RNA–Protein interactions for RNA: ENST00000464541.5

PTCD3-205, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 890 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-205ENST00000464541 CCDC94Q9BW85 323 aaPredicted RBP3.57□□□□□ -1.84
PTCD3-205ENST00000464541 KRTAP4-3Q9BYR4 195 aa3.57□□□□□ -1.84
PTCD3-205ENST00000464541 STOX2Q9P2F5 926 aaPredicted RBP3.57□□□□□ -1.84
PTCD3-205ENST00000464541 PITPNC1Q9UKF7 332 aa3.57□□□□□ -1.84
PTCD3-205ENST00000464541 STAP1Q9ULZ2 295 aa3.57□□□□□ -1.84
PTCD3-205ENST00000464541 PSG11Q9UQ72 335 aa3.57□□□□□ -1.84
PTCD3-205ENST00000464541 RPL36Q9Y3U8 105 aaKnown RBP3.57□□□□□ -1.84
PTCD3-205ENST00000464541 MTCL1Q9Y4B5 1905 aaKnown RBP3.56□□□□□ -1.84
PTCD3-205ENST00000464541 TRBV11-1A0A0K0K1C0 115 aa3.56□□□□□ -1.84
PTCD3-205ENST00000464541 RRP8O43159 456 aaKnown RBP3.56□□□□□ -1.84
PTCD3-205ENST00000464541 PFKFB2O60825 505 aa3.56□□□□□ -1.84
PTCD3-205ENST00000464541 NIPSNAP2O75323 286 aa3.56□□□□□ -1.84
PTCD3-205ENST00000464541 MOSP00540 346 aa3.56□□□□□ -1.84
PTCD3-205ENST00000464541 KLK3P07288 261 aaPredicted RBP3.56□□□□□ -1.84
PTCD3-205ENST00000464541 ERCC1P07992 297 aaPredicted RBP3.56□□□□□ -1.84
PTCD3-205ENST00000464541 GIPP09681 153 aaPredicted RBP3.56□□□□□ -1.84
PTCD3-205ENST00000464541 TDGF1P13385 188 aa3.56□□□□□ -1.84
PTCD3-205ENST00000464541 CCNB1P14635 433 aa3.56□□□□□ -1.84
PTCD3-205ENST00000464541 HMOX2P30519 316 aa3.56□□□□□ -1.84
PTCD3-205ENST00000464541 RPS5P46782 204 aaKnown RBP3.56□□□□□ -1.84
PTCD3-205ENST00000464541 GYG1P46976 350 aa3.56□□□□□ -1.84
PTCD3-205ENST00000464541 TFPI2P48307 235 aa3.56□□□□□ -1.84
PTCD3-205ENST00000464541 TDGF1P3P51864 188 aa3.56□□□□□ -1.84
PTCD3-205ENST00000464541 CCNG1P51959 295 aa3.56□□□□□ -1.84
PTCD3-205ENST00000464541 PKNOX1P55347 436 aa3.56□□□□□ -1.84
PTCD3-205ENST00000464541 LINC00315P59091 139 aa3.56□□□□□ -1.84
PTCD3-205ENST00000464541 OGDHQ02218 1023 aa3.56□□□□□ -1.84
PTCD3-205ENST00000464541 XRCC4Q13426 336 aa3.56□□□□□ -1.84
PTCD3-205ENST00000464541 MICBQ29980 383 aa3.56□□□□□ -1.84
PTCD3-205ENST00000464541 TMEM255AQ5JRV8 349 aa3.56□□□□□ -1.84
PTCD3-205ENST00000464541 CTRB2Q6GPI1 263 aa3.56□□□□□ -1.84
PTCD3-205ENST00000464541 OR4F3Q6IEY1 312 aa3.56□□□□□ -1.84
PTCD3-205ENST00000464541 SLC25A25Q6KCM7 469 aa3.56□□□□□ -1.84
PTCD3-205ENST00000464541 ST13P4Q8IZP2 240 aaPredicted RBP3.56□□□□□ -1.84
PTCD3-205ENST00000464541 GTPBP8Q8N3Z3 284 aaPredicted RBP3.56□□□□□ -1.84
PTCD3-205ENST00000464541 DNAAF3Q8N9W5 541 aa3.56□□□□□ -1.84
PTCD3-205ENST00000464541 OR5T3Q8NGG3 340 aa3.56□□□□□ -1.84
PTCD3-205ENST00000464541 OR4D5Q8NGN0 318 aa3.56□□□□□ -1.84
PTCD3-205ENST00000464541 OR1L4Q8NGR5 311 aa3.56□□□□□ -1.84
PTCD3-205ENST00000464541 OR13C9Q8NGT0 318 aa3.56□□□□□ -1.84
PTCD3-205ENST00000464541 OR9G1Q8NH87 305 aa3.56□□□□□ -1.84
PTCD3-205ENST00000464541 ZNF596Q8TC21 504 aa3.56□□□□□ -1.84
PTCD3-205ENST00000464541 SCFD1Q8WVM8 642 aa3.56□□□□□ -1.84
PTCD3-205ENST00000464541 MAIP1Q8WWC4 291 aa3.56□□□□□ -1.84
PTCD3-205ENST00000464541 ELMO1Q92556 727 aa3.56□□□□□ -1.84
PTCD3-205ENST00000464541 ARPC1AQ92747 370 aa3.56□□□□□ -1.84
PTCD3-205ENST00000464541 TM4SF19Q96DZ7 209 aa3.56□□□□□ -1.84
PTCD3-205ENST00000464541 ZNF578Q96N58 590 aaPredicted RBP3.56□□□□□ -1.84
PTCD3-205ENST00000464541 CYTH2Q99418 400 aa3.56□□□□□ -1.84
PTCD3-205ENST00000464541 PARD6BQ9BYG5 372 aa3.56□□□□□ -1.84
PTCD3-205ENST00000464541 ANKRD60Q9BZ19 345 aa3.56□□□□□ -1.84
PTCD3-205ENST00000464541 RAB18Q9NP72 206 aa3.56□□□□□ -1.84
PTCD3-205ENST00000464541 MRPS30Q9NP92 439 aaKnown RBP3.56□□□□□ -1.84
PTCD3-205ENST00000464541 POLE4Q9NR33 117 aa3.56□□□□□ -1.84
PTCD3-205ENST00000464541 MTCH1Q9NZJ7 389 aa3.56□□□□□ -1.84
PTCD3-205ENST00000464541 IFNKQ9P0W0 207 aa3.56□□□□□ -1.84
PTCD3-205ENST00000464541 GAKO14976 1311 aa3.55□□□□□ -1.84
PTCD3-205ENST00000464541 MYO3BQ8WXR4 1341 aa3.55□□□□□ -1.84
PTCD3-205ENST00000464541 IGKV2-28A0A075B6P5 120 aa3.55□□□□□ -1.84
PTCD3-205ENST00000464541 A0A1B0GUH1 482 aa3.55□□□□□ -1.84
PTCD3-205ENST00000464541 LRP5LA4QPB2 252 aa3.55□□□□□ -1.84
PTCD3-205ENST00000464541 CCDC182A6NF36 153 aa3.55□□□□□ -1.84
PTCD3-205ENST00000464541 PDZK1P1A8MUH7 402 aa3.55□□□□□ -1.84
PTCD3-205ENST00000464541 ANKRD63C9JTQ0 380 aa3.55□□□□□ -1.84
PTCD3-205ENST00000464541 LOC110117498-PIK3R3F6TDL0 507 aa3.55□□□□□ -1.84
PTCD3-205ENST00000464541 TMX2-CTNND1H3BSU7 103 aa3.55□□□□□ -1.84
PTCD3-205ENST00000464541 LAD1O00515 517 aa3.55□□□□□ -1.84
PTCD3-205ENST00000464541 BCKDKO14874 412 aa3.55□□□□□ -1.84
PTCD3-205ENST00000464541 CLPXO76031 633 aa3.55□□□□□ -1.84
PTCD3-205ENST00000464541 CLDN9O95484 217 aa3.55□□□□□ -1.84
PTCD3-205ENST00000464541 IGKV2D-28P01615 120 aa3.55□□□□□ -1.84
PTCD3-205ENST00000464541 NPR2P20594 1047 aa3.55□□□□□ -1.84
PTCD3-205ENST00000464541 CCNOP22674 350 aa3.55□□□□□ -1.84
PTCD3-205ENST00000464541 RORAP35398 523 aa3.55□□□□□ -1.84
PTCD3-205ENST00000464541 CRYBB2P43320 205 aa3.55□□□□□ -1.84
PTCD3-205ENST00000464541 SLAQ13239 276 aa3.55□□□□□ -1.84
PTCD3-205ENST00000464541 GRB7Q14451 532 aa3.55□□□□□ -1.84
PTCD3-205ENST00000464541 BEX5Q5H9J7 111 aa3.55□□□□□ -1.84
PTCD3-205ENST00000464541 PDZK1Q5T2W1 519 aa3.55□□□□□ -1.84
PTCD3-205ENST00000464541 SCD5Q86SK9 330 aa3.55□□□□□ -1.84
PTCD3-205ENST00000464541 MFSD6LQ8IWD5 586 aa3.55□□□□□ -1.84
PTCD3-205ENST00000464541 SLC35F2Q8IXU6 374 aa3.55□□□□□ -1.84
PTCD3-205ENST00000464541 SLC38A6Q8IZM9 456 aa3.55□□□□□ -1.84
PTCD3-205ENST00000464541 DUSP18Q8NEJ0 188 aa3.55□□□□□ -1.84
PTCD3-205ENST00000464541 OR7G2Q8NG99 324 aa3.55□□□□□ -1.84
PTCD3-205ENST00000464541 OR10G9Q8NGN4 311 aa3.55□□□□□ -1.84
PTCD3-205ENST00000464541 ANGPTL6Q8NI99 470 aa3.55□□□□□ -1.84
PTCD3-205ENST00000464541 C10orf35Q96D05 121 aa3.55□□□□□ -1.84
PTCD3-205ENST00000464541 CERS2Q96G23 380 aa3.55□□□□□ -1.84
PTCD3-205ENST00000464541 FOPNLQ96NB1 174 aa3.55□□□□□ -1.84
PTCD3-205ENST00000464541 ELOVL6Q9H5J4 265 aa3.55□□□□□ -1.84
PTCD3-205ENST00000464541 AZI2Q9H6S1 392 aa3.55□□□□□ -1.84
PTCD3-205ENST00000464541 RANBP3Q9H6Z4 567 aaPredicted RBP3.55□□□□□ -1.84
PTCD3-205ENST00000464541 LYARQ9NX58 379 aaKnown RBP3.55□□□□□ -1.84
PTCD3-205ENST00000464541 PDS5BQ9NTI5 1447 aa3.54□□□□□ -1.84
PTCD3-205ENST00000464541 PNPLA6Q8IY17 1366 aa3.54□□□□□ -1.84
PTCD3-205ENST00000464541 A0A096LNJ9 63 aa3.54□□□□□ -1.84
PTCD3-205ENST00000464541 HAS3O00219 553 aa3.54□□□□□ -1.84
PTCD3-205ENST00000464541 DLGAP1O14490 977 aa3.54□□□□□ -1.84
PTCD3-205ENST00000464541 ZNF324O75467 553 aaPredicted RBP3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms