RNA–Protein interactions for RNA: ENST00000456948.5

CBX3-204, Transcript of chromobox 3, humanhuman

TSL 5

Gene CBX3, Length 1,068 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-204ENST00000456948 CD14P08571 375 aa20.13■□□□□ 0.81
CBX3-204ENST00000456948 SERPINF1P36955 418 aa20.13■□□□□ 0.81
CBX3-204ENST00000456948 GIPRP48546 466 aa20.13■□□□□ 0.81
CBX3-204ENST00000456948 SNRPD2P62316 118 aaKnown RBP20.13■□□□□ 0.81
CBX3-204ENST00000456948 MYBPC1Q00872 1141 aa20.13■□□□□ 0.81
CBX3-204ENST00000456948 GALK2Q01415 458 aa20.13■□□□□ 0.81
CBX3-204ENST00000456948 PLP2Q04941 152 aa20.13■□□□□ 0.81
CBX3-204ENST00000456948 RUNX1T1Q06455 604 aa20.13■□□□□ 0.81
CBX3-204ENST00000456948 C10orf128Q5T292 105 aa20.13■□□□□ 0.81
CBX3-204ENST00000456948 B3GLCTQ6Y288 498 aa20.13■□□□□ 0.81
CBX3-204ENST00000456948 MEX3DQ86XN8 651 aaKnown RBP20.13■□□□□ 0.81
CBX3-204ENST00000456948 SKA3Q8IX90 412 aa20.13■□□□□ 0.81
CBX3-204ENST00000456948 ARIH2OSQ8N7S6 290 aa20.13■□□□□ 0.81
CBX3-204ENST00000456948 NUP37Q8NFH4 326 aa20.13■□□□□ 0.81
CBX3-204ENST00000456948 KCNK17Q96T54 332 aa20.13■□□□□ 0.81
CBX3-204ENST00000456948 CACNG6Q9BXT2 260 aa20.13■□□□□ 0.81
CBX3-204ENST00000456948 TRIM15Q9C019 465 aa20.13■□□□□ 0.81
CBX3-204ENST00000456948 C1orf198Q9H425 327 aa20.13■□□□□ 0.81
CBX3-204ENST00000456948 SIAEQ9HAT2 523 aa20.13■□□□□ 0.81
CBX3-204ENST00000456948 TRBV4-1A0A0J9YWV2 114 aa20.12■□□□□ 0.81
CBX3-204ENST00000456948 SH3PXD2BA1X283 911 aa20.12■□□□□ 0.81
CBX3-204ENST00000456948 FAM171A2A8MVW0 826 aa20.12■□□□□ 0.81
CBX3-204ENST00000456948 OR10H3O60404 316 aa20.12■□□□□ 0.81
CBX3-204ENST00000456948 T-ENOLP0DO92 83 aa20.12■□□□□ 0.81
CBX3-204ENST00000456948 FUT4P22083 530 aa20.12■□□□□ 0.81
CBX3-204ENST00000456948 ZNF133P52736 654 aaPredicted RBP20.12■□□□□ 0.81
CBX3-204ENST00000456948 DNAL1Q4LDG9 190 aa20.12■□□□□ 0.81
CBX3-204ENST00000456948 FAM98BQ52LJ0 330 aaKnown RBP20.12■□□□□ 0.81
CBX3-204ENST00000456948 GPR139Q6DWJ6 353 aa20.12■□□□□ 0.81
CBX3-204ENST00000456948 IGFN1Q86VF2 1251 aa20.12■□□□□ 0.81
CBX3-204ENST00000456948 LINC00471Q8N535 108 aa20.12■□□□□ 0.81
CBX3-204ENST00000456948 LRRC75AQ8NAA5 344 aa20.12■□□□□ 0.81
CBX3-204ENST00000456948 HDAC2Q92769 488 aaKnown RBP20.12■□□□□ 0.81
CBX3-204ENST00000456948 C18orf12Q96KH6 178 aa20.12■□□□□ 0.81
CBX3-204ENST00000456948 LRMDAQ9H2I8 198 aa20.12■□□□□ 0.81
CBX3-204ENST00000456948 MAGIXQ9H6Y5 334 aa20.12■□□□□ 0.81
CBX3-204ENST00000456948 TAS2R1Q9NYW7 299 aa20.12■□□□□ 0.81
CBX3-204ENST00000456948 UNC119BA6NIH7 251 aa20.11■□□□□ 0.81
CBX3-204ENST00000456948 B9A039 149 aa20.11■□□□□ 0.81
CBX3-204ENST00000456948 CDC42EP2O14613 210 aa20.11■□□□□ 0.81
CBX3-204ENST00000456948 GYG2O15488 501 aa20.11■□□□□ 0.81
CBX3-204ENST00000456948 SERPINA5P05154 406 aa20.11■□□□□ 0.81
CBX3-204ENST00000456948 RRM2P31350 389 aa20.11■□□□□ 0.81
CBX3-204ENST00000456948 OMPP47874 163 aa20.11■□□□□ 0.81
CBX3-204ENST00000456948 ERVK-25P63136 954 aa20.11■□□□□ 0.81
CBX3-204ENST00000456948 MRPS34P82930 218 aaKnown RBP20.11■□□□□ 0.81
CBX3-204ENST00000456948 DAG1Q14118 895 aa20.11■□□□□ 0.81
CBX3-204ENST00000456948 LCN8Q6JVE9 175 aa20.11■□□□□ 0.81
CBX3-204ENST00000456948 VHLLQ6RSH7 139 aa20.11■□□□□ 0.81
CBX3-204ENST00000456948 KRTAP1-3Q8IUG1 177 aa20.11■□□□□ 0.81
CBX3-204ENST00000456948 OR1J2Q8NGS2 313 aa20.11■□□□□ 0.81
CBX3-204ENST00000456948 ASB9Q96DX5 294 aa20.11■□□□□ 0.81
CBX3-204ENST00000456948 FBXO17Q96EF6 278 aa20.11■□□□□ 0.81
CBX3-204ENST00000456948 RSRC1Q96IZ7 334 aaKnown RBP20.11■□□□□ 0.81
CBX3-204ENST00000456948 TSPAN32Q96QS1 320 aa20.11■□□□□ 0.81
CBX3-204ENST00000456948 SH3GL3Q99963 347 aa20.11■□□□□ 0.81
CBX3-204ENST00000456948 THTPAQ9BU02 230 aa20.11■□□□□ 0.81
CBX3-204ENST00000456948 ZNF442Q9H7R0 627 aa20.11■□□□□ 0.81
CBX3-204ENST00000456948 CCNB1IP1Q9NPC3 277 aa20.11■□□□□ 0.81
CBX3-204ENST00000456948 IGHV2OR16-5A0A0B4J2B6 119 aa20.1■□□□□ 0.81
CBX3-204ENST00000456948 IQCMA0A1B0GVH7 501 aa20.1■□□□□ 0.81
CBX3-204ENST00000456948 ZNF503-AS2A6NEH8 195 aa20.1■□□□□ 0.81
CBX3-204ENST00000456948 CELA3BP08861 270 aa20.1■□□□□ 0.81
CBX3-204ENST00000456948 HOXB6P17509 224 aaKnown RBP20.1■□□□□ 0.81
CBX3-204ENST00000456948 RPS6KA3P51812 740 aa20.1■□□□□ 0.81
CBX3-204ENST00000456948 CLEC12BQ2HXU8 276 aa20.1■□□□□ 0.81
CBX3-204ENST00000456948 NSMAFQ92636 917 aa20.1■□□□□ 0.81
CBX3-204ENST00000456948 ZNF570Q96NI8 536 aa20.1■□□□□ 0.81
CBX3-204ENST00000456948 SIGLEC7Q9Y286 467 aa20.1■□□□□ 0.81
CBX3-204ENST00000456948 SLC22A23A1A5C7 686 aa20.09■□□□□ 0.81
CBX3-204ENST00000456948 PTP4A3O75365 173 aa20.09■□□□□ 0.81
CBX3-204ENST00000456948 SLC2A10O95528 541 aa20.09■□□□□ 0.81
CBX3-204ENST00000456948 OR4A8P0C604 315 aa20.09■□□□□ 0.81
CBX3-204ENST00000456948 ZNF14P17017 642 aaPredicted RBP20.09■□□□□ 0.81
CBX3-204ENST00000456948 CALCRP30988 508 aa20.09■□□□□ 0.81
CBX3-204ENST00000456948 LIMS1P48059 325 aa20.09■□□□□ 0.81
CBX3-204ENST00000456948 RPS23P62266 143 aaKnown RBP20.09■□□□□ 0.81
CBX3-204ENST00000456948 TRAP1Q12931 704 aaKnown RBP20.09■□□□□ 0.81
CBX3-204ENST00000456948 SEC23BQ15437 767 aa20.09■□□□□ 0.81
CBX3-204ENST00000456948 SGCAQ16586 387 aa20.09■□□□□ 0.81
CBX3-204ENST00000456948 IQCCQ4KMZ1 466 aa20.09■□□□□ 0.81
CBX3-204ENST00000456948 C11orf71Q6IPW1 123 aa20.09■□□□□ 0.81
CBX3-204ENST00000456948 SMARCD3Q6STE5 483 aa20.09■□□□□ 0.81
CBX3-204ENST00000456948 DPY19L2P2Q6ZN68 376 aa20.09■□□□□ 0.81
CBX3-204ENST00000456948 BIVMQ86UB2 503 aa20.09■□□□□ 0.81
CBX3-204ENST00000456948 LRRC18Q8N456 261 aa20.09■□□□□ 0.81
CBX3-204ENST00000456948 ZNF519Q8TB69 540 aa20.09■□□□□ 0.81
CBX3-204ENST00000456948 SEC61A2Q9H9S3 476 aa20.09■□□□□ 0.81
CBX3-204ENST00000456948 H7C417 338 aa20.08■□□□□ 0.81
CBX3-204ENST00000456948 ERCC1P07992 297 aaPredicted RBP20.08■□□□□ 0.81
CBX3-204ENST00000456948 INHBBP09529 407 aa20.08■□□□□ 0.81
CBX3-204ENST00000456948 ATP6V1B2P21281 511 aa20.08■□□□□ 0.81
CBX3-204ENST00000456948 NR4A1P22736 598 aa20.08■□□□□ 0.81
CBX3-204ENST00000456948 NUDT6P53370 316 aa20.08■□□□□ 0.81
CBX3-204ENST00000456948 DSCR9P59020 149 aa20.08■□□□□ 0.81
CBX3-204ENST00000456948 PCBD1P61457 104 aa20.08■□□□□ 0.81
CBX3-204ENST00000456948 HSF2Q03933 536 aa20.08■□□□□ 0.81
CBX3-204ENST00000456948 FHL1Q13642 323 aa20.08■□□□□ 0.81
CBX3-204ENST00000456948 RAB39AQ14964 217 aa20.08■□□□□ 0.81
CBX3-204ENST00000456948 SLC25A47Q6Q0C1 308 aa20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms