RNA–Protein interactions for RNA: ENST00000460928.1

ATPAF1-203, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-203ENST00000460928 ENTHD1Q8IYW4 607 aa4.33□□□□□ -1.72
ATPAF1-203ENST00000460928 FBXW8Q8N3Y1 598 aa4.33□□□□□ -1.72
ATPAF1-203ENST00000460928 ZNF321PQ8N8H1 164 aa4.33□□□□□ -1.72
ATPAF1-203ENST00000460928 ACOT4Q8N9L9 421 aa4.33□□□□□ -1.72
ATPAF1-203ENST00000460928 POGLUT1Q8NBL1 392 aa4.33□□□□□ -1.72
ATPAF1-203ENST00000460928 ZNF248Q8NDW4 579 aa4.33□□□□□ -1.72
ATPAF1-203ENST00000460928 OR2L5Q8NG80 312 aa4.33□□□□□ -1.72
ATPAF1-203ENST00000460928 OR1M1Q8NGA1 313 aa4.33□□□□□ -1.72
ATPAF1-203ENST00000460928 RDH11Q8TC12 318 aa4.33□□□□□ -1.72
ATPAF1-203ENST00000460928 ELP5Q8TE02 316 aa4.33□□□□□ -1.72
ATPAF1-203ENST00000460928 WIPF2Q8TF74 440 aaPredicted RBP4.33□□□□□ -1.72
ATPAF1-203ENST00000460928 PROX1Q92786 737 aa4.33□□□□□ -1.72
ATPAF1-203ENST00000460928 TMCO6Q96DC7 493 aa4.33□□□□□ -1.72
ATPAF1-203ENST00000460928 MRPL48Q96GC5 212 aaKnown RBP4.33□□□□□ -1.72
ATPAF1-203ENST00000460928 ZNF48Q96MX3 618 aaPredicted RBP4.33□□□□□ -1.72
ATPAF1-203ENST00000460928 DACH2Q96NX9 599 aa4.33□□□□□ -1.72
ATPAF1-203ENST00000460928 CCNL2Q96S94 520 aaPredicted RBP4.33□□□□□ -1.72
ATPAF1-203ENST00000460928 ABHD1Q96SE0 405 aa4.33□□□□□ -1.72
ATPAF1-203ENST00000460928 CCDC32Q9BV29 185 aa4.33□□□□□ -1.72
ATPAF1-203ENST00000460928 PAPOLGQ9BWT3 736 aaKnown RBP4.33□□□□□ -1.72
ATPAF1-203ENST00000460928 ELOVL6Q9H5J4 265 aa4.33□□□□□ -1.72
ATPAF1-203ENST00000460928 PRORYQ9H606 182 aa4.33□□□□□ -1.72
ATPAF1-203ENST00000460928 OPA3Q9H6K4 179 aa4.33□□□□□ -1.72
ATPAF1-203ENST00000460928 WDR55Q9H6Y2 383 aaPredicted RBP4.33□□□□□ -1.72
ATPAF1-203ENST00000460928 NT5DC2Q9H857 520 aa4.33□□□□□ -1.72
ATPAF1-203ENST00000460928 MYOZ1Q9NP98 299 aaPredicted RBP4.33□□□□□ -1.72
ATPAF1-203ENST00000460928 NRIP3Q9NQ35 241 aa4.33□□□□□ -1.72
ATPAF1-203ENST00000460928 EQTNQ9NQ60 294 aa4.33□□□□□ -1.72
ATPAF1-203ENST00000460928 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.33□□□□□ -1.72
ATPAF1-203ENST00000460928 GSN-AS1Q9NRJ2 163 aa4.33□□□□□ -1.72
ATPAF1-203ENST00000460928 ZNF275Q9NSD4 429 aaPredicted RBP4.33□□□□□ -1.72
ATPAF1-203ENST00000460928 MCUBQ9NWR8 336 aa4.33□□□□□ -1.72
ATPAF1-203ENST00000460928 THUMPD1Q9NXG2 353 aaKnown RBP4.33□□□□□ -1.72
ATPAF1-203ENST00000460928 PLEKHB1Q9UF11 243 aaPredicted RBP4.33□□□□□ -1.72
ATPAF1-203ENST00000460928 CDC14AQ9UNH5 594 aa4.33□□□□□ -1.72
ATPAF1-203ENST00000460928 SNX6Q9UNH7 406 aa4.33□□□□□ -1.72
ATPAF1-203ENST00000460928 BAIAP2Q9UQB8 552 aa4.33□□□□□ -1.72
ATPAF1-203ENST00000460928 LAMP3Q9UQV4 416 aa4.33□□□□□ -1.72
ATPAF1-203ENST00000460928 FARSAQ9Y285 508 aaKnown RBP4.33□□□□□ -1.72
ATPAF1-203ENST00000460928 DLGAP4Q9Y2H0 992 aa4.33□□□□□ -1.72
ATPAF1-203ENST00000460928 ATG4BQ9Y4P1 393 aa4.33□□□□□ -1.72
ATPAF1-203ENST00000460928 CCL27Q9Y4X3 112 aa4.33□□□□□ -1.72
ATPAF1-203ENST00000460928 POLR3HQ9Y535 204 aaPredicted RBP4.33□□□□□ -1.72
ATPAF1-203ENST00000460928 DNAJC15Q9Y5T4 150 aa4.33□□□□□ -1.72
ATPAF1-203ENST00000460928 BOD1L1Q8NFC6 3051 aa4.33□□□□□ -1.72
ATPAF1-203ENST00000460928 CELSR1Q9NYQ6 3014 aa4.33□□□□□ -1.72
ATPAF1-203ENST00000460928 SVILO95425 2214 aa4.33□□□□□ -1.72
ATPAF1-203ENST00000460928 NUP210LQ5VU65 1888 aa4.32□□□□□ -1.72
ATPAF1-203ENST00000460928 F8P00451 2351 aa4.32□□□□□ -1.72
ATPAF1-203ENST00000460928 TRBV5-7A0A0A0MS05 114 aa4.32□□□□□ -1.72
ATPAF1-203ENST00000460928 A0A0A6YYD5 115 aa4.32□□□□□ -1.72
ATPAF1-203ENST00000460928 PNMA8CA0A1B0GUJ8 204 aa4.32□□□□□ -1.72
ATPAF1-203ENST00000460928 PRSS51A0A1B0GVH4 220 aa4.32□□□□□ -1.72
ATPAF1-203ENST00000460928 MFSD2BA6NFX1 497 aa4.32□□□□□ -1.72
ATPAF1-203ENST00000460928 VSTM2BA6NLU5 285 aa4.32□□□□□ -1.72
ATPAF1-203ENST00000460928 HSPB2A8KAH6 182 aa4.32□□□□□ -1.72
ATPAF1-203ENST00000460928 IDSB3KWA1 339 aa4.32□□□□□ -1.72
ATPAF1-203ENST00000460928 C9J4A7 227 aa4.32□□□□□ -1.72
ATPAF1-203ENST00000460928 SOCS6O14544 535 aa4.32□□□□□ -1.72
ATPAF1-203ENST00000460928 TO15178 435 aa4.32□□□□□ -1.72
ATPAF1-203ENST00000460928 NUPL2O15504 423 aaKnown RBP4.32□□□□□ -1.72
ATPAF1-203ENST00000460928 HCRTR2O43614 444 aa4.32□□□□□ -1.72
ATPAF1-203ENST00000460928 NDUFS6O75380 124 aaKnown RBP4.32□□□□□ -1.72
ATPAF1-203ENST00000460928 CREG1O75629 220 aa4.32□□□□□ -1.72
ATPAF1-203ENST00000460928 CBR3O75828 277 aa4.32□□□□□ -1.72
ATPAF1-203ENST00000460928 KCNK2O95069 426 aa4.32□□□□□ -1.72
ATPAF1-203ENST00000460928 NSA2O95478 260 aaKnown RBP4.32□□□□□ -1.72
ATPAF1-203ENST00000460928 AIFM1O95831 613 aa4.32□□□□□ -1.72
ATPAF1-203ENST00000460928 F10P00742 488 aa4.32□□□□□ -1.72
ATPAF1-203ENST00000460928 IGHV2-70P01814 119 aa4.32□□□□□ -1.72
ATPAF1-203ENST00000460928 C1QCP02747 245 aa4.32□□□□□ -1.72
ATPAF1-203ENST00000460928 IGKV2-30P06310 120 aa4.32□□□□□ -1.72
ATPAF1-203ENST00000460928 KLK3P07288 261 aaPredicted RBP4.32□□□□□ -1.72
ATPAF1-203ENST00000460928 QDPRP09417 244 aa4.32□□□□□ -1.72
ATPAF1-203ENST00000460928 SBK2P0C263 348 aa4.32□□□□□ -1.72
ATPAF1-203ENST00000460928 RRASP10301 218 aa4.32□□□□□ -1.72
ATPAF1-203ENST00000460928 ZNF182P17025 639 aaPredicted RBP4.32□□□□□ -1.72
ATPAF1-203ENST00000460928 ZNF26P17031 533 aaPredicted RBP4.32□□□□□ -1.72
ATPAF1-203ENST00000460928 TNNI3P19429 210 aa4.32□□□□□ -1.72
ATPAF1-203ENST00000460928 HIST1H1TP22492 207 aaPredicted RBP4.32□□□□□ -1.72
ATPAF1-203ENST00000460928 HRH2P25021 359 aa4.32□□□□□ -1.72
ATPAF1-203ENST00000460928 HLA-DMAP28067 261 aa4.32□□□□□ -1.72
ATPAF1-203ENST00000460928 BMI1P35226 326 aa4.32□□□□□ -1.72
ATPAF1-203ENST00000460928 CAPZA1P52907 286 aa4.32□□□□□ -1.72
ATPAF1-203ENST00000460928 EMP2P54851 167 aa4.32□□□□□ -1.72
ATPAF1-203ENST00000460928 LIM2P55344 173 aa4.32□□□□□ -1.72
ATPAF1-203ENST00000460928 PKNOX1P55347 436 aa4.32□□□□□ -1.72
ATPAF1-203ENST00000460928 OR2B6P58173 313 aa4.32□□□□□ -1.72
ATPAF1-203ENST00000460928 GABARAPL2P60520 117 aa4.32□□□□□ -1.72
ATPAF1-203ENST00000460928 HSF1Q00613 529 aa4.32□□□□□ -1.72
ATPAF1-203ENST00000460928 GLO1Q04760 184 aa4.32□□□□□ -1.72
ATPAF1-203ENST00000460928 PUDPQ08623 228 aa4.32□□□□□ -1.72
ATPAF1-203ENST00000460928 Q0VFX4 171 aa4.32□□□□□ -1.72
ATPAF1-203ENST00000460928 SLAMF1Q13291 335 aa4.32□□□□□ -1.72
ATPAF1-203ENST00000460928 KLF9Q13886 244 aaPredicted RBP4.32□□□□□ -1.72
ATPAF1-203ENST00000460928 HNF4GQ14541 408 aa4.32□□□□□ -1.72
ATPAF1-203ENST00000460928 GRK1Q15835 563 aa4.32□□□□□ -1.72
ATPAF1-203ENST00000460928 HSPB2Q16082 182 aa4.32□□□□□ -1.72
ATPAF1-203ENST00000460928 GGTA1PQ4G0N0 100 aa4.32□□□□□ -1.72
ATPAF1-203ENST00000460928 FAM98BQ52LJ0 330 aaKnown RBP4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms