RNA–Protein interactions for RNA: ENST00000459904.1

LMNA-209, Transcript of lamin A/C, human

TSL 2

Gene LMNA, Length 916 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMNA-209	ENST00000459904	KLF3	P57682	345 aa	Predicted RBP	12.82	□□□□□ -0.36
LMNA-209	ENST00000459904	FADD	Q13158	208 aa		12.82	□□□□□ -0.36
LMNA-209	ENST00000459904	FAM91A1	Q658Y4	838 aa		12.82	□□□□□ -0.36
LMNA-209	ENST00000459904	TMEM154	Q6P9G4	183 aa		12.82	□□□□□ -0.36
LMNA-209	ENST00000459904	C5orf46	Q6UWT4	87 aa		12.82	□□□□□ -0.36
LMNA-209	ENST00000459904	C1QL2	Q7Z5L3	287 aa		12.82	□□□□□ -0.36
LMNA-209	ENST00000459904	PXK	Q7Z7A4	578 aa		12.82	□□□□□ -0.36
LMNA-209	ENST00000459904	SCAI	Q8N9R8	606 aa		12.82	□□□□□ -0.36
LMNA-209	ENST00000459904	SYT14	Q8NB59	555 aa		12.82	□□□□□ -0.36
LMNA-209	ENST00000459904	GPR32P1	Q8NGA4	272 aa		12.82	□□□□□ -0.36
LMNA-209	ENST00000459904	SLC35B4	Q969S0	331 aa		12.82	□□□□□ -0.36
LMNA-209	ENST00000459904	EPYC	Q99645	322 aa		12.82	□□□□□ -0.36
LMNA-209	ENST00000459904	TES	Q9UGI8	421 aa	Known RBP	12.82	□□□□□ -0.36
LMNA-209	ENST00000459904	PRDM4	Q9UKN5	801 aa		12.82	□□□□□ -0.36
LMNA-209	ENST00000459904	DHH	O43323	396 aa		12.81	□□□□□ -0.36
LMNA-209	ENST00000459904	RNF13	O43567	381 aa		12.81	□□□□□ -0.36
LMNA-209	ENST00000459904	OR6A2	O95222	327 aa		12.81	□□□□□ -0.36
LMNA-209	ENST00000459904	IGHV2-5	P01817	119 aa		12.81	□□□□□ -0.36
LMNA-209	ENST00000459904	CDA	P32320	146 aa		12.81	□□□□□ -0.36
LMNA-209	ENST00000459904	RAD52	P43351	418 aa		12.81	□□□□□ -0.36
LMNA-209	ENST00000459904	SELPLG	Q14242	412 aa		12.81	□□□□□ -0.36
LMNA-209	ENST00000459904	DCAF12L2	Q5VW00	463 aa		12.81	□□□□□ -0.36
LMNA-209	ENST00000459904	PIWIL3	Q7Z3Z3	882 aa	Known RBP	12.81	□□□□□ -0.36
LMNA-209	ENST00000459904	CPEB3	Q8NE35	698 aa	Known RBP	12.81	□□□□□ -0.36
LMNA-209	ENST00000459904	OR6T1	Q8NGN1	323 aa		12.81	□□□□□ -0.36
LMNA-209	ENST00000459904	RBM4	Q9BWF3	364 aa	Known RBP	12.81	□□□□□ -0.36
LMNA-209	ENST00000459904	RAD21L1	Q9H4I0	556 aa		12.81	□□□□□ -0.36
LMNA-209	ENST00000459904	ZNF385D	Q9H6B1	395 aa		12.81	□□□□□ -0.36
LMNA-209	ENST00000459904	SLC52A3	Q9NQ40	469 aa		12.81	□□□□□ -0.36
LMNA-209	ENST00000459904	UBAP1	Q9NZ09	502 aa		12.81	□□□□□ -0.36
LMNA-209	ENST00000459904	CCDC167	Q9P0B6	97 aa		12.81	□□□□□ -0.36
LMNA-209	ENST00000459904	ZNF346	Q9UL40	294 aa	Known RBP	12.81	□□□□□ -0.36
LMNA-209	ENST00000459904	ARL2BP	Q9Y2Y0	163 aa		12.81	□□□□□ -0.36
LMNA-209	ENST00000459904	SOX21	Q9Y651	276 aa	Predicted RBP	12.81	□□□□□ -0.36
LMNA-209	ENST00000459904	IGLV3-9	A0A075B6K5	115 aa		12.8	□□□□□ -0.36
LMNA-209	ENST00000459904	ISPD	A4D126	451 aa		12.8	□□□□□ -0.36
LMNA-209	ENST00000459904	NDUFAB1	O14561	156 aa		12.8	□□□□□ -0.36
LMNA-209	ENST00000459904	MFN2	O95140	757 aa		12.8	□□□□□ -0.36
LMNA-209	ENST00000459904	F13B	P05160	661 aa		12.8	□□□□□ -0.36
LMNA-209	ENST00000459904	PGA4	P0DJD7	388 aa		12.8	□□□□□ -0.36
LMNA-209	ENST00000459904	PGA3	P0DJD8	388 aa		12.8	□□□□□ -0.36
LMNA-209	ENST00000459904	ZNF250	P15622	560 aa		12.8	□□□□□ -0.36
LMNA-209	ENST00000459904	ZFP36	P26651	326 aa	Known RBP	12.8	□□□□□ -0.36
LMNA-209	ENST00000459904	CRYBB2	P43320	205 aa		12.8	□□□□□ -0.36
LMNA-209	ENST00000459904	UCP2	P55851	309 aa		12.8	□□□□□ -0.36
LMNA-209	ENST00000459904	UBA52	P62987	128 aa	Known RBP	12.8	□□□□□ -0.36
LMNA-209	ENST00000459904	ZP4	Q12836	540 aa		12.8	□□□□□ -0.36
LMNA-209	ENST00000459904	ZNF74	Q16587	644 aa		12.8	□□□□□ -0.36
LMNA-209	ENST00000459904	DUSP7	Q16829	419 aa		12.8	□□□□□ -0.36
LMNA-209	ENST00000459904	ENTPD8	Q5MY95	495 aa		12.8	□□□□□ -0.36
LMNA-209	ENST00000459904	LRIF1	Q5T3J3	769 aa		12.8	□□□□□ -0.36
LMNA-209	ENST00000459904	METTL21C	Q5VZV1	264 aa		12.8	□□□□□ -0.36
LMNA-209	ENST00000459904	REP15	Q6BDI9	236 aa		12.8	□□□□□ -0.36
LMNA-209	ENST00000459904	LINC00114	Q6XXX2	140 aa		12.8	□□□□□ -0.36
LMNA-209	ENST00000459904	SLC16A14	Q7RTX9	510 aa		12.8	□□□□□ -0.36
LMNA-209	ENST00000459904	JAZF1	Q86VZ6	243 aa		12.8	□□□□□ -0.36
LMNA-209	ENST00000459904	KRT73	Q86Y46	540 aa		12.8	□□□□□ -0.36
LMNA-209	ENST00000459904	ARMC8	Q8IUR7	673 aa		12.8	□□□□□ -0.36
LMNA-209	ENST00000459904	BCL6B	Q8N143	479 aa	Predicted RBP	12.8	□□□□□ -0.36
LMNA-209	ENST00000459904	BPIFB2	Q8N4F0	458 aa		12.8	□□□□□ -0.36
LMNA-209	ENST00000459904	OR1J1	Q8NGS3	322 aa		12.8	□□□□□ -0.36
LMNA-209	ENST00000459904	OR6S1	Q8NH40	331 aa		12.8	□□□□□ -0.36
LMNA-209	ENST00000459904	OR6X1	Q8NH79	312 aa		12.8	□□□□□ -0.36
LMNA-209	ENST00000459904	SGMS2	Q8NHU3	365 aa		12.8	□□□□□ -0.36
LMNA-209	ENST00000459904	SNX33	Q8WV41	574 aa		12.8	□□□□□ -0.36
LMNA-209	ENST00000459904	CCL17	Q92583	94 aa		12.8	□□□□□ -0.36
LMNA-209	ENST00000459904	ZNF566	Q969W8	418 aa		12.8	□□□□□ -0.36
LMNA-209	ENST00000459904	SPDL1	Q96EA4	605 aa		12.8	□□□□□ -0.36
LMNA-209	ENST00000459904	TMEM43	Q9BTV4	400 aa		12.8	□□□□□ -0.36
LMNA-209	ENST00000459904	C7orf69	Q9H7B7	122 aa		12.8	□□□□□ -0.36
LMNA-209	ENST00000459904	DECR2	Q9NUI1	292 aa		12.8	□□□□□ -0.36
LMNA-209	ENST00000459904	NIPSNAP3A	Q9UFN0	247 aa	Predicted RBP	12.8	□□□□□ -0.36
LMNA-209	ENST00000459904	SLC7A7	Q9UM01	511 aa		12.8	□□□□□ -0.36
LMNA-209	ENST00000459904	TRBV5-3	A0A0A0MS03	114 aa		12.79	□□□□□ -0.36
LMNA-209	ENST00000459904	IGKV1D-43	A0A0B4J1Z2	117 aa		12.79	□□□□□ -0.36
LMNA-209	ENST00000459904	TMPRSS2	O15393	492 aa		12.79	□□□□□ -0.36
LMNA-209	ENST00000459904	PRSS23	O95084	383 aa		12.79	□□□□□ -0.36
LMNA-209	ENST00000459904	SLC2A10	O95528	541 aa		12.79	□□□□□ -0.36
LMNA-209	ENST00000459904	IGHV1-46	P01743	117 aa		12.79	□□□□□ -0.36
LMNA-209	ENST00000459904	SLC6A2	P23975	617 aa		12.79	□□□□□ -0.36
LMNA-209	ENST00000459904	WNT5A	P41221	380 aa		12.79	□□□□□ -0.36
LMNA-209	ENST00000459904	MRPS11	P82912	194 aa	Known RBP	12.79	□□□□□ -0.36
LMNA-209	ENST00000459904	THEM4	Q5T1C6	240 aa		12.79	□□□□□ -0.36
LMNA-209	ENST00000459904	TMEM53	Q6P2H8	277 aa		12.79	□□□□□ -0.36
LMNA-209	ENST00000459904	BLOC1S3	Q6QNY0	202 aa		12.79	□□□□□ -0.36
LMNA-209	ENST00000459904	USP43	Q70EL4	1123 aa		12.79	□□□□□ -0.36
LMNA-209	ENST00000459904	PTOV1	Q86YD1	416 aa		12.79	□□□□□ -0.36
LMNA-209	ENST00000459904	ZNF101	Q8IZC7	436 aa		12.79	□□□□□ -0.36
LMNA-209	ENST00000459904	SIGLECL1	Q8N7X8	197 aa		12.79	□□□□□ -0.36
LMNA-209	ENST00000459904	CCDC197	Q8NCU1	140 aa		12.79	□□□□□ -0.36
LMNA-209	ENST00000459904	RBM15B	Q8NDT2	890 aa	Known RBP	12.79	□□□□□ -0.36
LMNA-209	ENST00000459904	BHLHE22	Q8NFJ8	381 aa	Predicted RBP	12.79	□□□□□ -0.36
LMNA-209	ENST00000459904	AKR7L	Q8NHP1	331 aa		12.79	□□□□□ -0.36
LMNA-209	ENST00000459904	GEMIN6	Q8WXD5	167 aa	Known RBP	12.79	□□□□□ -0.36
LMNA-209	ENST00000459904	C11orf40	Q8WZ69	217 aa		12.79	□□□□□ -0.36
LMNA-209	ENST00000459904	MCHR2	Q969V1	340 aa		12.79	□□□□□ -0.36
LMNA-209	ENST00000459904	ARHGDIG	Q99819	225 aa		12.79	□□□□□ -0.36
LMNA-209	ENST00000459904	GAL3ST1	Q99999	423 aa		12.79	□□□□□ -0.36
LMNA-209	ENST00000459904	CPPED1	Q9BRF8	314 aa	Predicted RBP	12.79	□□□□□ -0.36
LMNA-209	ENST00000459904	SPATA5L1	Q9BVQ7	753 aa		12.79	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms