RNA–Protein interactions for RNA: ENST00000462494.5

ACTB-207, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 2,245 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-207ENST00000462494 LDOC1O95751 146 aaPredicted RBP15.29■□□□□ 0.04
ACTB-207ENST00000462494 ALDOBP05062 364 aa15.29■□□□□ 0.04
ACTB-207ENST00000462494 ABCD3P28288 659 aa15.29■□□□□ 0.04
ACTB-207ENST00000462494 EFNB2P52799 333 aa15.29■□□□□ 0.04
ACTB-207ENST00000462494 DCAF7P61962 342 aa15.29■□□□□ 0.04
ACTB-207ENST00000462494 HSD11B2P80365 405 aa15.29■□□□□ 0.04
ACTB-207ENST00000462494 SNTA1Q13424 505 aa15.29■□□□□ 0.04
ACTB-207ENST00000462494 ETFDHQ16134 617 aa15.29■□□□□ 0.04
ACTB-207ENST00000462494 GLDNQ6ZMI3 551 aaPredicted RBP15.29■□□□□ 0.04
ACTB-207ENST00000462494 SHISA6Q6ZSJ9 500 aa15.29■□□□□ 0.04
ACTB-207ENST00000462494 SLC29A4Q7RTT9 530 aa15.29■□□□□ 0.04
ACTB-207ENST00000462494 NUP54Q7Z3B4 507 aa15.29■□□□□ 0.04
ACTB-207ENST00000462494 CDH24Q86UP0 819 aa15.29■□□□□ 0.04
ACTB-207ENST00000462494 C15orf40Q8WUR7 153 aa15.29■□□□□ 0.04
ACTB-207ENST00000462494 DAZLQ92904 295 aaKnown RBP15.29■□□□□ 0.04
ACTB-207ENST00000462494 SORCS2Q96PQ0 1159 aa15.29■□□□□ 0.04
ACTB-207ENST00000462494 PTDSS2Q9BVG9 487 aa15.29■□□□□ 0.04
ACTB-207ENST00000462494 ZNF304Q9HCX3 659 aa15.29■□□□□ 0.04
ACTB-207ENST00000462494 NPTNQ9Y639 398 aa15.29■□□□□ 0.04
ACTB-207ENST00000462494 PCNX3Q9H6A9 2034 aa15.28■□□□□ 0.04
ACTB-207ENST00000462494 TMED7-TICAM2A0A0A6YYA0 188 aa15.28■□□□□ 0.04
ACTB-207ENST00000462494 ALG1L2C9J202 215 aa15.28■□□□□ 0.04
ACTB-207ENST00000462494 LMO7DNF2Z398 122 aa15.28■□□□□ 0.04
ACTB-207ENST00000462494 XRCC3O43542 346 aa15.28■□□□□ 0.04
ACTB-207ENST00000462494 RBBP9O75884 186 aa15.28■□□□□ 0.04
ACTB-207ENST00000462494 RPL27P61353 136 aaKnown RBP15.28■□□□□ 0.04
ACTB-207ENST00000462494 HNRNPKP61978 463 aaKnown RBP eCLIP15.28■□□□□ 0.042e-7■□□□□ 8.8
ACTB-207ENST00000462494 TSPAN5P62079 268 aa15.28■□□□□ 0.04
ACTB-207ENST00000462494 CAMK2BQ13554 666 aa15.28■□□□□ 0.04
ACTB-207ENST00000462494 SLC17A1Q14916 467 aa15.28■□□□□ 0.04
ACTB-207ENST00000462494 POU4F3Q15319 338 aa15.28■□□□□ 0.04
ACTB-207ENST00000462494 ESCO2Q56NI9 601 aa15.28■□□□□ 0.04
ACTB-207ENST00000462494 ARHGAP40Q5TG30 622 aa15.28■□□□□ 0.04
ACTB-207ENST00000462494 YOD1Q5VVQ6 348 aaPredicted RBP15.28■□□□□ 0.04
ACTB-207ENST00000462494 C17orf82Q86X59 251 aaPredicted RBP15.28■□□□□ 0.04
ACTB-207ENST00000462494 OR8B4Q96RC9 309 aa15.28■□□□□ 0.04
ACTB-207ENST00000462494 DPYSL5Q9BPU6 564 aa15.28■□□□□ 0.04
ACTB-207ENST00000462494 OR11A1Q9GZK7 315 aa15.28■□□□□ 0.04
ACTB-207ENST00000462494 TMED7Q9Y3B3 224 aa15.28■□□□□ 0.04
ACTB-207ENST00000462494 MEIS3P1A6NDR6 274 aa15.28■□□□□ 0.04
ACTB-207ENST00000462494 G3V3Q6 166 aa15.28■□□□□ 0.04
ACTB-207ENST00000462494 EIF4E2O60573 245 aaKnown RBP15.28■□□□□ 0.04
ACTB-207ENST00000462494 MPC2O95563 127 aa15.28■□□□□ 0.04
ACTB-207ENST00000462494 FOLR1P15328 257 aa15.28■□□□□ 0.04
ACTB-207ENST00000462494 FOXL2P58012 376 aa15.28■□□□□ 0.04
ACTB-207ENST00000462494 ADAM8P78325 824 aa15.28■□□□□ 0.04
ACTB-207ENST00000462494 MELKQ14680 651 aa15.28■□□□□ 0.04
ACTB-207ENST00000462494 SGCBQ16585 318 aa15.28■□□□□ 0.04
ACTB-207ENST00000462494 CLPPQ16740 277 aaPredicted RBP15.28■□□□□ 0.04
ACTB-207ENST00000462494 OR5M10Q6IEU7 315 aa15.28■□□□□ 0.04
ACTB-207ENST00000462494 MCHR2Q969V1 340 aa15.28■□□□□ 0.04
ACTB-207ENST00000462494 NPDC1Q9NQX5 325 aaPredicted RBP15.28■□□□□ 0.04
ACTB-207ENST00000462494 DIABLOQ9NR28 239 aa15.28■□□□□ 0.04
ACTB-207ENST00000462494 CA10Q9NS85 328 aa15.28■□□□□ 0.04
ACTB-207ENST00000462494 CA14Q9ULX7 337 aa15.28■□□□□ 0.04
ACTB-207ENST00000462494 PPIEQ9UNP9 301 aaKnown RBP15.28■□□□□ 0.04
ACTB-207ENST00000462494 CREBL2O60519 120 aaPredicted RBP15.27■□□□□ 0.04
ACTB-207ENST00000462494 ICMTO60725 284 aa15.27■□□□□ 0.04
ACTB-207ENST00000462494 MYF5P13349 255 aa15.27■□□□□ 0.04
ACTB-207ENST00000462494 CTLA4P16410 223 aa15.27■□□□□ 0.04
ACTB-207ENST00000462494 POU3F4P49335 361 aa15.27■□□□□ 0.04
ACTB-207ENST00000462494 POLR2HP52434 150 aaKnown RBP15.27■□□□□ 0.04
ACTB-207ENST00000462494 PSMA6P60900 246 aaKnown RBP15.27■□□□□ 0.04
ACTB-207ENST00000462494 INSM1Q01101 510 aaPredicted RBP15.27■□□□□ 0.04
ACTB-207ENST00000462494 EXOSC2Q13868 293 aaKnown RBP15.27■□□□□ 0.04
ACTB-207ENST00000462494 OR7E24Q6IFN5 339 aa15.27■□□□□ 0.04
ACTB-207ENST00000462494 SLC18B1Q6NT16 456 aa15.27■□□□□ 0.04
ACTB-207ENST00000462494 KRT77Q7Z794 578 aa15.27■□□□□ 0.04
ACTB-207ENST00000462494 ELMOD2Q8IZ81 293 aa15.27■□□□□ 0.04
ACTB-207ENST00000462494 KDM8Q8N371 416 aa15.27■□□□□ 0.04
ACTB-207ENST00000462494 DUSP19Q8WTR2 217 aa15.27■□□□□ 0.04
ACTB-207ENST00000462494 MVB12AQ96EY5 273 aa15.27■□□□□ 0.04
ACTB-207ENST00000462494 CHRNA10Q9GZZ6 450 aa15.27■□□□□ 0.04
ACTB-207ENST00000462494 MRPL22Q9NWU5 206 aaKnown RBP15.27■□□□□ 0.04
ACTB-207ENST00000462494 SDK1Q7Z5N4 2213 aa15.27■□□□□ 0.03
ACTB-207ENST00000462494 MEN1O00255 615 aa15.27■□□□□ 0.03
ACTB-207ENST00000462494 CTAG2O75638 210 aa15.27■□□□□ 0.03
ACTB-207ENST00000462494 NDUFB6O95139 128 aa15.27■□□□□ 0.03
ACTB-207ENST00000462494 PNPP00491 289 aa15.27■□□□□ 0.03
ACTB-207ENST00000462494 MT-ATP6P00846 226 aa15.27■□□□□ 0.03
ACTB-207ENST00000462494 ITGA5P08648 1049 aa15.27■□□□□ 0.03
ACTB-207ENST00000462494 MNDAP41218 407 aa15.27■□□□□ 0.03
ACTB-207ENST00000462494 GUCA2AQ02747 115 aa15.27■□□□□ 0.03
ACTB-207ENST00000462494 C1orf140Q5VVS0 124 aa15.27■□□□□ 0.03
ACTB-207ENST00000462494 SEZ6L2Q6UXD5 910 aa15.27■□□□□ 0.03
ACTB-207ENST00000462494 LANCL3Q6ZV70 420 aa15.27■□□□□ 0.03
ACTB-207ENST00000462494 MDGA2Q7Z553 956 aa15.27■□□□□ 0.03
ACTB-207ENST00000462494 ADGRG3Q86Y34 549 aa15.27■□□□□ 0.03
ACTB-207ENST00000462494 ZNF679Q8IYX0 411 aa15.27■□□□□ 0.03
ACTB-207ENST00000462494 PLPP7Q8NBV4 271 aa15.27■□□□□ 0.03
ACTB-207ENST00000462494 OR52B4Q8NGK2 314 aa15.27■□□□□ 0.03
ACTB-207ENST00000462494 OR1N1Q8NGS0 311 aa15.27■□□□□ 0.03
ACTB-207ENST00000462494 GPN1Q9HCN4 374 aaPredicted RBP15.27■□□□□ 0.03
ACTB-207ENST00000462494 TRAV18A0A075B6X5 111 aa15.26■□□□□ 0.03
ACTB-207ENST00000462494 A0A1W2PQD3 144 aa15.26■□□□□ 0.03
ACTB-207ENST00000462494 GGT3PA6NGU5 568 aa15.26■□□□□ 0.03
ACTB-207ENST00000462494 PYCARD-AS1I3L0S3 204 aa15.26■□□□□ 0.03
ACTB-207ENST00000462494 IFNA7P01567 189 aa15.26■□□□□ 0.03
ACTB-207ENST00000462494 IFNGR1P15260 489 aa15.26■□□□□ 0.03
ACTB-207ENST00000462494 CSRP1P21291 193 aaKnown RBP15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms