O15198 467 aaKnown RBP11.24□□□□□ -0.61
USP11-206ENST00000469080 ZP1P60852 638 aa11.24□□□□□ -0.61
USP11-206ENST00000469080 RAC1P63000 192 aa11.24□□□□□ -0.61
USP11-206ENST00000469080 ZNF687Q8N1G0 1237 aa11.24□□□□□ -0.61
USP11-206ENST00000469080 EIF4E3Q8N5X7 224 aaKnown RBP11.24□□□□□ -0.61
USP11-206ENST00000469080 CDRT4Q8N9R6 151 aa11.24□□□□□ -0.61
USP11-206ENST00000469080 C16orf52Q8NHV5 167 aa11.24□□□□□ -0.61
USP11-206ENST00000469080 ZNF775Q96BV0 537 aaPredicted RBP11.24□□□□□ -0.61
USP11-206ENST00000469080 MARS2Q96GW9 593 aaKnown RBP11.24□□□□□ -0.61
USP11-206ENST00000469080 NMNAT3Q96T66 252 aa11.24□□□□□ -0.61
USP11-206ENST00000469080 TBL1XR1Q9BZK7 514 aa11.24□□□□□ -0.61
USP11-206ENST00000469080 UBQLN3Q9H347 655 aa11.24□□□□□ -0.61
USP11-206ENST00000469080 FLRT3Q9NZU0 649 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms