RNA–Protein interactions for RNA: ENST00000461489.1

COL21A1-205, Transcript of collagen type XXI alpha 1 chain, humanhuman

TSL 4

Gene COL21A1, Length 555 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-205ENST00000461489 PRORYQ9H606 182 aa1.9□□□□□ -2.11
COL21A1-205ENST00000461489 HAUS4Q9H6D7 363 aa1.9□□□□□ -2.11
COL21A1-205ENST00000461489 TRIM45Q9H8W5 580 aaPredicted RBP1.9□□□□□ -2.11
COL21A1-205ENST00000461489 COPS7BQ9H9Q2 264 aaPredicted RBP1.9□□□□□ -2.11
COL21A1-205ENST00000461489 GPATCH2LQ9NWQ4 482 aa1.9□□□□□ -2.11
COL21A1-205ENST00000461489 HRASLS2Q9NWW9 162 aa1.9□□□□□ -2.11
COL21A1-205ENST00000461489 PAQR5Q9NXK6 330 aaPredicted RBP1.9□□□□□ -2.11
COL21A1-205ENST00000461489 MTRF1LQ9UGC7 380 aaKnown RBP1.9□□□□□ -2.11
COL21A1-205ENST00000461489 PHF11Q9UIL8 331 aa1.9□□□□□ -2.11
COL21A1-205ENST00000461489 PSME2Q9UL46 239 aa1.9□□□□□ -2.11
COL21A1-205ENST00000461489 FARSAQ9Y285 508 aaKnown RBP1.9□□□□□ -2.11
COL21A1-205ENST00000461489 ASF1AQ9Y294 204 aa1.9□□□□□ -2.11
COL21A1-205ENST00000461489 PPIL1Q9Y3C6 166 aa1.9□□□□□ -2.11
COL21A1-205ENST00000461489 ALG6Q9Y672 507 aa1.9□□□□□ -2.11
COL21A1-205ENST00000461489 POMT1Q9Y6A1 747 aa1.9□□□□□ -2.11
COL21A1-205ENST00000461489 BRCA2P51587 3418 aa1.89□□□□□ -2.11
COL21A1-205ENST00000461489 RIF1Q5UIP0 2472 aaKnown RBP1.89□□□□□ -2.11
COL21A1-205ENST00000461489 NLRC5Q86WI3 1866 aa1.89□□□□□ -2.11
COL21A1-205ENST00000461489 IGHV1OR21-1A0A087WYE8 117 aa1.89□□□□□ -2.11
COL21A1-205ENST00000461489 NSG1A0A0A6YYJ2 146 aa1.89□□□□□ -2.11
COL21A1-205ENST00000461489 A0A0J9YY10 115 aa1.89□□□□□ -2.11
COL21A1-205ENST00000461489 A0A1B0GX78 115 aa1.89□□□□□ -2.11
COL21A1-205ENST00000461489 SYCE1LA8MT33 242 aa1.89□□□□□ -2.11
COL21A1-205ENST00000461489 FAM166BA8MTA8 275 aa1.89□□□□□ -2.11
COL21A1-205ENST00000461489 HMGB1P1B2RPK0 211 aaPredicted RBP1.89□□□□□ -2.11
COL21A1-205ENST00000461489 TP53I11O14683 189 aa1.89□□□□□ -2.11
COL21A1-205ENST00000461489 PRMT5O14744 637 aaPredicted RBP1.89□□□□□ -2.11
COL21A1-205ENST00000461489 CASKO14936 926 aa1.89□□□□□ -2.11
COL21A1-205ENST00000461489 TNRC18O15417 2968 aaPredicted RBP1.89□□□□□ -2.11
COL21A1-205ENST00000461489 UGT1A9O60656 530 aa1.89□□□□□ -2.11
COL21A1-205ENST00000461489 SDC3O75056 442 aa1.89□□□□□ -2.11
COL21A1-205ENST00000461489 BCAS2O75934 225 aaPredicted RBP1.89□□□□□ -2.11
COL21A1-205ENST00000461489 OR2B3O76000 313 aa1.89□□□□□ -2.11
COL21A1-205ENST00000461489 C8GP07360 202 aa1.89□□□□□ -2.11
COL21A1-205ENST00000461489 HEXBP07686 556 aa1.89□□□□□ -2.11
COL21A1-205ENST00000461489 PABPC4LP0CB38 370 aaKnown RBP1.89□□□□□ -2.11
COL21A1-205ENST00000461489 MLNP12872 115 aa1.89□□□□□ -2.11
COL21A1-205ENST00000461489 ATP1B2P14415 290 aaPredicted RBP1.89□□□□□ -2.11
COL21A1-205ENST00000461489 UQCRBP14927 111 aa1.89□□□□□ -2.11
COL21A1-205ENST00000461489 NELFEP18615 380 aaKnown RBP1.89□□□□□ -2.11
COL21A1-205ENST00000461489 FKBP2P26885 142 aaKnown RBP1.89□□□□□ -2.11
COL21A1-205ENST00000461489 RPA3P35244 121 aaPredicted RBP1.89□□□□□ -2.11
COL21A1-205ENST00000461489 MAGEA1P43355 309 aa1.89□□□□□ -2.11
COL21A1-205ENST00000461489 SPINT3P49223 89 aa1.89□□□□□ -2.11
COL21A1-205ENST00000461489 STC1P52823 247 aa1.89□□□□□ -2.11
COL21A1-205ENST00000461489 ARFIP1P53367 373 aa1.89□□□□□ -2.11
COL21A1-205ENST00000461489 HADHBP55084 474 aaKnown RBP1.89□□□□□ -2.11
COL21A1-205ENST00000461489 SCN1BQ07699 218 aa1.89□□□□□ -2.11
COL21A1-205ENST00000461489 ACTN3Q08043 901 aaPredicted RBP1.89□□□□□ -2.11
COL21A1-205ENST00000461489 SRSF5Q13243 272 aaKnown RBP1.89□□□□□ -2.11
COL21A1-205ENST00000461489 NAB1Q13506 487 aa1.89□□□□□ -2.11
COL21A1-205ENST00000461489 FAM53BQ14153 422 aa1.89□□□□□ -2.11
COL21A1-205ENST00000461489 RCAN2Q14206 197 aa1.89□□□□□ -2.11
COL21A1-205ENST00000461489 FZD2Q14332 565 aa1.89□□□□□ -2.11
COL21A1-205ENST00000461489 IRF4Q15306 451 aa1.89□□□□□ -2.11
COL21A1-205ENST00000461489 PARP6Q2NL67 630 aa1.89□□□□□ -2.11
COL21A1-205ENST00000461489 ANKRD20A4Q4UJ75 823 aa1.89□□□□□ -2.11
COL21A1-205ENST00000461489 BCL7AQ4VC05 210 aa1.89□□□□□ -2.11
COL21A1-205ENST00000461489 ANKRD20A2Q5SQ80 823 aa1.89□□□□□ -2.11
COL21A1-205ENST00000461489 ANKRD20A1Q5TYW2 823 aa1.89□□□□□ -2.11
COL21A1-205ENST00000461489 ANKRD20A3Q5VUR7 823 aa1.89□□□□□ -2.11
COL21A1-205ENST00000461489 METTL11BQ5VVY1 283 aa1.89□□□□□ -2.11
COL21A1-205ENST00000461489 LRRC66Q68CR7 880 aa1.89□□□□□ -2.11
COL21A1-205ENST00000461489 CAVIN1Q6NZI2 390 aaKnown RBP1.89□□□□□ -2.11
COL21A1-205ENST00000461489 IYDQ6PHW0 289 aa1.89□□□□□ -2.11
COL21A1-205ENST00000461489 WDR59Q6PJI9 974 aa1.89□□□□□ -2.11
COL21A1-205ENST00000461489 C16orf54Q6UWD8 224 aa1.89□□□□□ -2.11
COL21A1-205ENST00000461489 CD164L2Q6UWJ8 174 aa1.89□□□□□ -2.11
COL21A1-205ENST00000461489 TMEM26Q6ZUK4 368 aa1.89□□□□□ -2.11
COL21A1-205ENST00000461489 TAS2R42Q7RTR8 314 aa1.89□□□□□ -2.11
COL21A1-205ENST00000461489 LINC01551Q86U37 167 aa1.89□□□□□ -2.11
COL21A1-205ENST00000461489 LCA5Q86VQ0 697 aa1.89□□□□□ -2.11
COL21A1-205ENST00000461489 KATNAL2Q8IYT4 538 aa1.89□□□□□ -2.11
COL21A1-205ENST00000461489 PDIK1LQ8N165 341 aa1.89□□□□□ -2.11
COL21A1-205ENST00000461489 LIX1Q8N485 282 aa1.89□□□□□ -2.11
COL21A1-205ENST00000461489 DEFB119Q8N690 84 aa1.89□□□□□ -2.11
COL21A1-205ENST00000461489 ST6GALNAC3Q8NDV1 305 aa1.89□□□□□ -2.11
COL21A1-205ENST00000461489 MNS1Q8NEH6 495 aa1.89□□□□□ -2.11
COL21A1-205ENST00000461489 GOT1L1Q8NHS2 421 aaPredicted RBP1.89□□□□□ -2.11
COL21A1-205ENST00000461489 SLC22A8Q8TCC7 542 aa1.89□□□□□ -2.11
COL21A1-205ENST00000461489 HTR3CQ8WXA8 447 aa1.89□□□□□ -2.11
COL21A1-205ENST00000461489 NDRG1Q92597 394 aaKnown RBP1.89□□□□□ -2.11
COL21A1-205ENST00000461489 CORO2AQ92828 525 aa1.89□□□□□ -2.11
COL21A1-205ENST00000461489 ART4Q93070 314 aa1.89□□□□□ -2.11
COL21A1-205ENST00000461489 TCEAL3Q969E4 200 aa1.89□□□□□ -2.11
COL21A1-205ENST00000461489 ECHDC3Q96DC8 303 aa1.89□□□□□ -2.11
COL21A1-205ENST00000461489 DNAJA3Q96EY1 480 aa1.89□□□□□ -2.11
COL21A1-205ENST00000461489 CABS1Q96KC9 395 aa1.89□□□□□ -2.11
COL21A1-205ENST00000461489 C9orf72Q96LT7 481 aa1.89□□□□□ -2.11
COL21A1-205ENST00000461489 C12orf66Q96MD2 445 aa1.89□□□□□ -2.11
COL21A1-205ENST00000461489 ZFP3Q96NJ6 502 aa1.89□□□□□ -2.11
COL21A1-205ENST00000461489 RNF157Q96PX1 679 aa1.89□□□□□ -2.11
COL21A1-205ENST00000461489 WRAP53Q9BUR4 548 aaKnown RBP1.89□□□□□ -2.11
COL21A1-205ENST00000461489 NTMT1Q9BV86 223 aa1.89□□□□□ -2.11
COL21A1-205ENST00000461489 NMNAT2Q9BZQ4 307 aa1.89□□□□□ -2.11
COL21A1-205ENST00000461489 DRC3Q9H069 523 aa1.89□□□□□ -2.11
COL21A1-205ENST00000461489 RAB17Q9H0T7 212 aa1.89□□□□□ -2.11
COL21A1-205ENST00000461489 ABCG8Q9H221 673 aa1.89□□□□□ -2.11
COL21A1-205ENST00000461489 LRRC19Q9H756 370 aa1.89□□□□□ -2.11
COL21A1-205ENST00000461489 KIR3DX1Q9H7L2 352 aa1.89□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms