RNA–Protein interactions for RNA: ENST00000466781.5

HPS4-209, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 6,136 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-209ENST00000466781 ELAVL4P26378 380 aaKnown RBP8.02□□□□□ -1.13
HPS4-209ENST00000466781 KIAA1024LP59773 190 aa8.02□□□□□ -1.13
HPS4-209ENST00000466781 ACSM1Q08AH1 577 aa8.02□□□□□ -1.13
HPS4-209ENST00000466781 SELPLGQ14242 412 aa8.02□□□□□ -1.13
HPS4-209ENST00000466781 GLYR1Q49A26 553 aaPredicted RBP8.02□□□□□ -1.13
HPS4-209ENST00000466781 YIF1BQ5BJH7 314 aa8.02□□□□□ -1.13
HPS4-209ENST00000466781 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.02□□□□□ -1.13
HPS4-209ENST00000466781 MAML2Q8IZL2 1156 aaPredicted RBP8.02□□□□□ -1.13
HPS4-209ENST00000466781 SEMA6DQ8NFY4 1073 aa8.02□□□□□ -1.13
HPS4-209ENST00000466781 OR51A2Q8NGJ7 313 aa8.02□□□□□ -1.13
HPS4-209ENST00000466781 LINC01599Q8WXQ3 324 aa8.02□□□□□ -1.13
HPS4-209ENST00000466781 UTP4Q969X6 686 aaKnown RBP8.02□□□□□ -1.13
HPS4-209ENST00000466781 CPNE5Q9HCH3 593 aa8.02□□□□□ -1.13
HPS4-209ENST00000466781 LTB4R2Q9NPC1 389 aa8.02□□□□□ -1.13
HPS4-209ENST00000466781 QSER1Q2KHR3 1735 aa8.02□□□□□ -1.13
HPS4-209ENST00000466781 A0A0D9SG52 128 aa8.01□□□□□ -1.13
HPS4-209ENST00000466781 SEC14L6B5MCN3 397 aa8.01□□□□□ -1.13
HPS4-209ENST00000466781 RPA2P15927 270 aa8.01□□□□□ -1.13
HPS4-209ENST00000466781 ARR3P36575 388 aa8.01□□□□□ -1.13
HPS4-209ENST00000466781 UBE2G1P62253 170 aa8.01□□□□□ -1.13
HPS4-209ENST00000466781 C18orf63Q68DL7 685 aa8.01□□□□□ -1.13
HPS4-209ENST00000466781 TMEM64Q6YI46 380 aa8.01□□□□□ -1.13
HPS4-209ENST00000466781 RFLNAQ6ZTI6 216 aa8.01□□□□□ -1.13
HPS4-209ENST00000466781 RFPL4BQ6ZWI9 263 aa8.01□□□□□ -1.13
HPS4-209ENST00000466781 KDF1Q8NAX2 398 aaPredicted RBP8.01□□□□□ -1.13
HPS4-209ENST00000466781 BTF3L4Q96K17 158 aa8.01□□□□□ -1.13
HPS4-209ENST00000466781 TNFRSF13CQ96RJ3 184 aa8.01□□□□□ -1.13
HPS4-209ENST00000466781 PLEKHF2Q9H8W4 249 aa8.01□□□□□ -1.13
HPS4-209ENST00000466781 NDRG4Q9ULP0 352 aaKnown RBP8.01□□□□□ -1.13
HPS4-209ENST00000466781 A0A0B4J2A0 478 aa8.01□□□□□ -1.13
HPS4-209ENST00000466781 OR6C76A6NM76 312 aa8.01□□□□□ -1.13
HPS4-209ENST00000466781 CTRB1P17538 263 aa8.01□□□□□ -1.13
HPS4-209ENST00000466781 SEMA3BQ13214 749 aa8.01□□□□□ -1.13
HPS4-209ENST00000466781 EBPQ15125 230 aaKnown RBP8.01□□□□□ -1.13
HPS4-209ENST00000466781 CTRB2Q6GPI1 263 aa8.01□□□□□ -1.13
HPS4-209ENST00000466781 Q6ZRG5 221 aa8.01□□□□□ -1.13
HPS4-209ENST00000466781 C1orf87Q8N0U7 546 aa8.01□□□□□ -1.13
HPS4-209ENST00000466781 EXD3Q8N9H8 876 aa8.01□□□□□ -1.13
HPS4-209ENST00000466781 SLC25A43Q8WUT9 341 aaPredicted RBP8.01□□□□□ -1.13
HPS4-209ENST00000466781 C3orf49Q96BT1 292 aa8.01□□□□□ -1.13
HPS4-209ENST00000466781 FGGYQ96C11 551 aa8.01□□□□□ -1.13
HPS4-209ENST00000466781 CFHR5Q9BXR6 569 aa8.01□□□□□ -1.13
HPS4-209ENST00000466781 ZDHHC5Q9C0B5 715 aa8.01□□□□□ -1.13
HPS4-209ENST00000466781 SHPKQ9UHJ6 478 aa8.01□□□□□ -1.13
HPS4-209ENST00000466781 CTNSO60931 367 aa8.01□□□□□ -1.13
HPS4-209ENST00000466781 IGHV3-9P01782 118 aa8.01□□□□□ -1.13
HPS4-209ENST00000466781 NUDT7P0C024 238 aa8.01□□□□□ -1.13
HPS4-209ENST00000466781 FKBP2P26885 142 aaKnown RBP8.01□□□□□ -1.13
HPS4-209ENST00000466781 APOBEC1P41238 236 aaKnown RBP8.01□□□□□ -1.13
HPS4-209ENST00000466781 POU4F3Q15319 338 aa8.01□□□□□ -1.13
HPS4-209ENST00000466781 DESI1Q6ICB0 168 aa8.01□□□□□ -1.13
HPS4-209ENST00000466781 UBAC2Q8NBM4 344 aa8.01□□□□□ -1.13
HPS4-209ENST00000466781 BPIFCQ8NFQ6 507 aa8.01□□□□□ -1.13
HPS4-209ENST00000466781 ABHD11Q8NFV4 315 aa8.01□□□□□ -1.13
HPS4-209ENST00000466781 C1QTNF6Q9BXI9 259 aa8.01□□□□□ -1.13
HPS4-209ENST00000466781 OR52A1Q9UKL2 312 aa8.01□□□□□ -1.13
HPS4-209ENST00000466781 OSGIN2Q9Y236 505 aa8.01□□□□□ -1.13
HPS4-209ENST00000466781 ACOD1A6NK06 481 aa8.01□□□□□ -1.13
HPS4-209ENST00000466781 FIGNL2A6NMB9 653 aa8.01□□□□□ -1.13
HPS4-209ENST00000466781 MKRN2OSH3BPM6 223 aa8.01□□□□□ -1.13
HPS4-209ENST00000466781 TNFSF15O95150 251 aa8.01□□□□□ -1.13
HPS4-209ENST00000466781 ZNF93P35789 620 aaPredicted RBP8.01□□□□□ -1.13
HPS4-209ENST00000466781 ALKBH1Q13686 389 aaKnown RBP8.01□□□□□ -1.13
HPS4-209ENST00000466781 TRNP1Q6NT89 227 aa8.01□□□□□ -1.13
HPS4-209ENST00000466781 LYPD4Q6UWN0 246 aa8.01□□□□□ -1.13
HPS4-209ENST00000466781 Q7L0L9 218 aa8.01□□□□□ -1.13
HPS4-209ENST00000466781 YRDCQ86U90 279 aaKnown RBP8.01□□□□□ -1.13
HPS4-209ENST00000466781 NKAIN3Q8N8D7 197 aa8.01□□□□□ -1.13
HPS4-209ENST00000466781 BHLHE23Q8NDY6 225 aa8.01□□□□□ -1.13
HPS4-209ENST00000466781 ZFAND2BQ8WV99 257 aa8.01□□□□□ -1.13
HPS4-209ENST00000466781 SARAFQ96BY9 339 aa8.01□□□□□ -1.13
HPS4-209ENST00000466781 PDLIM5Q96HC4 596 aaKnown RBP8.01□□□□□ -1.13
HPS4-209ENST00000466781 NDFIP1Q9BT67 221 aa8.01□□□□□ -1.13
HPS4-209ENST00000466781 PRDM4Q9UKN5 801 aa8.01□□□□□ -1.13
HPS4-209ENST00000466781 GPR45Q9Y5Y3 372 aa8.01□□□□□ -1.13
HPS4-209ENST00000466781 SH2D1BO14796 132 aa8.01□□□□□ -1.13
HPS4-209ENST00000466781 OIP5O43482 229 aa8.01□□□□□ -1.13
HPS4-209ENST00000466781 NSA2O95478 260 aaKnown RBP8.01□□□□□ -1.13
HPS4-209ENST00000466781 MT-ATP6P00846 226 aa8.01□□□□□ -1.13
HPS4-209ENST00000466781 IMPA1P29218 277 aa8.01□□□□□ -1.13
HPS4-209ENST00000466781 GABRA5P31644 462 aa8.01□□□□□ -1.13
HPS4-209ENST00000466781 TRHRP34981 398 aaPredicted RBP8.01□□□□□ -1.13
HPS4-209ENST00000466781 PSMB3P49720 205 aa8.01□□□□□ -1.13
HPS4-209ENST00000466781 C1orf140Q5VVS0 124 aa8.01□□□□□ -1.13
HPS4-209ENST00000466781 DHRS9Q9BPW9 319 aa8.01□□□□□ -1.13
HPS4-209ENST00000466781 LOXL2Q9Y4K0 774 aa8.01□□□□□ -1.13
HPS4-209ENST00000466781 SGCEO43556 437 aa8□□□□□ -1.13
HPS4-209ENST00000466781 SLC5A12Q1EHB4 618 aa8□□□□□ -1.13
HPS4-209ENST00000466781 TMEM41BQ5BJD5 291 aa8□□□□□ -1.13
HPS4-209ENST00000466781 WDR88Q6ZMY6 472 aa8□□□□□ -1.13
HPS4-209ENST00000466781 DCXRQ7Z4W1 244 aa8□□□□□ -1.13
HPS4-209ENST00000466781 PGBD5Q8N414 524 aa8□□□□□ -1.13
HPS4-209ENST00000466781 NMNAT3Q96T66 252 aa8□□□□□ -1.13
HPS4-209ENST00000466781 C6orf106Q9H6K1 298 aaPredicted RBP8□□□□□ -1.13
HPS4-209ENST00000466781 MYH7BA7E2Y1 1941 aa8□□□□□ -1.13
HPS4-209ENST00000466781 IGHV3-20A0A0C4DH32 117 aa8□□□□□ -1.13
HPS4-209ENST00000466781 RPS10-NUDT3A0A1W2PQS6 291 aa8□□□□□ -1.13
HPS4-209ENST00000466781 KRBA1A5PL33 1030 aa8□□□□□ -1.13
HPS4-209ENST00000466781 OR6C65A6NJZ3 312 aa8□□□□□ -1.13
HPS4-209ENST00000466781 MBTPS2O43462 519 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms