RNA–Protein interactions for RNA: ENST00000462258.1

SF3A3-204, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-204ENST00000462258 SLC16A14Q7RTX9 510 aa8.78□□□□□ -1
SF3A3-204ENST00000462258 CPLX4Q7Z7G2 160 aa8.78□□□□□ -1
SF3A3-204ENST00000462258 DPPA2Q7Z7J5 298 aa8.78□□□□□ -1
SF3A3-204ENST00000462258 IGFN1Q86VF2 1251 aa8.78□□□□□ -1
SF3A3-204ENST00000462258 CYP4Z1Q86W10 505 aa8.78□□□□□ -1
SF3A3-204ENST00000462258 MEX3DQ86XN8 651 aaKnown RBP8.78□□□□□ -1
SF3A3-204ENST00000462258 CDK20Q8IZL9 346 aa8.78□□□□□ -1
SF3A3-204ENST00000462258 OR13C2Q8NGS9 318 aa8.78□□□□□ -1
SF3A3-204ENST00000462258 FGFBP3Q8TAT2 258 aa8.78□□□□□ -1
SF3A3-204ENST00000462258 ACOT11Q8WXI4 607 aaPredicted RBP8.78□□□□□ -1
SF3A3-204ENST00000462258 HDAC2Q92769 488 aaKnown RBP8.78□□□□□ -1
SF3A3-204ENST00000462258 MRPL24Q96A35 216 aaKnown RBP8.78□□□□□ -1
SF3A3-204ENST00000462258 RAB1BQ9H0U4 201 aa8.78□□□□□ -1
SF3A3-204ENST00000462258 TXNIPQ9H3M7 391 aa8.78□□□□□ -1
SF3A3-204ENST00000462258 SMURF2Q9HAU4 748 aa8.78□□□□□ -1
SF3A3-204ENST00000462258 EGFL7Q9UHF1 273 aa8.78□□□□□ -1
SF3A3-204ENST00000462258 SLC7A8Q9UHI5 535 aa8.78□□□□□ -1
SF3A3-204ENST00000462258 RPS6KA6Q9UK32 745 aa8.78□□□□□ -1
SF3A3-204ENST00000462258 CMAHPQ9Y471 501 aa8.78□□□□□ -1
SF3A3-204ENST00000462258 SPEF1Q9Y4P9 236 aa8.78□□□□□ -1
SF3A3-204ENST00000462258 JMJD1CQ15652 2540 aa8.78□□□□□ -1
SF3A3-204ENST00000462258 RTTNQ86VV8 2226 aa8.77□□□□□ -1.01
SF3A3-204ENST00000462258 GMNCA6NCL1 334 aa8.77□□□□□ -1.01
SF3A3-204ENST00000462258 EFCAB9A8MZ26 197 aa8.77□□□□□ -1.01
SF3A3-204ENST00000462258 SERPINA5P05154 406 aa8.77□□□□□ -1.01
SF3A3-204ENST00000462258 ZNF16P17020 682 aaPredicted RBP8.77□□□□□ -1.01
SF3A3-204ENST00000462258 GLRXP35754 106 aa8.77□□□□□ -1.01
SF3A3-204ENST00000462258 SLC9A3P48764 834 aa8.77□□□□□ -1.01
SF3A3-204ENST00000462258 RPL27P61353 136 aaKnown RBP8.77□□□□□ -1.01
SF3A3-204ENST00000462258 GNGT1P63211 74 aa8.77□□□□□ -1.01
SF3A3-204ENST00000462258 PRKCDQ05655 676 aa8.77□□□□□ -1.01
SF3A3-204ENST00000462258 LAPTM4AQ15012 233 aa8.77□□□□□ -1.01
SF3A3-204ENST00000462258 TAF11Q15544 211 aa8.77□□□□□ -1.01
SF3A3-204ENST00000462258 MSMPQ1L6U9 139 aa8.77□□□□□ -1.01
SF3A3-204ENST00000462258 C6orf52Q5T4I8 152 aa8.77□□□□□ -1.01
SF3A3-204ENST00000462258 FAM205BPQ63HN1 556 aa8.77□□□□□ -1.01
SF3A3-204ENST00000462258 MBOAT2Q6ZWT7 520 aa8.77□□□□□ -1.01
SF3A3-204ENST00000462258 OAFQ86UD1 273 aa8.77□□□□□ -1.01
SF3A3-204ENST00000462258 LRRC18Q8N456 261 aa8.77□□□□□ -1.01
SF3A3-204ENST00000462258 RNF148Q8N7C7 305 aa8.77□□□□□ -1.01
SF3A3-204ENST00000462258 SLC30A7Q8NEW0 376 aa8.77□□□□□ -1.01
SF3A3-204ENST00000462258 OR51A7Q8NH64 312 aa8.77□□□□□ -1.01
SF3A3-204ENST00000462258 NMD3Q96D46 503 aaKnown RBP8.77□□□□□ -1.01
SF3A3-204ENST00000462258 TSPAN32Q96QS1 320 aa8.77□□□□□ -1.01
SF3A3-204ENST00000462258 TNFRSF13CQ96RJ3 184 aa8.77□□□□□ -1.01
SF3A3-204ENST00000462258 KCNK17Q96T54 332 aa8.77□□□□□ -1.01
SF3A3-204ENST00000462258 DOK1Q99704 481 aa8.77□□□□□ -1.01
SF3A3-204ENST00000462258 ALG12Q9BV10 488 aa8.77□□□□□ -1.01
SF3A3-204ENST00000462258 MRPL37Q9BZE1 423 aaKnown RBP8.77□□□□□ -1.01
SF3A3-204ENST00000462258 C1orf198Q9H425 327 aa8.77□□□□□ -1.01
SF3A3-204ENST00000462258 ANKRD19PQ9H560 264 aa8.77□□□□□ -1.01
SF3A3-204ENST00000462258 RNF121Q9H920 327 aa8.77□□□□□ -1.01
SF3A3-204ENST00000462258 ADA2Q9NZK5 511 aa8.77□□□□□ -1.01
SF3A3-204ENST00000462258 SAMD4AQ9UPU9 718 aaKnown RBP8.77□□□□□ -1.01
SF3A3-204ENST00000462258 ENPP4Q9Y6X5 453 aa8.77□□□□□ -1.01
SF3A3-204ENST00000462258 CUBNO60494 3623 aa8.76□□□□□ -1.01
SF3A3-204ENST00000462258 A0A087WUU8 490 aa8.76□□□□□ -1.01
SF3A3-204ENST00000462258 IGKV1D-43A0A0B4J1Z2 117 aa8.76□□□□□ -1.01
SF3A3-204ENST00000462258 LOC390937A0A1W2PQ73 354 aa8.76□□□□□ -1.01
SF3A3-204ENST00000462258 TMEM129A0AVI4 362 aa8.76□□□□□ -1.01
SF3A3-204ENST00000462258 SH3PXD2BA1X283 911 aa8.76□□□□□ -1.01
SF3A3-204ENST00000462258 VWC2LB2RUY7 222 aa8.76□□□□□ -1.01
SF3A3-204ENST00000462258 M0R233 179 aa8.76□□□□□ -1.01
SF3A3-204ENST00000462258 USF1P22415 310 aaPredicted RBP8.76□□□□□ -1.01
SF3A3-204ENST00000462258 CDAP32320 146 aa8.76□□□□□ -1.01
SF3A3-204ENST00000462258 GYS2P54840 703 aa8.76□□□□□ -1.01
SF3A3-204ENST00000462258 CTXN1P60606 82 aa8.76□□□□□ -1.01
SF3A3-204ENST00000462258 MRPS34P82930 218 aaKnown RBP8.76□□□□□ -1.01
SF3A3-204ENST00000462258 VLDLRP98155 873 aa8.76□□□□□ -1.01
SF3A3-204ENST00000462258 HSF2Q03933 536 aa8.76□□□□□ -1.01
SF3A3-204ENST00000462258 GGTLC2Q14390 218 aa8.76□□□□□ -1.01
SF3A3-204ENST00000462258 FXNQ16595 210 aa8.76□□□□□ -1.01
SF3A3-204ENST00000462258 TBC1D28Q2M2D7 210 aa8.76□□□□□ -1.01
SF3A3-204ENST00000462258 ANKDD1AQ495B1 522 aa8.76□□□□□ -1.01
SF3A3-204ENST00000462258 FGD3Q5JSP0 725 aa8.76□□□□□ -1.01
SF3A3-204ENST00000462258 TSEN54Q7Z6J9 526 aaKnown RBP8.76□□□□□ -1.01
SF3A3-204ENST00000462258 RNF113BQ8IZP6 322 aaKnown RBP8.76□□□□□ -1.01
SF3A3-204ENST00000462258 ZCCHC24Q8N2G6 241 aaKnown RBP8.76□□□□□ -1.01
SF3A3-204ENST00000462258 PAQR4Q8N4S7 273 aaPredicted RBP8.76□□□□□ -1.01
SF3A3-204ENST00000462258 FAM86B1Q8N7N1 296 aa8.76□□□□□ -1.01
SF3A3-204ENST00000462258 CLDN22Q8N7P3 220 aa8.76□□□□□ -1.01
SF3A3-204ENST00000462258 LRRC75AQ8NAA5 344 aa8.76□□□□□ -1.01
SF3A3-204ENST00000462258 FAM156AQ8NDB6 213 aa8.76□□□□□ -1.01
SF3A3-204ENST00000462258 ZNF519Q8TB69 540 aa8.76□□□□□ -1.01
SF3A3-204ENST00000462258 FNDC8Q8TC99 324 aa8.76□□□□□ -1.01
SF3A3-204ENST00000462258 SLC7A13Q8TCU3 470 aa8.76□□□□□ -1.01
SF3A3-204ENST00000462258 NEU4Q8WWR8 484 aaPredicted RBP8.76□□□□□ -1.01
SF3A3-204ENST00000462258 NSMAFQ92636 917 aa8.76□□□□□ -1.01
SF3A3-204ENST00000462258 NABP1Q96AH0 204 aa8.76□□□□□ -1.01
SF3A3-204ENST00000462258 FAM46AQ96IP4 442 aaKnown RBP8.76□□□□□ -1.01
SF3A3-204ENST00000462258 SYT3Q9BQG1 590 aa8.76□□□□□ -1.01
SF3A3-204ENST00000462258 NDEL1Q9GZM8 345 aa8.76□□□□□ -1.01
SF3A3-204ENST00000462258 TPK1Q9H3S4 243 aa8.76□□□□□ -1.01
SF3A3-204ENST00000462258 CDH20Q9HBT6 801 aa8.76□□□□□ -1.01
SF3A3-204ENST00000462258 YAE1D1Q9NRH1 226 aa8.76□□□□□ -1.01
SF3A3-204ENST00000462258 MAGEL2Q9UJ55 1249 aa8.76□□□□□ -1.01
SF3A3-204ENST00000462258 ZNF346Q9UL40 294 aaKnown RBP8.76□□□□□ -1.01
SF3A3-204ENST00000462258 TMEM5Q9Y2B1 443 aa8.76□□□□□ -1.01
SF3A3-204ENST00000462258 UGT2A1Q9Y4X1 527 aa8.76□□□□□ -1.01
SF3A3-204ENST00000462258 V9GYQ6 96 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms