RNA–Protein interactions for RNA: ENST00000458038.5

CPNE1-220, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-220ENST00000458038 CLRN1P58418 232 aa18.39■□□□□ 0.53
CPNE1-220ENST00000458038 CCL8P80075 99 aa18.39■□□□□ 0.53
CPNE1-220ENST00000458038 HIST3H3Q16695 136 aa18.39■□□□□ 0.53
CPNE1-220ENST00000458038 FAM209AQ5JX71 171 aa18.39■□□□□ 0.53
CPNE1-220ENST00000458038 DPP10Q8N608 796 aa18.39■□□□□ 0.53
CPNE1-220ENST00000458038 OR4K5Q8NGD3 323 aa18.39■□□□□ 0.53
CPNE1-220ENST00000458038 RASSF5Q8WWW0 418 aa18.39■□□□□ 0.53
CPNE1-220ENST00000458038 ZMYND19Q96E35 227 aaPredicted RBP18.39■□□□□ 0.53
CPNE1-220ENST00000458038 A0A1W2PRG6 482 aa18.38■□□□□ 0.53
CPNE1-220ENST00000458038 TRIM77I1YAP6 450 aa18.38■□□□□ 0.53
CPNE1-220ENST00000458038 J3QLI3 93 aa18.38■□□□□ 0.53
CPNE1-220ENST00000458038 ZNF500O60304 480 aaPredicted RBP18.38■□□□□ 0.53
CPNE1-220ENST00000458038 LYPD3O95274 346 aa18.38■□□□□ 0.53
CPNE1-220ENST00000458038 CLPTM1O96005 669 aa18.38■□□□□ 0.53
CPNE1-220ENST00000458038 NPTX1Q15818 432 aa18.38■□□□□ 0.53
CPNE1-220ENST00000458038 INTS11Q5TA45 600 aaKnown RBP18.38■□□□□ 0.53
CPNE1-220ENST00000458038 UNQ6126/PRO20091Q6UXV3 157 aa18.38■□□□□ 0.53
CPNE1-220ENST00000458038 NANOGNBQ7Z5D8 188 aa18.38■□□□□ 0.53
CPNE1-220ENST00000458038 RBM15BQ8NDT2 890 aaKnown RBP18.38■□□□□ 0.53
CPNE1-220ENST00000458038 GPR32P1Q8NGA4 272 aa18.38■□□□□ 0.53
CPNE1-220ENST00000458038 FAM216AQ8WUB2 273 aa18.38■□□□□ 0.53
CPNE1-220ENST00000458038 STON2Q8WXE9 905 aa18.38■□□□□ 0.53
CPNE1-220ENST00000458038 KCNN2Q9H2S1 579 aa18.38■□□□□ 0.53
CPNE1-220ENST00000458038 ZNF665Q9H7R5 613 aa18.38■□□□□ 0.53
CPNE1-220ENST00000458038 DECR2Q9NUI1 292 aa18.38■□□□□ 0.53
CPNE1-220ENST00000458038 STX18Q9P2W9 335 aaKnown RBP18.38■□□□□ 0.53
CPNE1-220ENST00000458038 SLC7A7Q9UM01 511 aa18.38■□□□□ 0.53
CPNE1-220ENST00000458038 TRIM33Q9UPN9 1127 aa18.38■□□□□ 0.53
CPNE1-220ENST00000458038 NDUFAF1Q9Y375 327 aa18.38■□□□□ 0.53
CPNE1-220ENST00000458038 IGHV1-69-2A0A0G2JMI3 117 aa18.37■□□□□ 0.53
CPNE1-220ENST00000458038 IGHV3-13P01766 116 aa18.37■□□□□ 0.53
CPNE1-220ENST00000458038 UMPSP11172 480 aa18.37■□□□□ 0.53
CPNE1-220ENST00000458038 CD247P20963 164 aa18.37■□□□□ 0.53
CPNE1-220ENST00000458038 DRD4P21917 467 aa18.37■□□□□ 0.53
CPNE1-220ENST00000458038 HILS1P60008 231 aa18.37■□□□□ 0.53
CPNE1-220ENST00000458038 ACTG1P63261 375 aa18.37■□□□□ 0.53
CPNE1-220ENST00000458038 ALKBH6Q3KRA9 238 aa18.37■□□□□ 0.53
CPNE1-220ENST00000458038 AGBL2Q5U5Z8 902 aa18.37■□□□□ 0.53
CPNE1-220ENST00000458038 DHDDSQ86SQ9 333 aa18.37■□□□□ 0.53
CPNE1-220ENST00000458038 C1orf174Q8IYL3 243 aa18.37■□□□□ 0.53
CPNE1-220ENST00000458038 PAQR4Q8N4S7 273 aaPredicted RBP18.37■□□□□ 0.53
CPNE1-220ENST00000458038 LRRC17Q8N6Y2 441 aa18.37■□□□□ 0.53
CPNE1-220ENST00000458038 SLC26A7Q8TE54 656 aa18.37■□□□□ 0.53
CPNE1-220ENST00000458038 TSPEARQ8WU66 669 aa18.37■□□□□ 0.53
CPNE1-220ENST00000458038 MCHR2Q969V1 340 aa18.37■□□□□ 0.53
CPNE1-220ENST00000458038 TIMD4Q96H15 378 aa18.37■□□□□ 0.53
CPNE1-220ENST00000458038 SEPHS2Q99611 448 aa18.37■□□□□ 0.53
CPNE1-220ENST00000458038 CGREF1Q99674 301 aa18.37■□□□□ 0.53
CPNE1-220ENST00000458038 RBM4Q9BWF3 364 aaKnown RBP18.37■□□□□ 0.53
CPNE1-220ENST00000458038 PLA2G12AQ9BZM1 189 aa18.37■□□□□ 0.53
CPNE1-220ENST00000458038 G6PC2Q9NQR9 355 aa18.37■□□□□ 0.53
CPNE1-220ENST00000458038 A0A0G2JMP0 313 aa18.36■□□□□ 0.53
CPNE1-220ENST00000458038 A0A0X1KG70 313 aa18.36■□□□□ 0.53
CPNE1-220ENST00000458038 BLOC1S5-TXNDC5H3BN57 136 aa18.36■□□□□ 0.53
CPNE1-220ENST00000458038 CDC14BO60729 498 aa18.36■□□□□ 0.53
CPNE1-220ENST00000458038 IGF2P01344 180 aa18.36■□□□□ 0.53
CPNE1-220ENST00000458038 OPN1SWP03999 348 aa18.36■□□□□ 0.53
CPNE1-220ENST00000458038 THY1P04216 161 aa18.36■□□□□ 0.53
CPNE1-220ENST00000458038 EPHA1P21709 976 aa18.36■□□□□ 0.53
CPNE1-220ENST00000458038 GATA3P23771 443 aa18.36■□□□□ 0.53
CPNE1-220ENST00000458038 APLNRP35414 380 aa18.36■□□□□ 0.53
CPNE1-220ENST00000458038 LIMS1P48059 325 aa18.36■□□□□ 0.53
CPNE1-220ENST00000458038 DAP3P51398 398 aaKnown RBP18.36■□□□□ 0.53
CPNE1-220ENST00000458038 MELKQ14680 651 aa18.36■□□□□ 0.53
CPNE1-220ENST00000458038 MGAM2Q2M2H8 2515 aa18.36■□□□□ 0.53
CPNE1-220ENST00000458038 OR4M2Q8NGB6 313 aa18.36■□□□□ 0.53
CPNE1-220ENST00000458038 RAB1CQ92928 201 aa18.36■□□□□ 0.53
CPNE1-220ENST00000458038 GCDHQ92947 438 aaPredicted RBP18.36■□□□□ 0.53
CPNE1-220ENST00000458038 MRPL13Q9BYD1 178 aaKnown RBP18.36■□□□□ 0.53
CPNE1-220ENST00000458038 KAT8Q9H7Z6 458 aaKnown RBP18.36■□□□□ 0.53
CPNE1-220ENST00000458038 SIAEQ9HAT2 523 aa18.36■□□□□ 0.53
CPNE1-220ENST00000458038 TMEM89A2RUT3 159 aa18.35■□□□□ 0.53
CPNE1-220ENST00000458038 CLDN25C9JDP6 229 aa18.35■□□□□ 0.53
CPNE1-220ENST00000458038 MCIDASD6RGH6 385 aa18.35■□□□□ 0.53
CPNE1-220ENST00000458038 ANGPT2O15123 496 aa18.35■□□□□ 0.53
CPNE1-220ENST00000458038 TPD52L2O43399 206 aaKnown RBP18.35■□□□□ 0.53
CPNE1-220ENST00000458038 MPZL1O95297 269 aa18.35■□□□□ 0.53
CPNE1-220ENST00000458038 NR2C1P13056 603 aa18.35■□□□□ 0.53
CPNE1-220ENST00000458038 CCL2P13500 99 aa18.35■□□□□ 0.53
CPNE1-220ENST00000458038 PCGF2P35227 344 aa18.35■□□□□ 0.53
CPNE1-220ENST00000458038 ZNF133P52736 654 aaPredicted RBP18.35■□□□□ 0.53
CPNE1-220ENST00000458038 MVKQ03426 396 aa18.35■□□□□ 0.53
CPNE1-220ENST00000458038 HSF2Q03933 536 aa18.35■□□□□ 0.53
CPNE1-220ENST00000458038 HFEQ30201 348 aa18.35■□□□□ 0.53
CPNE1-220ENST00000458038 RBM45Q8IUH3 476 aaKnown RBP18.35■□□□□ 0.53
CPNE1-220ENST00000458038 CPEB3Q8NE35 698 aaKnown RBP18.35■□□□□ 0.53
CPNE1-220ENST00000458038 NOXO1Q8NFA2 376 aa18.35■□□□□ 0.53
CPNE1-220ENST00000458038 VANGL1Q8TAA9 524 aaPredicted RBP18.35■□□□□ 0.53
CPNE1-220ENST00000458038 SUCNR1Q9BXA5 334 aa18.35■□□□□ 0.53
CPNE1-220ENST00000458038 SAP30LQ9HAJ7 183 aa18.35■□□□□ 0.53
CPNE1-220ENST00000458038 KPNA4O00629 521 aaPredicted RBP18.34■□□□□ 0.53
CPNE1-220ENST00000458038 PLPP2O43688 288 aa18.34■□□□□ 0.53
CPNE1-220ENST00000458038 MT-ND1P03886 318 aa18.34■□□□□ 0.53
CPNE1-220ENST00000458038 MMP7P09237 267 aaPredicted RBP18.34■□□□□ 0.53
CPNE1-220ENST00000458038 ACADSP16219 412 aa18.34■□□□□ 0.53
CPNE1-220ENST00000458038 LIPAP38571 399 aa18.34■□□□□ 0.53
CPNE1-220ENST00000458038 RBM34P42696 430 aaKnown RBP18.34■□□□□ 0.53
CPNE1-220ENST00000458038 ARFIP2P53365 341 aa18.34■□□□□ 0.53
CPNE1-220ENST00000458038 MRPS34P82930 218 aaKnown RBP18.34■□□□□ 0.53
CPNE1-220ENST00000458038 ZNF718Q3SXZ3 478 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms