RNA–Protein interactions for RNA: ENST00000458591.6

SCFD1-203, Transcript of sec1 family domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCFD1, Length 2,359 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-203ENST00000458591 ZNF595Q8IYB9 648 aa12.79□□□□□ -0.36
SCFD1-203ENST00000458591 TSEN15Q8WW01 171 aaKnown RBP12.79□□□□□ -0.36
SCFD1-203ENST00000458591 ZNF578Q96N58 590 aaPredicted RBP12.79□□□□□ -0.36
SCFD1-203ENST00000458591 GAL3ST4Q96RP7 486 aa12.79□□□□□ -0.36
SCFD1-203ENST00000458591 MRI1Q9BV20 369 aa12.79□□□□□ -0.36
SCFD1-203ENST00000458591 TMPRSS13Q9BYE2 586 aa12.79□□□□□ -0.36
SCFD1-203ENST00000458591 FXYD6Q9H0Q3 95 aa12.79□□□□□ -0.36
SCFD1-203ENST00000458591 ELOVL3Q9HB03 270 aa12.79□□□□□ -0.36
SCFD1-203ENST00000458591 KCNMB2Q9Y691 235 aa12.79□□□□□ -0.36
SCFD1-203ENST00000458591 TRBV5-7A0A0A0MS05 114 aa12.79□□□□□ -0.36
SCFD1-203ENST00000458591 TMEM272A0A1B0GTI8 110 aa12.79□□□□□ -0.36
SCFD1-203ENST00000458591 MPZL1O95297 269 aa12.79□□□□□ -0.36
SCFD1-203ENST00000458591 OR1D4P47884 311 aa12.79□□□□□ -0.36
SCFD1-203ENST00000458591 SLC25A1P53007 311 aa12.79□□□□□ -0.36
SCFD1-203ENST00000458591 IGLV3-21P80748 117 aaPredicted RBP12.79□□□□□ -0.36
SCFD1-203ENST00000458591 SHHQ15465 462 aa12.79□□□□□ -0.36
SCFD1-203ENST00000458591 C2orf76Q3KRA6 126 aa12.79□□□□□ -0.36
SCFD1-203ENST00000458591 B3GNTL1Q67FW5 361 aaPredicted RBP12.79□□□□□ -0.36
SCFD1-203ENST00000458591 TMEM151BQ8IW70 566 aa12.79□□□□□ -0.36
SCFD1-203ENST00000458591 PRSS58Q8IYP2 241 aa12.79□□□□□ -0.36
SCFD1-203ENST00000458591 KDM8Q8N371 416 aa12.79□□□□□ -0.36
SCFD1-203ENST00000458591 PTPMT1Q8WUK0 201 aaPredicted RBP12.79□□□□□ -0.36
SCFD1-203ENST00000458591 C15orf40Q8WUR7 153 aa12.79□□□□□ -0.36
SCFD1-203ENST00000458591 RLN3Q8WXF3 142 aa12.79□□□□□ -0.36
SCFD1-203ENST00000458591 AIFM2Q9BRQ8 373 aa12.79□□□□□ -0.36
SCFD1-203ENST00000458591 DZANK1Q9NVP4 752 aa12.79□□□□□ -0.36
SCFD1-203ENST00000458591 MED9Q9NWA0 146 aa12.79□□□□□ -0.36
SCFD1-203ENST00000458591 STEAP1Q9UHE8 339 aa12.79□□□□□ -0.36
SCFD1-203ENST00000458591 PFDN2Q9UHV9 154 aa12.79□□□□□ -0.36
SCFD1-203ENST00000458591 GMEB2Q9UKD1 530 aa12.79□□□□□ -0.36
SCFD1-203ENST00000458591 MFSD2BA6NFX1 497 aa12.78□□□□□ -0.36
SCFD1-203ENST00000458591 SNRPGP15A8MWD9 76 aa12.78□□□□□ -0.36
SCFD1-203ENST00000458591 H7C417 338 aa12.78□□□□□ -0.36
SCFD1-203ENST00000458591 CLDN4O14493 209 aa12.78□□□□□ -0.36
SCFD1-203ENST00000458591 ZNF264O43296 627 aa12.78□□□□□ -0.36
SCFD1-203ENST00000458591 XRCC3O43542 346 aa12.78□□□□□ -0.36
SCFD1-203ENST00000458591 ICOSLGO75144 302 aa12.78□□□□□ -0.36
SCFD1-203ENST00000458591 OR2A4O95047 310 aa12.78□□□□□ -0.36
SCFD1-203ENST00000458591 LPLP06858 475 aa12.78□□□□□ -0.36
SCFD1-203ENST00000458591 HOXD4P09016 255 aaPredicted RBP12.78□□□□□ -0.36
SCFD1-203ENST00000458591 GTF2F2P13984 249 aa12.78□□□□□ -0.36
SCFD1-203ENST00000458591 YPEL5P62699 121 aa12.78□□□□□ -0.36
SCFD1-203ENST00000458591 MFGE8Q08431 387 aaPredicted RBP12.78□□□□□ -0.36
SCFD1-203ENST00000458591 OR10K2Q6IF99 312 aa12.78□□□□□ -0.36
SCFD1-203ENST00000458591 FAM122CQ6P4D5 195 aa12.78□□□□□ -0.36
SCFD1-203ENST00000458591 MARCH3Q86UD3 253 aa12.78□□□□□ -0.36
SCFD1-203ENST00000458591 OR2A7Q96R45 310 aa12.78□□□□□ -0.36
SCFD1-203ENST00000458591 ZC4H2Q9NQZ6 224 aa12.78□□□□□ -0.36
SCFD1-203ENST00000458591 CLEC1BQ9P126 229 aa12.78□□□□□ -0.36
SCFD1-203ENST00000458591 MTFP1Q9UDX5 166 aa12.78□□□□□ -0.36
SCFD1-203ENST00000458591 ZNF230Q9UIE0 474 aaPredicted RBP12.78□□□□□ -0.36
SCFD1-203ENST00000458591 KIR2DS5A0A0G2JLQ3 304 aa12.78□□□□□ -0.36
SCFD1-203ENST00000458591 A0A0G2JNG1 304 aa12.78□□□□□ -0.36
SCFD1-203ENST00000458591 GGT3PA6NGU5 568 aa12.78□□□□□ -0.36
SCFD1-203ENST00000458591 KIR2DS3K7RE56 304 aa12.78□□□□□ -0.36
SCFD1-203ENST00000458591 ZNF254O75437 659 aa12.78□□□□□ -0.36
SCFD1-203ENST00000458591 RP2O75695 350 aa12.78□□□□□ -0.36
SCFD1-203ENST00000458591 IGF2P01344 180 aa12.78□□□□□ -0.36
SCFD1-203ENST00000458591 IL5P05113 134 aa12.78□□□□□ -0.36
SCFD1-203ENST00000458591 PSMD4P55036 377 aaKnown RBP12.78□□□□□ -0.36
SCFD1-203ENST00000458591 ZNF117Q03924 483 aa12.78□□□□□ -0.36
SCFD1-203ENST00000458591 KIR2DS5Q14953 304 aa12.78□□□□□ -0.36
SCFD1-203ENST00000458591 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.78□□□□□ -0.36
SCFD1-203ENST00000458591 ISXQ2M1V0 245 aa12.78□□□□□ -0.36
SCFD1-203ENST00000458591 TUSC1Q2TAM9 212 aa12.78□□□□□ -0.36
SCFD1-203ENST00000458591 ZNF227Q86WZ6 799 aa12.78□□□□□ -0.36
SCFD1-203ENST00000458591 INTS14Q96SY0 518 aa12.78□□□□□ -0.36
SCFD1-203ENST00000458591 UBQLN4Q9NRR5 601 aa12.78□□□□□ -0.36
SCFD1-203ENST00000458591 CGGBP1Q9UFW8 167 aaPredicted RBP12.78□□□□□ -0.36
SCFD1-203ENST00000458591 OPN4Q9UHM6 478 aa12.78□□□□□ -0.36
SCFD1-203ENST00000458591 MRPS33Q9Y291 106 aaKnown RBP12.78□□□□□ -0.36
SCFD1-203ENST00000458591 SPTY2D1-AS1A0A0U1RR47 76 aa12.77□□□□□ -0.36
SCFD1-203ENST00000458591 OR6C65A6NJZ3 312 aa12.77□□□□□ -0.36
SCFD1-203ENST00000458591 KRBOX1C9JBD0 128 aa12.77□□□□□ -0.36
SCFD1-203ENST00000458591 M0QYG6 137 aa12.77□□□□□ -0.36
SCFD1-203ENST00000458591 SCDO00767 359 aa12.77□□□□□ -0.36
SCFD1-203ENST00000458591 NUDT14O95848 222 aa12.77□□□□□ -0.36
SCFD1-203ENST00000458591 LIPCP11150 499 aa12.77□□□□□ -0.36
SCFD1-203ENST00000458591 NAGAP17050 411 aa12.77□□□□□ -0.36
SCFD1-203ENST00000458591 NAT1P18440 290 aa12.77□□□□□ -0.36
SCFD1-203ENST00000458591 SEC61A1P61619 476 aaKnown RBP12.77□□□□□ -0.36
SCFD1-203ENST00000458591 EEF1A1P5Q5VTE0 462 aa12.77□□□□□ -0.36
SCFD1-203ENST00000458591 TMUB2Q71RG4 321 aa12.77□□□□□ -0.36
SCFD1-203ENST00000458591 GPR148Q8TDV2 347 aa12.77□□□□□ -0.36
SCFD1-203ENST00000458591 C4orf45Q96LM5 186 aa12.77□□□□□ -0.36
SCFD1-203ENST00000458591 KLHL15Q96M94 604 aa12.77□□□□□ -0.36
SCFD1-203ENST00000458591 TGM7Q96PF1 710 aa12.77□□□□□ -0.36
SCFD1-203ENST00000458591 UTP23Q9BRU9 249 aaKnown RBP12.77□□□□□ -0.36
SCFD1-203ENST00000458591 TMEM138Q9NPI0 162 aa12.77□□□□□ -0.36
SCFD1-203ENST00000458591 IGHV5-51A0A0C4DH38 117 aa12.77□□□□□ -0.37
SCFD1-203ENST00000458591 UBE2QL1A1L167 161 aa12.77□□□□□ -0.37
SCFD1-203ENST00000458591 NUPL2O15504 423 aaKnown RBP12.77□□□□□ -0.37
SCFD1-203ENST00000458591 HCRTR2O43614 444 aa12.77□□□□□ -0.37
SCFD1-203ENST00000458591 LMX1BO60663 402 aa12.77□□□□□ -0.37
SCFD1-203ENST00000458591 HIST1H2ABP04908 130 aa12.77□□□□□ -0.37
SCFD1-203ENST00000458591 NMBP08949 121 aa12.77□□□□□ -0.37
SCFD1-203ENST00000458591 SPARCP09486 303 aa12.77□□□□□ -0.37
SCFD1-203ENST00000458591 IFI6P09912 130 aa12.77□□□□□ -0.37
SCFD1-203ENST00000458591 PNMTP11086 282 aa12.77□□□□□ -0.37
SCFD1-203ENST00000458591 CD1CP29017 333 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms