RNA–Protein interactions for RNA: ENST00000460064.1

CCDC50-203, Transcript of coiled-coil domain containing 50, humanhuman

TSL 2

Gene CCDC50, Length 420 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-203ENST00000460064 ACMSDQ8TDX5 336 aa3.68□□□□□ -1.82
CCDC50-203ENST00000460064 ELMO1Q92556 727 aa3.68□□□□□ -1.82
CCDC50-203ENST00000460064 PEX13Q92968 403 aa3.68□□□□□ -1.82
CCDC50-203ENST00000460064 ZNF578Q96N58 590 aaPredicted RBP3.68□□□□□ -1.82
CCDC50-203ENST00000460064 CWH43Q9H720 699 aa3.68□□□□□ -1.82
CCDC50-203ENST00000460064 ANKRA2Q9H9E1 313 aa3.68□□□□□ -1.82
CCDC50-203ENST00000460064 SAMSN1Q9NSI8 373 aaKnown RBP3.68□□□□□ -1.82
CCDC50-203ENST00000460064 ANAPC11Q9NYG5 84 aa3.68□□□□□ -1.82
CCDC50-203ENST00000460064 PCYOX1Q9UHG3 505 aa3.68□□□□□ -1.82
CCDC50-203ENST00000460064 MAP3K19Q56UN5 1328 aa3.68□□□□□ -1.82
CCDC50-203ENST00000460064 GTF3C1Q12789 2109 aa3.67□□□□□ -1.82
CCDC50-203ENST00000460064 A0A075B6Q4 140 aa3.67□□□□□ -1.82
CCDC50-203ENST00000460064 A0A1B0GVI7 797 aa3.67□□□□□ -1.82
CCDC50-203ENST00000460064 PINLYPA6NC86 204 aa3.67□□□□□ -1.82
CCDC50-203ENST00000460064 ZNF726A6NNF4 738 aa3.67□□□□□ -1.82
CCDC50-203ENST00000460064 XKRYO14609 159 aa3.67□□□□□ -1.82
CCDC50-203ENST00000460064 DNALI1O14645 258 aaPredicted RBP3.67□□□□□ -1.82
CCDC50-203ENST00000460064 RAB29O14966 203 aa3.67□□□□□ -1.82
CCDC50-203ENST00000460064 CTAG2O75638 210 aa3.67□□□□□ -1.82
CCDC50-203ENST00000460064 OR2J3O76001 311 aa3.67□□□□□ -1.82
CCDC50-203ENST00000460064 YEATS4O95619 227 aa3.67□□□□□ -1.82
CCDC50-203ENST00000460064 KRT6AP02538 564 aa3.67□□□□□ -1.82
CCDC50-203ENST00000460064 ANXA8P13928 327 aa3.67□□□□□ -1.82
CCDC50-203ENST00000460064 CNR1P21554 472 aa3.67□□□□□ -1.82
CCDC50-203ENST00000460064 NAA10P41227 235 aaPredicted RBP3.67□□□□□ -1.82
CCDC50-203ENST00000460064 RPS10P46783 165 aaKnown RBP3.67□□□□□ -1.82
CCDC50-203ENST00000460064 LHX2P50458 406 aa3.67□□□□□ -1.82
CCDC50-203ENST00000460064 CCR8P51685 355 aa3.67□□□□□ -1.82
CCDC50-203ENST00000460064 RGS8P57771 180 aaPredicted RBP3.67□□□□□ -1.82
CCDC50-203ENST00000460064 RPS21P63220 83 aaKnown RBP3.67□□□□□ -1.82
CCDC50-203ENST00000460064 ZNF92Q03936 586 aa3.67□□□□□ -1.82
CCDC50-203ENST00000460064 MPPED2Q15777 294 aa3.67□□□□□ -1.82
CCDC50-203ENST00000460064 MRPL23Q16540 153 aaKnown RBP3.67□□□□□ -1.82
CCDC50-203ENST00000460064 SGCAQ16586 387 aa3.67□□□□□ -1.82
CCDC50-203ENST00000460064 GUCA2BQ16661 112 aa3.67□□□□□ -1.82
CCDC50-203ENST00000460064 COA6Q5JTJ3 125 aaKnown RBP3.67□□□□□ -1.82
CCDC50-203ENST00000460064 ANXA8L1Q5VT79 327 aa3.67□□□□□ -1.82
CCDC50-203ENST00000460064 PEX26Q7Z412 305 aa3.67□□□□□ -1.82
CCDC50-203ENST00000460064 C6orf120Q7Z4R8 191 aa3.67□□□□□ -1.82
CCDC50-203ENST00000460064 MKXQ8IYA7 352 aa3.67□□□□□ -1.82
CCDC50-203ENST00000460064 GTPBP8Q8N3Z3 284 aaPredicted RBP3.67□□□□□ -1.82
CCDC50-203ENST00000460064 FAM184AQ8NB25 1140 aa3.67□□□□□ -1.82
CCDC50-203ENST00000460064 OR8K3Q8NH51 312 aa3.67□□□□□ -1.82
CCDC50-203ENST00000460064 SLC38A4Q969I6 547 aa3.67□□□□□ -1.82
CCDC50-203ENST00000460064 TMEM54Q969K7 222 aa3.67□□□□□ -1.82
CCDC50-203ENST00000460064 TMIGD2Q96BF3 282 aa3.67□□□□□ -1.82
CCDC50-203ENST00000460064 ATP6V1G3Q96LB4 118 aa3.67□□□□□ -1.82
CCDC50-203ENST00000460064 CHP1Q99653 195 aa3.67□□□□□ -1.82
CCDC50-203ENST00000460064 SH3GL3Q99963 347 aa3.67□□□□□ -1.82
CCDC50-203ENST00000460064 HDHD3Q9BSH5 251 aaPredicted RBP3.67□□□□□ -1.82
CCDC50-203ENST00000460064 OSBPL10Q9BXB5 764 aa3.67□□□□□ -1.82
CCDC50-203ENST00000460064 GABARAPL3Q9BY60 117 aa3.67□□□□□ -1.82
CCDC50-203ENST00000460064 FGF20Q9NP95 211 aaPredicted RBP3.67□□□□□ -1.82
CCDC50-203ENST00000460064 GNPTGQ9UJJ9 305 aa3.67□□□□□ -1.82
CCDC50-203ENST00000460064 LSM7Q9UK45 103 aaKnown RBP3.67□□□□□ -1.82
CCDC50-203ENST00000460064 PHLPP2Q6ZVD8 1323 aa3.67□□□□□ -1.82
CCDC50-203ENST00000460064 CNTNAP1P78357 1384 aa3.66□□□□□ -1.82
CCDC50-203ENST00000460064 OR2AG2A6NM03 316 aa3.66□□□□□ -1.82
CCDC50-203ENST00000460064 FAM166BA8MTA8 275 aa3.66□□□□□ -1.82
CCDC50-203ENST00000460064 TCP11X1B4DZS4 312 aa3.66□□□□□ -1.82
CCDC50-203ENST00000460064 F8VZ95 297 aa3.66□□□□□ -1.82
CCDC50-203ENST00000460064 LAD1O00515 517 aa3.66□□□□□ -1.82
CCDC50-203ENST00000460064 PEX7O00628 323 aa3.66□□□□□ -1.82
CCDC50-203ENST00000460064 NSG1P42857 185 aa3.66□□□□□ -1.82
CCDC50-203ENST00000460064 SYKP43405 635 aa3.66□□□□□ -1.82
CCDC50-203ENST00000460064 CDKN1BP46527 198 aa3.66□□□□□ -1.82
CCDC50-203ENST00000460064 NMUP48645 174 aa3.66□□□□□ -1.82
CCDC50-203ENST00000460064 TMED10P49755 219 aaKnown RBP3.66□□□□□ -1.82
CCDC50-203ENST00000460064 FGF8P55075 233 aaPredicted RBP3.66□□□□□ -1.82
CCDC50-203ENST00000460064 C21orf59P57076 290 aa3.66□□□□□ -1.82
CCDC50-203ENST00000460064 EIF3EP60228 445 aaKnown RBP3.66□□□□□ -1.82
CCDC50-203ENST00000460064 ACTA2P62736 377 aa3.66□□□□□ -1.82
CCDC50-203ENST00000460064 ACTG2P63267 376 aa3.66□□□□□ -1.82
CCDC50-203ENST00000460064 ACTC1P68032 377 aa3.66□□□□□ -1.82
CCDC50-203ENST00000460064 ACTA1P68133 377 aa3.66□□□□□ -1.82
CCDC50-203ENST00000460064 SMARCB1Q12824 385 aa3.66□□□□□ -1.82
CCDC50-203ENST00000460064 PSG5Q15238 335 aa3.66□□□□□ -1.82
CCDC50-203ENST00000460064 ZNF429Q86V71 674 aa3.66□□□□□ -1.82
CCDC50-203ENST00000460064 SLC34A3Q8N130 599 aa3.66□□□□□ -1.82
CCDC50-203ENST00000460064 PDIK1LQ8N165 341 aa3.66□□□□□ -1.82
CCDC50-203ENST00000460064 BLOC1S5Q8TDH9 187 aa3.66□□□□□ -1.82
CCDC50-203ENST00000460064 TMEM158Q8WZ71 300 aa3.66□□□□□ -1.82
CCDC50-203ENST00000460064 DNAJC19Q96DA6 116 aa3.66□□□□□ -1.82
CCDC50-203ENST00000460064 C19orf60Q96EN9 201 aa3.66□□□□□ -1.82
CCDC50-203ENST00000460064 AURKBQ96GD4 344 aaPredicted RBP3.66□□□□□ -1.82
CCDC50-203ENST00000460064 RNF185Q96GF1 192 aa3.66□□□□□ -1.82
CCDC50-203ENST00000460064 SLC29A1Q99808 456 aa3.66□□□□□ -1.82
CCDC50-203ENST00000460064 C20orf24Q9BUV8 137 aa3.66□□□□□ -1.82
CCDC50-203ENST00000460064 IQCGQ9H095 443 aaKnown RBP3.66□□□□□ -1.82
CCDC50-203ENST00000460064 HAUS4Q9H6D7 363 aa3.66□□□□□ -1.82
CCDC50-203ENST00000460064 UGT1A7Q9HAW7 530 aa3.66□□□□□ -1.82
CCDC50-203ENST00000460064 UGT1A10Q9HAW8 530 aa3.66□□□□□ -1.82
CCDC50-203ENST00000460064 UGT1A8Q9HAW9 530 aa3.66□□□□□ -1.82
CCDC50-203ENST00000460064 SLCO1B3Q9NPD5 702 aa3.66□□□□□ -1.82
CCDC50-203ENST00000460064 CTPS2Q9NRF8 586 aa3.66□□□□□ -1.82
CCDC50-203ENST00000460064 KIAA1257Q9ULG3 409 aa3.66□□□□□ -1.82
CCDC50-203ENST00000460064 ATRXP46100 2492 aa3.66□□□□□ -1.82
CCDC50-203ENST00000460064 ZCCHC6Q5VYS8 1495 aaKnown RBP3.66□□□□□ -1.82
CCDC50-203ENST00000460064 CEMIPQ8WUJ3 1361 aa3.65□□□□□ -1.82
CCDC50-203ENST00000460064 NINLQ9Y2I6 1382 aa3.65□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms