RNA–Protein interactions for RNA: ENST00000468545.1

TMEM39A-204, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 575 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-204ENST00000468545 AASSQ9UDR5 926 aa3.64□□□□□ -1.83
TMEM39A-204ENST00000468545 SEC14L4Q9UDX3 406 aa3.64□□□□□ -1.83
TMEM39A-204ENST00000468545 CAMK2AQ9UQM7 478 aa3.64□□□□□ -1.83
TMEM39A-204ENST00000468545 B3GNT3Q9Y2A9 372 aa3.64□□□□□ -1.83
TMEM39A-204ENST00000468545 TMEM5Q9Y2B1 443 aa3.64□□□□□ -1.83
TMEM39A-204ENST00000468545 POFUT2Q9Y2G5 429 aa3.64□□□□□ -1.83
TMEM39A-204ENST00000468545 GMPPBQ9Y5P6 360 aa3.64□□□□□ -1.83
TMEM39A-204ENST00000468545 LIPGQ9Y5X9 500 aa3.64□□□□□ -1.83
TMEM39A-204ENST00000468545 PCNX3Q9H6A9 2034 aa3.64□□□□□ -1.83
TMEM39A-204ENST00000468545 DMXL1Q9Y485 3027 aa3.63□□□□□ -1.83
TMEM39A-204ENST00000468545 AKAP13Q12802 2813 aa3.63□□□□□ -1.83
TMEM39A-204ENST00000468545 HEATR5AQ86XA9 2040 aa3.63□□□□□ -1.83
TMEM39A-204ENST00000468545 A0A0J9YW62 118 aa3.63□□□□□ -1.83
TMEM39A-204ENST00000468545 A0A1B0GTH9 108 aa3.63□□□□□ -1.83
TMEM39A-204ENST00000468545 LIPT2A6NK58 231 aa3.63□□□□□ -1.83
TMEM39A-204ENST00000468545 GJE1A6NN92 205 aa3.63□□□□□ -1.83
TMEM39A-204ENST00000468545 M0R129 80 aa3.63□□□□□ -1.83
TMEM39A-204ENST00000468545 PSMD9O00233 223 aa3.63□□□□□ -1.83
TMEM39A-204ENST00000468545 DLGAP1O14490 977 aa3.63□□□□□ -1.83
TMEM39A-204ENST00000468545 BCKDKO14874 412 aa3.63□□□□□ -1.83
TMEM39A-204ENST00000468545 MGST3O14880 152 aa3.63□□□□□ -1.83
TMEM39A-204ENST00000468545 ZNF208O43345 1280 aa3.63□□□□□ -1.83
TMEM39A-204ENST00000468545 OR2T1O43869 369 aa3.63□□□□□ -1.83
TMEM39A-204ENST00000468545 HCN1O60741 890 aa3.63□□□□□ -1.83
TMEM39A-204ENST00000468545 PTP4A3O75365 173 aa3.63□□□□□ -1.83
TMEM39A-204ENST00000468545 GLSO94925 669 aaPredicted RBP3.63□□□□□ -1.83
TMEM39A-204ENST00000468545 NDUFB2O95178 105 aa3.63□□□□□ -1.83
TMEM39A-204ENST00000468545 RCBTB2O95199 551 aa3.63□□□□□ -1.83
TMEM39A-204ENST00000468545 SYNGR4O95473 234 aa3.63□□□□□ -1.83
TMEM39A-204ENST00000468545 SLC2A10O95528 541 aa3.63□□□□□ -1.83
TMEM39A-204ENST00000468545 PPP1R3DO95685 299 aa3.63□□□□□ -1.83
TMEM39A-204ENST00000468545 ADORA3P0DMS8 318 aa3.63□□□□□ -1.83
TMEM39A-204ENST00000468545 NDUFB7P17568 137 aa3.63□□□□□ -1.83
TMEM39A-204ENST00000468545 EGR1P18146 543 aa3.63□□□□□ -1.83
TMEM39A-204ENST00000468545 KLK2P20151 261 aa3.63□□□□□ -1.83
TMEM39A-204ENST00000468545 CHMP24386 653 aa3.63□□□□□ -1.83
TMEM39A-204ENST00000468545 FPR3P25089 353 aa3.63□□□□□ -1.83
TMEM39A-204ENST00000468545 EPHA2P29317 976 aa3.63□□□□□ -1.83
TMEM39A-204ENST00000468545 SLC6A6P31641 620 aa3.63□□□□□ -1.83
TMEM39A-204ENST00000468545 CAPGP40121 348 aa3.63□□□□□ -1.83
TMEM39A-204ENST00000468545 SLC9A3P48764 834 aa3.63□□□□□ -1.83
TMEM39A-204ENST00000468545 CENPAP49450 140 aa3.63□□□□□ -1.83
TMEM39A-204ENST00000468545 DIO1P49895 249 aa3.63□□□□□ -1.83
TMEM39A-204ENST00000468545 CTBP2P56545 445 aa3.63□□□□□ -1.83
TMEM39A-204ENST00000468545 CLDN15P56746 228 aa3.63□□□□□ -1.83
TMEM39A-204ENST00000468545 TIRAPP58753 221 aa3.63□□□□□ -1.83
TMEM39A-204ENST00000468545 RPS3AP61247 264 aaKnown RBP3.63□□□□□ -1.83
TMEM39A-204ENST00000468545 SLC35A1P78382 337 aa3.63□□□□□ -1.83
TMEM39A-204ENST00000468545 ADARB1P78563 741 aaKnown RBP3.63□□□□□ -1.83
TMEM39A-204ENST00000468545 MYBPC1Q00872 1141 aa3.63□□□□□ -1.83
TMEM39A-204ENST00000468545 IL5RAQ01344 420 aa3.63□□□□□ -1.83
TMEM39A-204ENST00000468545 COL10A1Q03692 680 aa3.63□□□□□ -1.83
TMEM39A-204ENST00000468545 COX10Q12887 443 aa3.63□□□□□ -1.83
TMEM39A-204ENST00000468545 MYBPHQ13203 477 aa3.63□□□□□ -1.83
TMEM39A-204ENST00000468545 SELENBP1Q13228 472 aa3.63□□□□□ -1.83
TMEM39A-204ENST00000468545 C1DQ13901 141 aaKnown RBP3.63□□□□□ -1.83
TMEM39A-204ENST00000468545 PTGES3Q15185 160 aaKnown RBP3.63□□□□□ -1.83
TMEM39A-204ENST00000468545 SNAPC1Q16533 368 aa3.63□□□□□ -1.83
TMEM39A-204ENST00000468545 RFX4Q33E94 735 aa3.63□□□□□ -1.83
TMEM39A-204ENST00000468545 SYT14P1Q58G82 188 aa3.63□□□□□ -1.83
TMEM39A-204ENST00000468545 ALG10Q5BKT4 473 aa3.63□□□□□ -1.83
TMEM39A-204ENST00000468545 CMPK2Q5EBM0 449 aa3.63□□□□□ -1.83
TMEM39A-204ENST00000468545 NHSL2Q5HYW2 709 aa3.63□□□□□ -1.83
TMEM39A-204ENST00000468545 PDSS1Q5T2R2 415 aa3.63□□□□□ -1.83
TMEM39A-204ENST00000468545 FAM69AQ5T7M9 428 aa3.63□□□□□ -1.83
TMEM39A-204ENST00000468545 TTC23Q5W5X9 447 aa3.63□□□□□ -1.83
TMEM39A-204ENST00000468545 TMEM225Q6GV28 225 aa3.63□□□□□ -1.83
TMEM39A-204ENST00000468545 ACSM5Q6NUN0 579 aa3.63□□□□□ -1.83
TMEM39A-204ENST00000468545 C3orf33Q6P1S2 294 aa3.63□□□□□ -1.83
TMEM39A-204ENST00000468545 SMARCD3Q6STE5 483 aa3.63□□□□□ -1.83
TMEM39A-204ENST00000468545 CASP12Q6UXS9 341 aa3.63□□□□□ -1.83
TMEM39A-204ENST00000468545 TMPPEQ6ZT21 453 aa3.63□□□□□ -1.83
TMEM39A-204ENST00000468545 RASSF6Q6ZTQ3 369 aa3.63□□□□□ -1.83
TMEM39A-204ENST00000468545 PTCHD4Q6ZW05 846 aa3.63□□□□□ -1.83
TMEM39A-204ENST00000468545 TMPRSS11FQ6ZWK6 438 aa3.63□□□□□ -1.83
TMEM39A-204ENST00000468545 H1FNTQ75WM6 255 aaPredicted RBP3.63□□□□□ -1.83
TMEM39A-204ENST00000468545 TRILQ7L0X0 811 aa3.63□□□□□ -1.83
TMEM39A-204ENST00000468545 SLC46A3Q7Z3Q1 461 aa3.63□□□□□ -1.83
TMEM39A-204ENST00000468545 NANOGNBQ7Z5D8 188 aa3.63□□□□□ -1.83
TMEM39A-204ENST00000468545 GPAT4Q86UL3 456 aa3.63□□□□□ -1.83
TMEM39A-204ENST00000468545 ZFP62Q8NB50 900 aaPredicted RBP3.63□□□□□ -1.83
TMEM39A-204ENST00000468545 OR52L1Q8NGH7 329 aa3.63□□□□□ -1.83
TMEM39A-204ENST00000468545 OR5M9Q8NGP3 310 aa3.63□□□□□ -1.83
TMEM39A-204ENST00000468545 OR5J2Q8NH18 312 aa3.63□□□□□ -1.83
TMEM39A-204ENST00000468545 OR4K13Q8NH42 304 aa3.63□□□□□ -1.83
TMEM39A-204ENST00000468545 OR2V1Q8NHB1 315 aa3.63□□□□□ -1.83
TMEM39A-204ENST00000468545 MFSD8Q8NHS3 518 aa3.63□□□□□ -1.83
TMEM39A-204ENST00000468545 MBD3L2Q8NHZ7 208 aaPredicted RBP3.63□□□□□ -1.83
TMEM39A-204ENST00000468545 NEIL3Q8TAT5 605 aa3.63□□□□□ -1.83
TMEM39A-204ENST00000468545 FANK1Q8TC84 345 aa3.63□□□□□ -1.83
TMEM39A-204ENST00000468545 ZNF845Q96IR2 970 aaPredicted RBP3.63□□□□□ -1.83
TMEM39A-204ENST00000468545 PLEKHA8Q96JA3 519 aa3.63□□□□□ -1.83
TMEM39A-204ENST00000468545 KLHL15Q96M94 604 aa3.63□□□□□ -1.83
TMEM39A-204ENST00000468545 MUS81Q96NY9 551 aa3.63□□□□□ -1.83
TMEM39A-204ENST00000468545 ERMAPQ96PL5 475 aaPredicted RBP3.63□□□□□ -1.83
TMEM39A-204ENST00000468545 TAAR6Q96RI8 345 aa3.63□□□□□ -1.83
TMEM39A-204ENST00000468545 ZNF184Q99676 751 aaPredicted RBP3.63□□□□□ -1.83
TMEM39A-204ENST00000468545 NAA11Q9BSU3 229 aaPredicted RBP3.63□□□□□ -1.83
TMEM39A-204ENST00000468545 TMEM43Q9BTV4 400 aa3.63□□□□□ -1.83
TMEM39A-204ENST00000468545 POTEKPQ9BYX7 375 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms