RNA–Protein interactions for RNA: ENST00000457039.6

SMPD4-215, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 940 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-215ENST00000457039 TMEM38BQ9NVV0 291 aa12.36□□□□□ -0.43
SMPD4-215ENST00000457039 NPAP1Q9NZP6 1156 aa12.36□□□□□ -0.43
SMPD4-215ENST00000457039 OAZ3Q9UMX2 235 aa12.36□□□□□ -0.43
SMPD4-215ENST00000457039 POFUT2Q9Y2G5 429 aa12.36□□□□□ -0.43
SMPD4-215ENST00000457039 UGT2A1Q9Y4X1 527 aa12.36□□□□□ -0.43
SMPD4-215ENST00000457039 HRNRQ86YZ3 2850 aaPredicted RBP12.35□□□□□ -0.43
SMPD4-215ENST00000457039 ZNF503-AS2A6NEH8 195 aa12.35□□□□□ -0.43
SMPD4-215ENST00000457039 CTAG2O75638 210 aa12.35□□□□□ -0.43
SMPD4-215ENST00000457039 OSMP13725 252 aa12.35□□□□□ -0.43
SMPD4-215ENST00000457039 B4GALT1P15291 398 aa12.35□□□□□ -0.43
SMPD4-215ENST00000457039 HIST1H1CP16403 213 aaKnown RBP12.35□□□□□ -0.43
SMPD4-215ENST00000457039 SSTR2P30874 369 aa12.35□□□□□ -0.43
SMPD4-215ENST00000457039 TLE4Q04727 773 aa12.35□□□□□ -0.43
SMPD4-215ENST00000457039 NRN1LQ496H8 165 aa12.35□□□□□ -0.43
SMPD4-215ENST00000457039 BEX5Q5H9J7 111 aa12.35□□□□□ -0.43
SMPD4-215ENST00000457039 KDM4DQ6B0I6 523 aa12.35□□□□□ -0.43
SMPD4-215ENST00000457039 KLHL24Q6TFL4 600 aa12.35□□□□□ -0.43
SMPD4-215ENST00000457039 ZNF813Q6ZN06 617 aa12.35□□□□□ -0.43
SMPD4-215ENST00000457039 PARP8Q8N3A8 854 aa12.35□□□□□ -0.43
SMPD4-215ENST00000457039 OR2T33Q8NG76 320 aa12.35□□□□□ -0.43
SMPD4-215ENST00000457039 MUCL1Q96DR8 90 aa12.35□□□□□ -0.43
SMPD4-215ENST00000457039 DDOQ99489 341 aa12.35□□□□□ -0.43
SMPD4-215ENST00000457039 SYT4Q9H2B2 425 aa12.35□□□□□ -0.43
SMPD4-215ENST00000457039 ZNF556Q9HAH1 456 aa12.35□□□□□ -0.43
SMPD4-215ENST00000457039 RASSF1Q9NS23 344 aa12.35□□□□□ -0.43
SMPD4-215ENST00000457039 ZNF224Q9NZL3 707 aa12.35□□□□□ -0.43
SMPD4-215ENST00000457039 BAIAP2Q9UQB8 552 aa12.35□□□□□ -0.43
SMPD4-215ENST00000457039 SETXQ7Z333 2677 aaKnown RBP12.34□□□□□ -0.43
SMPD4-215ENST00000457039 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.34□□□□□ -0.43
SMPD4-215ENST00000457039 A0A1W2PPR1 153 aa12.34□□□□□ -0.43
SMPD4-215ENST00000457039 CTLA4P16410 223 aa12.34□□□□□ -0.43
SMPD4-215ENST00000457039 HOXC12P31275 282 aa12.34□□□□□ -0.43
SMPD4-215ENST00000457039 ZNF84P51523 738 aa12.34□□□□□ -0.43
SMPD4-215ENST00000457039 MRPS34P82930 218 aaKnown RBP12.34□□□□□ -0.43
SMPD4-215ENST00000457039 PPP2R2BQ00005 443 aa12.34□□□□□ -0.43
SMPD4-215ENST00000457039 ETFDHQ16134 617 aa12.34□□□□□ -0.43
SMPD4-215ENST00000457039 CCDC36Q8IYA8 594 aa12.34□□□□□ -0.43
SMPD4-215ENST00000457039 SLC22A24Q8N4F4 322 aa12.34□□□□□ -0.43
SMPD4-215ENST00000457039 NPEPL1Q8NDH3 523 aa12.34□□□□□ -0.43
SMPD4-215ENST00000457039 ICA1LQ8NDH6 482 aa12.34□□□□□ -0.43
SMPD4-215ENST00000457039 OR4K13Q8NH42 304 aa12.34□□□□□ -0.43
SMPD4-215ENST00000457039 TEX47Q8TBZ9 253 aa12.34□□□□□ -0.43
SMPD4-215ENST00000457039 NSMAFQ92636 917 aa12.34□□□□□ -0.43
SMPD4-215ENST00000457039 NABP1Q96AH0 204 aa12.34□□□□□ -0.43
SMPD4-215ENST00000457039 NMNAT3Q96T66 252 aa12.34□□□□□ -0.43
SMPD4-215ENST00000457039 PAPOLBQ9NRJ5 636 aaKnown RBP12.34□□□□□ -0.43
SMPD4-215ENST00000457039 B3GNT2Q9NY97 397 aa12.34□□□□□ -0.43
SMPD4-215ENST00000457039 KIF17Q9P2E2 1029 aa12.34□□□□□ -0.43
SMPD4-215ENST00000457039 TMEFF2Q9UIK5 374 aaPredicted RBP12.34□□□□□ -0.43
SMPD4-215ENST00000457039 OR6C68A6NDL8 312 aa12.33□□□□□ -0.44
SMPD4-215ENST00000457039 DPRXA6NFQ7 191 aa12.33□□□□□ -0.44
SMPD4-215ENST00000457039 SAC3D1A6NKF1 404 aa12.33□□□□□ -0.44
SMPD4-215ENST00000457039 H3BN98 237 aa12.33□□□□□ -0.44
SMPD4-215ENST00000457039 MITFO75030 526 aaPredicted RBP12.33□□□□□ -0.44
SMPD4-215ENST00000457039 WNT11O96014 354 aa12.33□□□□□ -0.44
SMPD4-215ENST00000457039 PAX7P23759 505 aa12.33□□□□□ -0.44
SMPD4-215ENST00000457039 NOS3P29474 1203 aa12.33□□□□□ -0.44
SMPD4-215ENST00000457039 GIPRP48546 466 aa12.33□□□□□ -0.44
SMPD4-215ENST00000457039 UBE2NP61088 152 aaKnown RBP12.33□□□□□ -0.44
SMPD4-215ENST00000457039 TUBA1BP68363 451 aa12.33□□□□□ -0.44
SMPD4-215ENST00000457039 TUBA4AP68366 448 aa12.33□□□□□ -0.44
SMPD4-215ENST00000457039 CDK5Q00535 292 aa12.33□□□□□ -0.44
SMPD4-215ENST00000457039 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.33□□□□□ -0.44
SMPD4-215ENST00000457039 PGGHGQ32M88 737 aa12.33□□□□□ -0.44
SMPD4-215ENST00000457039 SLC35F1Q5T1Q4 408 aa12.33□□□□□ -0.44
SMPD4-215ENST00000457039 NCMAPQ5T1S8 102 aa12.33□□□□□ -0.44
SMPD4-215ENST00000457039 ALKBH2Q6NS38 261 aa12.33□□□□□ -0.44
SMPD4-215ENST00000457039 ACSM5Q6NUN0 579 aa12.33□□□□□ -0.44
SMPD4-215ENST00000457039 LEG1Q6P5S2 330 aa12.33□□□□□ -0.44
SMPD4-215ENST00000457039 TUBA1AQ71U36 451 aa12.33□□□□□ -0.44
SMPD4-215ENST00000457039 JAZF1Q86VZ6 243 aa12.33□□□□□ -0.44
SMPD4-215ENST00000457039 SKA3Q8IX90 412 aa12.33□□□□□ -0.44
SMPD4-215ENST00000457039 PQLC1Q8N2U9 271 aa12.33□□□□□ -0.44
SMPD4-215ENST00000457039 IQCF1Q8N6M8 205 aa12.33□□□□□ -0.44
SMPD4-215ENST00000457039 FAM169BQ8N8A8 192 aa12.33□□□□□ -0.44
SMPD4-215ENST00000457039 SDR9C7Q8NEX9 313 aa12.33□□□□□ -0.44
SMPD4-215ENST00000457039 OR52E2Q8NGJ4 325 aa12.33□□□□□ -0.44
SMPD4-215ENST00000457039 HTRA1Q92743 480 aa12.33□□□□□ -0.44
SMPD4-215ENST00000457039 PIK3IP1Q96FE7 263 aa12.33□□□□□ -0.44
SMPD4-215ENST00000457039 PLPPR2Q96GM1 343 aa12.33□□□□□ -0.44
SMPD4-215ENST00000457039 ZNF75AQ96N20 296 aa12.33□□□□□ -0.44
SMPD4-215ENST00000457039 HS3ST6Q96QI5 342 aa12.33□□□□□ -0.44
SMPD4-215ENST00000457039 TMEM204Q9BSN7 226 aa12.33□□□□□ -0.44
SMPD4-215ENST00000457039 OSBPL10Q9BXB5 764 aa12.33□□□□□ -0.44
SMPD4-215ENST00000457039 NUAK2Q9H093 628 aa12.33□□□□□ -0.44
SMPD4-215ENST00000457039 NOX3Q9HBY0 568 aa12.33□□□□□ -0.44
SMPD4-215ENST00000457039 NGBQ9NPG2 151 aa12.33□□□□□ -0.44
SMPD4-215ENST00000457039 CRNNQ9UBG3 495 aaPredicted RBP12.33□□□□□ -0.44
SMPD4-215ENST00000457039 APCP25054 2843 aa12.33□□□□□ -0.44
SMPD4-215ENST00000457039 DCTN6O00399 190 aa12.32□□□□□ -0.44
SMPD4-215ENST00000457039 MGRN1O60291 552 aa12.32□□□□□ -0.44
SMPD4-215ENST00000457039 SLC16A7O60669 478 aa12.32□□□□□ -0.44
SMPD4-215ENST00000457039 IGKV3-15P01624 115 aa12.32□□□□□ -0.44
SMPD4-215ENST00000457039 IGLV1-44P01699 117 aa12.32□□□□□ -0.44
SMPD4-215ENST00000457039 HLA-HP01893 362 aa12.32□□□□□ -0.44
SMPD4-215ENST00000457039 OR8G3PP0DMU2 310 aa12.32□□□□□ -0.44
SMPD4-215ENST00000457039 NPR2P20594 1047 aa12.32□□□□□ -0.44
SMPD4-215ENST00000457039 CDAP32320 146 aa12.32□□□□□ -0.44
SMPD4-215ENST00000457039 GRK5P34947 590 aa12.32□□□□□ -0.44
SMPD4-215ENST00000457039 CRISP1P54107 249 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms