RNA–Protein interactions for RNA: ENST00000460168.1

HERC4-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 2,215 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-207ENST00000460168 ZFAND5O76080 213 aa9.41□□□□□ -0.9
HERC4-207ENST00000460168 IGFBP1P08833 259 aaPredicted RBP9.41□□□□□ -0.9
HERC4-207ENST00000460168 FMO3P31513 532 aa9.41□□□□□ -0.9
HERC4-207ENST00000460168 CDKN1BP46527 198 aa9.41□□□□□ -0.9
HERC4-207ENST00000460168 TSPAN31Q12999 210 aa9.41□□□□□ -0.9
HERC4-207ENST00000460168 SLC35D3Q5M8T2 416 aa9.41□□□□□ -0.9
HERC4-207ENST00000460168 FNDC7Q5VTL7 733 aa9.41□□□□□ -0.9
HERC4-207ENST00000460168 RPUSD3Q6P087 351 aaKnown RBP9.41□□□□□ -0.9
HERC4-207ENST00000460168 ULK3Q6PHR2 472 aa9.41□□□□□ -0.9
HERC4-207ENST00000460168 CBLN3Q6UW01 205 aa9.41□□□□□ -0.9
HERC4-207ENST00000460168 WDR88Q6ZMY6 472 aa9.41□□□□□ -0.9
HERC4-207ENST00000460168 C17orf107Q6ZR85 190 aa9.41□□□□□ -0.9
HERC4-207ENST00000460168 FAM71CQ8NEG0 241 aa9.41□□□□□ -0.9
HERC4-207ENST00000460168 WDR36Q8NI36 951 aaKnown RBP9.41□□□□□ -0.9
HERC4-207ENST00000460168 SETD6Q8TBK2 473 aa9.41□□□□□ -0.9
HERC4-207ENST00000460168 FBLIM1Q8WUP2 373 aa9.41□□□□□ -0.9
HERC4-207ENST00000460168 WFDC12Q8WWY7 111 aa9.41□□□□□ -0.9
HERC4-207ENST00000460168 KCNS3Q9BQ31 491 aa9.41□□□□□ -0.9
HERC4-207ENST00000460168 DEFB126Q9BYW3 111 aa9.41□□□□□ -0.9
HERC4-207ENST00000460168 TOLLIPQ9H0E2 274 aa9.41□□□□□ -0.9
HERC4-207ENST00000460168 MED17Q9NVC6 651 aa9.41□□□□□ -0.9
HERC4-207ENST00000460168 RDH8Q9NYR8 311 aa9.41□□□□□ -0.9
HERC4-207ENST00000460168 KIF25Q9UIL4 384 aa9.41□□□□□ -0.9
HERC4-207ENST00000460168 GPR160Q9UJ42 338 aa9.41□□□□□ -0.9
HERC4-207ENST00000460168 RNF6Q9Y252 685 aa9.41□□□□□ -0.9
HERC4-207ENST00000460168 GOLT1BQ9Y3E0 138 aa9.41□□□□□ -0.9
HERC4-207ENST00000460168 HSPB11Q9Y547 144 aa9.41□□□□□ -0.9
HERC4-207ENST00000460168 LOC102723996A0A087X1L8 192 aa9.4□□□□□ -0.9
HERC4-207ENST00000460168 IGHV1-45A0A0A0MS14 117 aa9.4□□□□□ -0.9
HERC4-207ENST00000460168 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9.4□□□□□ -0.9
HERC4-207ENST00000460168 A8MXK9 166 aa9.4□□□□□ -0.9
HERC4-207ENST00000460168 PTGES3LE9PB15 166 aa9.4□□□□□ -0.9
HERC4-207ENST00000460168 XPNPEP2O43895 674 aa9.4□□□□□ -0.9
HERC4-207ENST00000460168 PAX6P26367 422 aa9.4□□□□□ -0.9
HERC4-207ENST00000460168 NBL1P41271 181 aa9.4□□□□□ -0.9
HERC4-207ENST00000460168 SKP2Q13309 424 aa9.4□□□□□ -0.9
HERC4-207ENST00000460168 PCOLCEQ15113 449 aa9.4□□□□□ -0.9
HERC4-207ENST00000460168 KIRREL2Q6UWL6 708 aa9.4□□□□□ -0.9
HERC4-207ENST00000460168 CASP12Q6UXS9 341 aa9.4□□□□□ -0.9
HERC4-207ENST00000460168 TIPARPQ7Z3E1 657 aaKnown RBP9.4□□□□□ -0.9
HERC4-207ENST00000460168 STX19Q8N4C7 294 aa9.4□□□□□ -0.9
HERC4-207ENST00000460168 LRRC17Q8N6Y2 441 aa9.4□□□□□ -0.9
HERC4-207ENST00000460168 OR10A7Q8NGE5 316 aa9.4□□□□□ -0.9
HERC4-207ENST00000460168 FOXRED1Q96CU9 486 aaPredicted RBP9.4□□□□□ -0.9
HERC4-207ENST00000460168 BOD1Q96IK1 185 aa9.4□□□□□ -0.9
HERC4-207ENST00000460168 FOXJ2Q9P0K8 574 aa9.4□□□□□ -0.9
HERC4-207ENST00000460168 TCFL5Q9UL49 500 aa9.4□□□□□ -0.9
HERC4-207ENST00000460168 WASF3Q9UPY6 502 aa9.4□□□□□ -0.9
HERC4-207ENST00000460168 MED31Q9Y3C7 131 aa9.4□□□□□ -0.9
HERC4-207ENST00000460168 HS3ST3B1Q9Y662 390 aa9.4□□□□□ -0.9
HERC4-207ENST00000460168 DMXL1Q9Y485 3027 aa9.4□□□□□ -0.9
HERC4-207ENST00000460168 HEATR5AQ86XA9 2040 aa9.4□□□□□ -0.9
HERC4-207ENST00000460168 A0A1W2PNU3 283 aaPredicted RBP9.4□□□□□ -0.91
HERC4-207ENST00000460168 ALG1L2C9J202 215 aa9.4□□□□□ -0.91
HERC4-207ENST00000460168 M0R129 80 aa9.4□□□□□ -0.91
HERC4-207ENST00000460168 GMFGO60234 142 aa9.4□□□□□ -0.91
HERC4-207ENST00000460168 GPRIN2O60269 458 aa9.4□□□□□ -0.91
HERC4-207ENST00000460168 NUDT14O95848 222 aa9.4□□□□□ -0.91
HERC4-207ENST00000460168 IFNA7P01567 189 aa9.4□□□□□ -0.91
HERC4-207ENST00000460168 COX6A1P12074 109 aa9.4□□□□□ -0.91
HERC4-207ENST00000460168 RPS18P62269 152 aaKnown RBP9.4□□□□□ -0.91
HERC4-207ENST00000460168 VAMP2P63027 116 aa9.4□□□□□ -0.91
HERC4-207ENST00000460168 MRPS11P82912 194 aaKnown RBP9.4□□□□□ -0.91
HERC4-207ENST00000460168 CAMK2DQ13557 499 aa9.4□□□□□ -0.91
HERC4-207ENST00000460168 POU4F3Q15319 338 aa9.4□□□□□ -0.91
HERC4-207ENST00000460168 FAM189A2Q15884 450 aa9.4□□□□□ -0.91
HERC4-207ENST00000460168 SMN1Q16637 294 aaKnown RBP9.4□□□□□ -0.91
HERC4-207ENST00000460168 CHRFAM7AQ494W8 412 aa9.4□□□□□ -0.91
HERC4-207ENST00000460168 LAIR2Q6ISS4 152 aa9.4□□□□□ -0.91
HERC4-207ENST00000460168 ZNF773Q6PK81 442 aa9.4□□□□□ -0.91
HERC4-207ENST00000460168 RBMS3Q6XE24 437 aaKnown RBP9.4□□□□□ -0.91
HERC4-207ENST00000460168 CXXC5Q7LFL8 322 aaKnown RBP9.4□□□□□ -0.91
HERC4-207ENST00000460168 MARCH3Q86UD3 253 aa9.4□□□□□ -0.91
HERC4-207ENST00000460168 LSRQ86X29 649 aaPredicted RBP9.4□□□□□ -0.91
HERC4-207ENST00000460168 CDK20Q8IZL9 346 aa9.4□□□□□ -0.91
HERC4-207ENST00000460168 POGLUT1Q8NBL1 392 aa9.4□□□□□ -0.91
HERC4-207ENST00000460168 PFN4Q8NHR9 129 aa9.4□□□□□ -0.91
HERC4-207ENST00000460168 CT55Q8WUE5 264 aa9.4□□□□□ -0.91
HERC4-207ENST00000460168 SFXN2Q96NB2 322 aa9.4□□□□□ -0.91
HERC4-207ENST00000460168 DPH1Q9BZG8 443 aa9.4□□□□□ -0.91
HERC4-207ENST00000460168 CCDC90BQ9GZT6 254 aa9.4□□□□□ -0.91
HERC4-207ENST00000460168 EGLN3Q9H6Z9 239 aa9.4□□□□□ -0.91
HERC4-207ENST00000460168 EXOSC3Q9NQT5 275 aaKnown RBP9.4□□□□□ -0.91
HERC4-207ENST00000460168 SCN3BQ9NY72 215 aa9.4□□□□□ -0.91
HERC4-207ENST00000460168 MYOTQ9UBF9 498 aa9.4□□□□□ -0.91
HERC4-207ENST00000460168 MUC6Q6W4X9 2439 aa9.39□□□□□ -0.91
HERC4-207ENST00000460168 NSG1A0A0A6YYJ2 146 aa9.39□□□□□ -0.91
HERC4-207ENST00000460168 A0A1W2PQD3 144 aa9.39□□□□□ -0.91
HERC4-207ENST00000460168 BTBD17A6NE02 478 aa9.39□□□□□ -0.91
HERC4-207ENST00000460168 TMEM200CA6NKL6 621 aa9.39□□□□□ -0.91
HERC4-207ENST00000460168 CTAG2O75638 210 aa9.39□□□□□ -0.91
HERC4-207ENST00000460168 OR2J2O76002 312 aa9.39□□□□□ -0.91
HERC4-207ENST00000460168 LYPD3O95274 346 aa9.39□□□□□ -0.91
HERC4-207ENST00000460168 IGHEP01854 428 aa9.39□□□□□ -0.91
HERC4-207ENST00000460168 NGFRP08138 427 aa9.39□□□□□ -0.91
HERC4-207ENST00000460168 HLA-DMAP28067 261 aa9.39□□□□□ -0.91
HERC4-207ENST00000460168 FBXW4P57775 412 aa9.39□□□□□ -0.91
HERC4-207ENST00000460168 CXCR4P61073 352 aa9.39□□□□□ -0.91
HERC4-207ENST00000460168 SNRPD2P62316 118 aaKnown RBP9.39□□□□□ -0.91
HERC4-207ENST00000460168 RPS15P62841 145 aaKnown RBP9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms