RNA–Protein interactions for RNA: ENST00000460265.5

LMNB1-203, Transcript of lamin B1, humanhuman

TSL 1 (best)

Gene LMNB1, Length 3,475 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-203ENST00000460265 LANCL3Q6ZV70 420 aa14.01□□□□□ -0.17
LMNB1-203ENST00000460265 COMMD2Q86X83 199 aa14.01□□□□□ -0.17
LMNB1-203ENST00000460265 ZNF687Q8N1G0 1237 aa14.01□□□□□ -0.17
LMNB1-203ENST00000460265 SLC2A12Q8TD20 617 aa14.01□□□□□ -0.17
LMNB1-203ENST00000460265 LCORQ96JN0 433 aaPredicted RBP14.01□□□□□ -0.17
LMNB1-203ENST00000460265 TSNAXQ99598 290 aaKnown RBP14.01□□□□□ -0.17
LMNB1-203ENST00000460265 TSPAN10Q9H1Z9 355 aaPredicted RBP14.01□□□□□ -0.17
LMNB1-203ENST00000460265 NOX4Q9NPH5 578 aa14.01□□□□□ -0.17
LMNB1-203ENST00000460265 MBTPS2O43462 519 aa14.01□□□□□ -0.17
LMNB1-203ENST00000460265 FZD7O75084 574 aa14.01□□□□□ -0.17
LMNB1-203ENST00000460265 MT-ND4P03905 459 aa14.01□□□□□ -0.17
LMNB1-203ENST00000460265 EIF4EP06730 217 aaKnown RBP14.01□□□□□ -0.17
LMNB1-203ENST00000460265 CXCL2P19875 107 aa14.01□□□□□ -0.17
LMNB1-203ENST00000460265 FGF9P31371 208 aaPredicted RBP14.01□□□□□ -0.17
LMNB1-203ENST00000460265 ELP2Q6IA86 826 aa14.01□□□□□ -0.17
LMNB1-203ENST00000460265 C3orf49Q96BT1 292 aa14.01□□□□□ -0.17
LMNB1-203ENST00000460265 KTI12Q96EK9 354 aaPredicted RBP14.01□□□□□ -0.17
LMNB1-203ENST00000460265 NUDT22Q9BRQ3 303 aa14.01□□□□□ -0.17
LMNB1-203ENST00000460265 CRB3Q9BUF7 120 aa14.01□□□□□ -0.17
LMNB1-203ENST00000460265 OR11A1Q9GZK7 315 aa14.01□□□□□ -0.17
LMNB1-203ENST00000460265 RNF32Q9H0A6 362 aa14.01□□□□□ -0.17
LMNB1-203ENST00000460265 SLC22A11Q9NSA0 550 aa14.01□□□□□ -0.17
LMNB1-203ENST00000460265 SPI1P17947 270 aa14□□□□□ -0.17
LMNB1-203ENST00000460265 PRPS1P60891 318 aa14□□□□□ -0.17
LMNB1-203ENST00000460265 SNTB2Q13425 540 aaKnown RBP14□□□□□ -0.17
LMNB1-203ENST00000460265 PRTGQ2VWP7 1150 aa14□□□□□ -0.17
LMNB1-203ENST00000460265 VASNQ6EMK4 673 aa14□□□□□ -0.17
LMNB1-203ENST00000460265 PTCRAQ6ISU1 281 aaPredicted RBP14□□□□□ -0.17
LMNB1-203ENST00000460265 HSD17B13Q7Z5P4 300 aaPredicted RBP14□□□□□ -0.17
LMNB1-203ENST00000460265 FGD2Q7Z6J4 655 aa14□□□□□ -0.17
LMNB1-203ENST00000460265 SIAH3Q8IW03 269 aa14□□□□□ -0.17
LMNB1-203ENST00000460265 BOLLQ8N9W6 283 aaKnown RBP14□□□□□ -0.17
LMNB1-203ENST00000460265 CMSS1Q9BQ75 279 aaKnown RBP14□□□□□ -0.17
LMNB1-203ENST00000460265 EXOGQ9Y2C4 368 aaKnown RBP14□□□□□ -0.17
LMNB1-203ENST00000460265 EFCAB7A8K855 629 aa14□□□□□ -0.17
LMNB1-203ENST00000460265 BCKDHBP21953 392 aa14□□□□□ -0.17
LMNB1-203ENST00000460265 KCNJ3P48549 501 aa14□□□□□ -0.17
LMNB1-203ENST00000460265 TOMM34Q15785 309 aaPredicted RBP14□□□□□ -0.17
LMNB1-203ENST00000460265 HBMQ6B0K9 141 aa14□□□□□ -0.17
LMNB1-203ENST00000460265 LRRN1Q6UXK5 716 aa14□□□□□ -0.17
LMNB1-203ENST00000460265 TMPRSS12Q86WS5 348 aa14□□□□□ -0.17
LMNB1-203ENST00000460265 NKD1Q969G9 470 aa14□□□□□ -0.17
LMNB1-203ENST00000460265 CTHRC1Q96CG8 243 aa14□□□□□ -0.17
LMNB1-203ENST00000460265 KLRF1Q9NZS2 232 aa14□□□□□ -0.17
LMNB1-203ENST00000460265 NCDNQ9UBB6 729 aa14□□□□□ -0.17
LMNB1-203ENST00000460265 TRBV23-1A0A0A0MS06 115 aa14□□□□□ -0.17
LMNB1-203ENST00000460265 ZNF879B4DU55 563 aa14□□□□□ -0.17
LMNB1-203ENST00000460265 SPDEFO95238 335 aa14□□□□□ -0.17
LMNB1-203ENST00000460265 TACSTD2P09758 323 aa14□□□□□ -0.17
LMNB1-203ENST00000460265 GPR3P46089 330 aa14□□□□□ -0.17
LMNB1-203ENST00000460265 ACTA2P62736 377 aa14□□□□□ -0.17
LMNB1-203ENST00000460265 ACTG2P63267 376 aa14□□□□□ -0.17
LMNB1-203ENST00000460265 POU4F2Q12837 409 aa14□□□□□ -0.17
LMNB1-203ENST00000460265 A0A087WUJ7 227 aa13.99□□□□□ -0.17
LMNB1-203ENST00000460265 FXYD6-FXYD2A0A087WZ82 144 aa13.99□□□□□ -0.17
LMNB1-203ENST00000460265 LMO7DNF2Z398 122 aa13.99□□□□□ -0.17
LMNB1-203ENST00000460265 HEXBP07686 556 aa13.99□□□□□ -0.17
LMNB1-203ENST00000460265 OR2T7P0C7T2 308 aa13.99□□□□□ -0.17
LMNB1-203ENST00000460265 GAS1P54826 345 aa13.99□□□□□ -0.17
LMNB1-203ENST00000460265 ZNF85Q03923 595 aa13.99□□□□□ -0.17
LMNB1-203ENST00000460265 DNAAF1Q8NEP3 725 aa13.99□□□□□ -0.17
LMNB1-203ENST00000460265 OR1M1Q8NGA1 313 aa13.99□□□□□ -0.17
LMNB1-203ENST00000460265 OR2T27Q8NH04 317 aa13.99□□□□□ -0.17
LMNB1-203ENST00000460265 MRPS24Q96EL2 167 aaKnown RBP13.99□□□□□ -0.17
LMNB1-203ENST00000460265 PELI1Q96FA3 418 aa13.99□□□□□ -0.17
LMNB1-203ENST00000460265 DERL3Q96Q80 235 aa13.99□□□□□ -0.17
LMNB1-203ENST00000460265 ORAI3Q9BRQ5 295 aa13.99□□□□□ -0.17
LMNB1-203ENST00000460265 FXYD6Q9H0Q3 95 aa13.99□□□□□ -0.17
LMNB1-203ENST00000460265 GSN-AS1Q9NRJ2 163 aa13.99□□□□□ -0.17
LMNB1-203ENST00000460265 NTMQ9P121 344 aa13.99□□□□□ -0.17
LMNB1-203ENST00000460265 TINAGQ9UJW2 476 aa13.99□□□□□ -0.17
LMNB1-203ENST00000460265 PCDH15Q96QU1 1955 aa13.99□□□□□ -0.17
LMNB1-203ENST00000460265 VPS13AQ96RL7 3174 aa13.99□□□□□ -0.17
LMNB1-203ENST00000460265 SLC16A7O60669 478 aa13.99□□□□□ -0.17
LMNB1-203ENST00000460265 S1PR1P21453 382 aa13.99□□□□□ -0.17
LMNB1-203ENST00000460265 NRG3P56975 720 aa13.99□□□□□ -0.17
LMNB1-203ENST00000460265 PSMA6P60900 246 aaKnown RBP13.99□□□□□ -0.17
LMNB1-203ENST00000460265 EFNB1P98172 346 aa13.99□□□□□ -0.17
LMNB1-203ENST00000460265 RELL2Q8NC24 303 aaPredicted RBP13.99□□□□□ -0.17
LMNB1-203ENST00000460265 SFT2D1Q8WV19 159 aa13.99□□□□□ -0.17
LMNB1-203ENST00000460265 NUDT9Q9BW91 350 aa13.99□□□□□ -0.17
LMNB1-203ENST00000460265 MED9Q9NWA0 146 aa13.99□□□□□ -0.17
LMNB1-203ENST00000460265 MED11Q9P086 117 aa13.99□□□□□ -0.17
LMNB1-203ENST00000460265 TTC28Q96AY4 2481 aa13.99□□□□□ -0.17
LMNB1-203ENST00000460265 KLF4O43474 513 aa13.99□□□□□ -0.17
LMNB1-203ENST00000460265 IGHA1P01876 353 aa13.99□□□□□ -0.17
LMNB1-203ENST00000460265 PTHLHP12272 177 aa13.99□□□□□ -0.17
LMNB1-203ENST00000460265 CBR1P16152 277 aa13.99□□□□□ -0.17
LMNB1-203ENST00000460265 S100A11P31949 105 aa13.99□□□□□ -0.17
LMNB1-203ENST00000460265 CDKN2AP42771 156 aaKnown RBP13.99□□□□□ -0.17
LMNB1-203ENST00000460265 CXCL12P48061 93 aa13.99□□□□□ -0.17
LMNB1-203ENST00000460265 MELKQ14680 651 aa13.99□□□□□ -0.17
LMNB1-203ENST00000460265 LPAL2Q16609 132 aa13.99□□□□□ -0.17
LMNB1-203ENST00000460265 FAM69BQ5VUD6 431 aa13.99□□□□□ -0.17
LMNB1-203ENST00000460265 APOOLQ6UXV4 268 aa13.99□□□□□ -0.17
LMNB1-203ENST00000460265 DPY19L2P2Q6ZN68 376 aa13.99□□□□□ -0.17
LMNB1-203ENST00000460265 FCRLAQ7L513 359 aa13.99□□□□□ -0.17
LMNB1-203ENST00000460265 SLITRK4Q8IW52 837 aa13.99□□□□□ -0.17
LMNB1-203ENST00000460265 OR4D9Q8NGE8 314 aa13.99□□□□□ -0.17
LMNB1-203ENST00000460265 OR1L3Q8NH93 324 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 620.2 ms