RNA–Protein interactions for RNA: ENST00000468653.5

SMC4-209, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,756 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-209ENST00000468653 TMED9Q9BVK6 235 aa16.92■□□□□ 0.3
SMC4-209ENST00000468653 MRPL13Q9BYD1 178 aaKnown RBP16.92■□□□□ 0.3
SMC4-209ENST00000468653 SLC6A15Q9H2J7 730 aa16.92■□□□□ 0.3
SMC4-209ENST00000468653 TIGARQ9NQ88 270 aa16.92■□□□□ 0.3
SMC4-209ENST00000468653 QPCTLQ9NXS2 382 aa16.92■□□□□ 0.3
SMC4-209ENST00000468653 ACOT7O00154 380 aa16.91■□□□□ 0.3
SMC4-209ENST00000468653 ZNF593O00488 134 aaPredicted RBP16.91■□□□□ 0.3
SMC4-209ENST00000468653 LRRTM2O43300 516 aa16.91■□□□□ 0.3
SMC4-209ENST00000468653 ADAM8P78325 824 aa16.91■□□□□ 0.3
SMC4-209ENST00000468653 POU4F3Q15319 338 aa16.91■□□□□ 0.3
SMC4-209ENST00000468653 THEM4Q5T1C6 240 aa16.91■□□□□ 0.3
SMC4-209ENST00000468653 ARL9Q6T311 187 aa16.91■□□□□ 0.3
SMC4-209ENST00000468653 IGFL2Q6UWQ7 119 aa16.91■□□□□ 0.3
SMC4-209ENST00000468653 PLEKHG7Q6ZR37 379 aa16.91■□□□□ 0.3
SMC4-209ENST00000468653 ASB18Q6ZVZ8 466 aa16.91■□□□□ 0.3
SMC4-209ENST00000468653 CREB3L2Q70SY1 520 aa16.91■□□□□ 0.3
SMC4-209ENST00000468653 OR9K2Q8NGE7 335 aa16.91■□□□□ 0.3
SMC4-209ENST00000468653 THEM6Q8WUY1 208 aa16.91■□□□□ 0.3
SMC4-209ENST00000468653 NSMAFQ92636 917 aa16.91■□□□□ 0.3
SMC4-209ENST00000468653 ADGRG7Q96K78 797 aa16.91■□□□□ 0.3
SMC4-209ENST00000468653 MRPL22Q9NWU5 206 aaKnown RBP16.91■□□□□ 0.3
SMC4-209ENST00000468653 KLHDC2Q9Y2U9 406 aa16.91■□□□□ 0.3
SMC4-209ENST00000468653 SIRT4Q9Y6E7 314 aaPredicted RBP16.91■□□□□ 0.3
SMC4-209ENST00000468653 PHYHO14832 338 aa16.9■□□□□ 0.3
SMC4-209ENST00000468653 SMAD9O15198 467 aaKnown RBP16.9■□□□□ 0.3
SMC4-209ENST00000468653 PGA4P0DJD7 388 aa16.9■□□□□ 0.3
SMC4-209ENST00000468653 PGA3P0DJD8 388 aa16.9■□□□□ 0.3
SMC4-209ENST00000468653 RPS27P42677 84 aaKnown RBP16.9■□□□□ 0.3
SMC4-209ENST00000468653 SLC17A1Q14916 467 aa16.9■□□□□ 0.3
SMC4-209ENST00000468653 FAM109AQ8N4B1 249 aa16.9■□□□□ 0.3
SMC4-209ENST00000468653 PELI1Q96FA3 418 aa16.9■□□□□ 0.3
SMC4-209ENST00000468653 TRMT61AQ96FX7 289 aaKnown RBP16.9■□□□□ 0.3
SMC4-209ENST00000468653 CCDC86Q9H6F5 360 aaKnown RBP16.9■□□□□ 0.3
SMC4-209ENST00000468653 TXNL4BQ9NX01 149 aaKnown RBP16.9■□□□□ 0.3
SMC4-209ENST00000468653 CSAG2Q9Y5P2 127 aa16.9■□□□□ 0.3
SMC4-209ENST00000468653 IGKV1D-43A0A0B4J1Z2 117 aa16.89■□□□□ 0.3
SMC4-209ENST00000468653 PSMD9O00233 223 aa16.89■□□□□ 0.3
SMC4-209ENST00000468653 CLPXO76031 633 aa16.89■□□□□ 0.3
SMC4-209ENST00000468653 HLA-DPB1P04440 258 aa16.89■□□□□ 0.3
SMC4-209ENST00000468653 SPARCP09486 303 aa16.89■□□□□ 0.3
SMC4-209ENST00000468653 TACSTD2P09758 323 aa16.89■□□□□ 0.3
SMC4-209ENST00000468653 ALOX5APP20292 161 aa16.89■□□□□ 0.3
SMC4-209ENST00000468653 CLDN15P56746 228 aa16.89■□□□□ 0.3
SMC4-209ENST00000468653 FABP5Q01469 135 aa16.89■□□□□ 0.3
SMC4-209ENST00000468653 SLC10A1Q14973 349 aa16.89■□□□□ 0.3
SMC4-209ENST00000468653 OTPQ5XKR4 325 aa16.89■□□□□ 0.3
SMC4-209ENST00000468653 RPTNQ6XPR3 784 aa16.89■□□□□ 0.3
SMC4-209ENST00000468653 FAM220AQ7Z4H9 259 aa16.89■□□□□ 0.3
SMC4-209ENST00000468653 KCTD20Q7Z5Y7 419 aa16.89■□□□□ 0.3
SMC4-209ENST00000468653 OTOSQ8NHW6 89 aa16.89■□□□□ 0.3
SMC4-209ENST00000468653 FNDC8Q8TC99 324 aa16.89■□□□□ 0.3
SMC4-209ENST00000468653 SF3B5Q9BWJ5 86 aaKnown RBP16.89■□□□□ 0.3
SMC4-209ENST00000468653 MFRPQ9BY79 579 aa16.89■□□□□ 0.3
SMC4-209ENST00000468653 ACOXLQ9NUZ1 547 aa16.89■□□□□ 0.3
SMC4-209ENST00000468653 GSTK1Q9Y2Q3 226 aa16.89■□□□□ 0.3
SMC4-209ENST00000468653 GRIP1Q9Y3R0 1128 aa16.89■□□□□ 0.3
SMC4-209ENST00000468653 PLPP2O43688 288 aa16.89■□□□□ 0.29
SMC4-209ENST00000468653 CEACAM4O75871 244 aa16.89■□□□□ 0.29
SMC4-209ENST00000468653 MPZL1O95297 269 aa16.89■□□□□ 0.29
SMC4-209ENST00000468653 KRT8P05787 483 aa16.89■□□□□ 0.29
SMC4-209ENST00000468653 ZNF823P16415 610 aa16.89■□□□□ 0.29
SMC4-209ENST00000468653 PTGS2P35354 604 aa16.89■□□□□ 0.29
SMC4-209ENST00000468653 ENTPD1P49961 510 aa16.89■□□□□ 0.29
SMC4-209ENST00000468653 LHX2P50458 406 aa16.89■□□□□ 0.29
SMC4-209ENST00000468653 SIRPAP78324 504 aa16.89■□□□□ 0.29
SMC4-209ENST00000468653 SRYQ05066 204 aa16.89■□□□□ 0.29
SMC4-209ENST00000468653 SLC3A1Q07837 685 aa16.89■□□□□ 0.29
SMC4-209ENST00000468653 MEP1BQ16820 701 aa16.89■□□□□ 0.29
SMC4-209ENST00000468653 C22orf42Q6IC83 251 aa16.89■□□□□ 0.29
SMC4-209ENST00000468653 SLC18B1Q6NT16 456 aa16.89■□□□□ 0.29
SMC4-209ENST00000468653 SLC26A10Q8NG04 563 aa16.89■□□□□ 0.29
SMC4-209ENST00000468653 SNIP1Q8TAD8 396 aaKnown RBP16.89■□□□□ 0.29
SMC4-209ENST00000468653 ROBO4Q8WZ75 1007 aa16.89■□□□□ 0.29
SMC4-209ENST00000468653 CPNE4Q96A23 557 aaPredicted RBP16.89■□□□□ 0.29
SMC4-209ENST00000468653 COQ7Q99807 217 aa16.89■□□□□ 0.29
SMC4-209ENST00000468653 KLHL9Q9P2J3 617 aa16.89■□□□□ 0.29
SMC4-209ENST00000468653 KCNG2Q9UJ96 466 aa16.89■□□□□ 0.29
SMC4-209ENST00000468653 ING1Q9UK53 422 aaPredicted RBP16.89■□□□□ 0.29
SMC4-209ENST00000468653 IKZF2Q9UKS7 526 aa16.89■□□□□ 0.29
SMC4-209ENST00000468653 TRDV1A0A1B0GX56 115 aa16.88■□□□□ 0.29
SMC4-209ENST00000468653 METTL15A6NJ78 407 aa16.88■□□□□ 0.29
SMC4-209ENST00000468653 PRR32B1ATL7 298 aa16.88■□□□□ 0.29
SMC4-209ENST00000468653 CD53P19397 219 aa16.88■□□□□ 0.29
SMC4-209ENST00000468653 ZNF684Q5T5D7 378 aa16.88■□□□□ 0.29
SMC4-209ENST00000468653 CD200R1LQ6Q8B3 271 aa16.88■□□□□ 0.29
SMC4-209ENST00000468653 TRILQ7L0X0 811 aa16.88■□□□□ 0.29
SMC4-209ENST00000468653 GLB1L2Q8IW92 636 aa16.88■□□□□ 0.29
SMC4-209ENST00000468653 MEIOBQ8N635 442 aa16.88■□□□□ 0.29
SMC4-209ENST00000468653 YIPF7Q8N8F6 280 aa16.88■□□□□ 0.29
SMC4-209ENST00000468653 ABTB1Q969K4 478 aaPredicted RBP16.88■□□□□ 0.29
SMC4-209ENST00000468653 HDHD5Q9BXW7 423 aa16.88■□□□□ 0.29
SMC4-209ENST00000468653 LDAHQ9H6V9 325 aa16.88■□□□□ 0.29
SMC4-209ENST00000468653 ACKR4Q9NPB9 350 aa16.88■□□□□ 0.29
SMC4-209ENST00000468653 ST6GALNAC2Q9UJ37 374 aa16.88■□□□□ 0.29
SMC4-209ENST00000468653 TRAV17A0A0B4J275 112 aa16.87■□□□□ 0.29
SMC4-209ENST00000468653 OR8G3PP0DMU2 310 aa16.87■□□□□ 0.29
SMC4-209ENST00000468653 NR2C1P13056 603 aa16.87■□□□□ 0.29
SMC4-209ENST00000468653 EDNRAP25101 427 aa16.87■□□□□ 0.29
SMC4-209ENST00000468653 PSMB10P40306 273 aa16.87■□□□□ 0.29
SMC4-209ENST00000468653 EGR3Q06889 387 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms