RNA–Protein interactions for RNA: ENST00000457055.1

VPS41-209, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-209ENST00000457055 CNTN1Q12860 1018 aa4.84□□□□□ -1.63
VPS41-209ENST00000457055 TPBGQ13641 420 aa4.84□□□□□ -1.63
VPS41-209ENST00000457055 GK3PQ14409 553 aa4.84□□□□□ -1.63
VPS41-209ENST00000457055 KCNJ11Q14654 390 aa4.84□□□□□ -1.63
VPS41-209ENST00000457055 ZNF630Q2M218 657 aaPredicted RBP4.84□□□□□ -1.63
VPS41-209ENST00000457055 ODF4Q2M2E3 257 aa4.84□□□□□ -1.63
VPS41-209ENST00000457055 SERTAD4-AS1Q5TG53 156 aa4.84□□□□□ -1.63
VPS41-209ENST00000457055 SAXO2Q658L1 398 aa4.84□□□□□ -1.63
VPS41-209ENST00000457055 SLC27A4Q6P1M0 643 aa4.84□□□□□ -1.63
VPS41-209ENST00000457055 TMEM65Q6PI78 240 aa4.84□□□□□ -1.63
VPS41-209ENST00000457055 PLET1Q6UQ28 207 aa4.84□□□□□ -1.63
VPS41-209ENST00000457055 CD164L2Q6UWJ8 174 aa4.84□□□□□ -1.63
VPS41-209ENST00000457055 CDHR3Q6ZTQ4 885 aa4.84□□□□□ -1.63
VPS41-209ENST00000457055 SEM1Q6ZVN7 128 aa4.84□□□□□ -1.63
VPS41-209ENST00000457055 SSX6Q7RTT6 188 aa4.84□□□□□ -1.63
VPS41-209ENST00000457055 ERI1Q8IV48 349 aaKnown RBP4.84□□□□□ -1.63
VPS41-209ENST00000457055 OR6V1Q8N148 313 aa4.84□□□□□ -1.63
VPS41-209ENST00000457055 C4orf33Q8N1A6 199 aa4.84□□□□□ -1.63
VPS41-209ENST00000457055 SLC5A8Q8N695 610 aa4.84□□□□□ -1.63
VPS41-209ENST00000457055 AQP11Q8NBQ7 271 aa4.84□□□□□ -1.63
VPS41-209ENST00000457055 LFNGQ8NES3 379 aa4.84□□□□□ -1.63
VPS41-209ENST00000457055 MBD3L2Q8NHZ7 208 aaPredicted RBP4.84□□□□□ -1.63
VPS41-209ENST00000457055 ABHD3Q8WU67 409 aa4.84□□□□□ -1.63
VPS41-209ENST00000457055 SFT2D1Q8WV19 159 aa4.84□□□□□ -1.63
VPS41-209ENST00000457055 ASB17Q8WXJ9 295 aa4.84□□□□□ -1.63
VPS41-209ENST00000457055 RERGQ96A58 199 aaPredicted RBP4.84□□□□□ -1.63
VPS41-209ENST00000457055 FAF2Q96CS3 445 aa4.84□□□□□ -1.63
VPS41-209ENST00000457055 CXorf40BQ96DE9 158 aa4.84□□□□□ -1.63
VPS41-209ENST00000457055 ZBED6CLQ96FA7 236 aaPredicted RBP4.84□□□□□ -1.63
VPS41-209ENST00000457055 CPNE2Q96FN4 548 aaPredicted RBP4.84□□□□□ -1.63
VPS41-209ENST00000457055 MS4A14Q96JA4 679 aa4.84□□□□□ -1.63
VPS41-209ENST00000457055 ZNF75AQ96N20 296 aa4.84□□□□□ -1.63
VPS41-209ENST00000457055 KCNA7Q96RP8 456 aa4.84□□□□□ -1.63
VPS41-209ENST00000457055 RASL10BQ96S79 203 aa4.84□□□□□ -1.63
VPS41-209ENST00000457055 FEVQ99581 238 aa4.84□□□□□ -1.63
VPS41-209ENST00000457055 CBWD1Q9BRT8 395 aa4.84□□□□□ -1.63
VPS41-209ENST00000457055 TMEM208Q9BTX3 173 aa4.84□□□□□ -1.63
VPS41-209ENST00000457055 OSBPL11Q9BXB4 747 aa4.84□□□□□ -1.63
VPS41-209ENST00000457055 MFSD1Q9H3U5 465 aa4.84□□□□□ -1.63
VPS41-209ENST00000457055 ANKRD19PQ9H560 264 aa4.84□□□□□ -1.63
VPS41-209ENST00000457055 CLMPQ9H6B4 373 aa4.84□□□□□ -1.63
VPS41-209ENST00000457055 PRSS16Q9NQE7 514 aa4.84□□□□□ -1.63
VPS41-209ENST00000457055 ASB6Q9NWX5 421 aa4.84□□□□□ -1.63
VPS41-209ENST00000457055 BFARQ9NZS9 450 aa4.84□□□□□ -1.63
VPS41-209ENST00000457055 P2RX2Q9UBL9 471 aa4.84□□□□□ -1.63
VPS41-209ENST00000457055 OR14J1Q9UGF5 321 aa4.84□□□□□ -1.63
VPS41-209ENST00000457055 RSL24D1Q9UHA3 163 aaKnown RBP4.84□□□□□ -1.63
VPS41-209ENST00000457055 SLC25A13Q9UJS0 675 aa4.84□□□□□ -1.63
VPS41-209ENST00000457055 NCOR1O75376 2440 aa4.84□□□□□ -1.64
VPS41-209ENST00000457055 MUC3AQ02505 3323 aa4.84□□□□□ -1.64
VPS41-209ENST00000457055 EDC4Q6P2E9 1401 aaKnown RBP4.83□□□□□ -1.64
VPS41-209ENST00000457055 ADGRA3Q8IWK6 1321 aa4.83□□□□□ -1.64
VPS41-209ENST00000457055 A0A1B0GTW7 788 aa4.83□□□□□ -1.64
VPS41-209ENST00000457055 GXYLT2A0PJZ3 443 aa4.83□□□□□ -1.64
VPS41-209ENST00000457055 LINC00862A6NCI5 91 aa4.83□□□□□ -1.64
VPS41-209ENST00000457055 FAM90A10PA6NDY2 464 aa4.83□□□□□ -1.64
VPS41-209ENST00000457055 SEC14L6B5MCN3 397 aa4.83□□□□□ -1.64
VPS41-209ENST00000457055 PTGESO14684 152 aa4.83□□□□□ -1.64
VPS41-209ENST00000457055 CYB5BO43169 146 aa4.83□□□□□ -1.64
VPS41-209ENST00000457055 RAD51CO43502 376 aa4.83□□□□□ -1.64
VPS41-209ENST00000457055 UGT2B11O75310 529 aa4.83□□□□□ -1.64
VPS41-209ENST00000457055 FCN3O75636 299 aa4.83□□□□□ -1.64
VPS41-209ENST00000457055 EIF3GO75821 320 aaKnown RBP eCLIP4.83□□□□□ -1.64
VPS41-209ENST00000457055 NFATC1O95644 943 aa4.83□□□□□ -1.64
VPS41-209ENST00000457055 LATS1O95835 1130 aa4.83□□□□□ -1.64
VPS41-209ENST00000457055 PDYNP01213 254 aa4.83□□□□□ -1.64
VPS41-209ENST00000457055 IGLV2-14P01704 120 aa4.83□□□□□ -1.64
VPS41-209ENST00000457055 MT-ND4P03905 459 aa4.83□□□□□ -1.64
VPS41-209ENST00000457055 THY1P04216 161 aa4.83□□□□□ -1.64
VPS41-209ENST00000457055 HTR1AP08908 422 aa4.83□□□□□ -1.64
VPS41-209ENST00000457055 NUDT17P0C025 328 aa4.83□□□□□ -1.64
VPS41-209ENST00000457055 RAP2AP10114 183 aa4.83□□□□□ -1.64
VPS41-209ENST00000457055 ZNF182P17025 639 aaPredicted RBP4.83□□□□□ -1.64
VPS41-209ENST00000457055 AKR1C4P17516 323 aa4.83□□□□□ -1.64
VPS41-209ENST00000457055 CELP19835 753 aa4.83□□□□□ -1.64
VPS41-209ENST00000457055 LHCGRP22888 699 aa4.83□□□□□ -1.64
VPS41-209ENST00000457055 F2RP25116 425 aa4.83□□□□□ -1.64
VPS41-209ENST00000457055 ATP5A1P25705 553 aaKnown RBP4.83□□□□□ -1.64
VPS41-209ENST00000457055 IVDP26440 423 aa4.83□□□□□ -1.64
VPS41-209ENST00000457055 ACADLP28330 430 aa4.83□□□□□ -1.64
VPS41-209ENST00000457055 ADORA1P30542 326 aa4.83□□□□□ -1.64
VPS41-209ENST00000457055 RFC3P40938 356 aa4.83□□□□□ -1.64
VPS41-209ENST00000457055 MAP2K4P45985 399 aa4.83□□□□□ -1.64
VPS41-209ENST00000457055 SLC6A8P48029 635 aa4.83□□□□□ -1.64
VPS41-209ENST00000457055 LHX1P48742 406 aa4.83□□□□□ -1.64
VPS41-209ENST00000457055 CAV2P51636 162 aa4.83□□□□□ -1.64
VPS41-209ENST00000457055 ATP1B3P54709 279 aa4.83□□□□□ -1.64
VPS41-209ENST00000457055 MTCP1P56278 107 aa4.83□□□□□ -1.64
VPS41-209ENST00000457055 KLF3P57682 345 aaPredicted RBP4.83□□□□□ -1.64
VPS41-209ENST00000457055 POLR2LP62875 67 aaKnown RBP4.83□□□□□ -1.64
VPS41-209ENST00000457055 EMX2Q04743 252 aa4.83□□□□□ -1.64
VPS41-209ENST00000457055 ST3GAL3Q11203 375 aa4.83□□□□□ -1.64
VPS41-209ENST00000457055 TWF1Q12792 350 aa4.83□□□□□ -1.64
VPS41-209ENST00000457055 MLLT11Q13015 90 aaPredicted RBP4.83□□□□□ -1.64
VPS41-209ENST00000457055 SELENBP1Q13228 472 aa4.83□□□□□ -1.64
VPS41-209ENST00000457055 IL13RA2Q14627 380 aa4.83□□□□□ -1.64
VPS41-209ENST00000457055 C16orf72Q14CZ0 275 aa4.83□□□□□ -1.64
VPS41-209ENST00000457055 TSNQ15631 228 aaKnown RBP4.83□□□□□ -1.64
VPS41-209ENST00000457055 PTGISQ16647 500 aa4.83□□□□□ -1.64
VPS41-209ENST00000457055 DUSP6Q16828 381 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms