RNA–Protein interactions for RNA: ENST00000456385.5

CLIP4-208, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 2

Gene CLIP4, Length 2,311 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-208ENST00000456385 EDARADDQ8WWZ3 215 aa9.35□□□□□ -0.91
CLIP4-208ENST00000456385 ARL11Q969Q4 196 aa9.35□□□□□ -0.91
CLIP4-208ENST00000456385 MICU1Q9BPX6 476 aa9.35□□□□□ -0.91
CLIP4-208ENST00000456385 SLC25A21Q9BQT8 299 aaPredicted RBP9.35□□□□□ -0.91
CLIP4-208ENST00000456385 ZNF251Q9BRH9 671 aa9.35□□□□□ -0.91
CLIP4-208ENST00000456385 SEC11CQ9BY50 192 aa9.35□□□□□ -0.91
CLIP4-208ENST00000456385 SRA1Q9HD15 236 aaKnown RBP9.35□□□□□ -0.91
CLIP4-208ENST00000456385 SHPKQ9UHJ6 478 aa9.35□□□□□ -0.91
CLIP4-208ENST00000456385 MSRAQ9UJ68 235 aa9.35□□□□□ -0.91
CLIP4-208ENST00000456385 C19orf53Q9UNZ5 99 aaPredicted RBP9.35□□□□□ -0.91
CLIP4-208ENST00000456385 TICRRQ7Z2Z1 1910 aa9.35□□□□□ -0.91
CLIP4-208ENST00000456385 TRBV5-7A0A0A0MS05 114 aa9.34□□□□□ -0.91
CLIP4-208ENST00000456385 A0A1W2PPE3 182 aa9.34□□□□□ -0.91
CLIP4-208ENST00000456385 IGLON5A6NGN9 336 aa9.34□□□□□ -0.91
CLIP4-208ENST00000456385 C5orf52A6NGY3 159 aa9.34□□□□□ -0.91
CLIP4-208ENST00000456385 PRRT4C9JH25 899 aa9.34□□□□□ -0.91
CLIP4-208ENST00000456385 BLOC1S5-TXNDC5H3BN57 136 aa9.34□□□□□ -0.91
CLIP4-208ENST00000456385 H7C1C5 153 aa9.34□□□□□ -0.91
CLIP4-208ENST00000456385 SRPX2O60687 465 aaPredicted RBP9.34□□□□□ -0.91
CLIP4-208ENST00000456385 ABHD16AO95870 558 aa9.34□□□□□ -0.91
CLIP4-208ENST00000456385 MELTFP08582 738 aa9.34□□□□□ -0.91
CLIP4-208ENST00000456385 SMIM6P0DI80 62 aa9.34□□□□□ -0.91
CLIP4-208ENST00000456385 CCKBRP32239 447 aa9.34□□□□□ -0.91
CLIP4-208ENST00000456385 PBX2P40425 430 aa9.34□□□□□ -0.91
CLIP4-208ENST00000456385 PPT1P50897 306 aa9.34□□□□□ -0.91
CLIP4-208ENST00000456385 LCN6P62502 163 aa9.34□□□□□ -0.91
CLIP4-208ENST00000456385 SRSF4Q08170 494 aaKnown RBP9.34□□□□□ -0.91
CLIP4-208ENST00000456385 SREBF2Q12772 1141 aa9.34□□□□□ -0.91
CLIP4-208ENST00000456385 PPP1R1AQ13522 171 aa9.34□□□□□ -0.91
CLIP4-208ENST00000456385 PEA15Q15121 130 aa9.34□□□□□ -0.91
CLIP4-208ENST00000456385 SLC35D3Q5M8T2 416 aa9.34□□□□□ -0.91
CLIP4-208ENST00000456385 NKAPLQ5M9Q1 402 aa9.34□□□□□ -0.91
CLIP4-208ENST00000456385 DPY19L2P2Q6ZN68 376 aa9.34□□□□□ -0.91
CLIP4-208ENST00000456385 KCTD9Q7L273 389 aa9.34□□□□□ -0.91
CLIP4-208ENST00000456385 SLC29A4Q7RTT9 530 aa9.34□□□□□ -0.91
CLIP4-208ENST00000456385 BPIFB2Q8N4F0 458 aa9.34□□□□□ -0.91
CLIP4-208ENST00000456385 PAQR4Q8N4S7 273 aaPredicted RBP9.34□□□□□ -0.91
CLIP4-208ENST00000456385 MFSD9Q8NBP5 474 aa9.34□□□□□ -0.91
CLIP4-208ENST00000456385 OR4N2Q8NGD1 307 aa9.34□□□□□ -0.91
CLIP4-208ENST00000456385 OR2L8Q8NGY9 312 aa9.34□□□□□ -0.91
CLIP4-208ENST00000456385 OR2G2Q8NGZ5 317 aa9.34□□□□□ -0.91
CLIP4-208ENST00000456385 EDAQ92838 391 aa9.34□□□□□ -0.91
CLIP4-208ENST00000456385 SMARCD2Q92925 531 aa9.34□□□□□ -0.91
CLIP4-208ENST00000456385 ZNF558Q96NG5 402 aa9.34□□□□□ -0.91
CLIP4-208ENST00000456385 CST11Q9H112 138 aa9.34□□□□□ -0.91
CLIP4-208ENST00000456385 HRH4Q9H3N8 390 aa9.34□□□□□ -0.91
CLIP4-208ENST00000456385 SEMA6CQ9H3T2 930 aa9.34□□□□□ -0.91
CLIP4-208ENST00000456385 MBNL1Q9NR56 388 aaKnown RBP9.34□□□□□ -0.91
CLIP4-208ENST00000456385 TMEM100Q9NV29 134 aa9.34□□□□□ -0.91
CLIP4-208ENST00000456385 MIOXQ9UGB7 285 aa9.34□□□□□ -0.91
CLIP4-208ENST00000456385 RANBP2P49792 3224 aaKnown RBP9.34□□□□□ -0.91
CLIP4-208ENST00000456385 C1QTNF3-AMACRE9PGA6 284 aa9.34□□□□□ -0.91
CLIP4-208ENST00000456385 ZNF208O43345 1280 aa9.34□□□□□ -0.91
CLIP4-208ENST00000456385 S100A9P06702 114 aaKnown RBP9.34□□□□□ -0.91
CLIP4-208ENST00000456385 HEXAP06865 529 aa9.34□□□□□ -0.91
CLIP4-208ENST00000456385 CT62P0C5K7 136 aa9.34□□□□□ -0.91
CLIP4-208ENST00000456385 ZNF44P15621 663 aa9.34□□□□□ -0.91
CLIP4-208ENST00000456385 ST6GAL1P15907 406 aa9.34□□□□□ -0.91
CLIP4-208ENST00000456385 MUC1P15941 1255 aaPredicted RBP9.34□□□□□ -0.91
CLIP4-208ENST00000456385 GPR143P51810 404 aa9.34□□□□□ -0.91
CLIP4-208ENST00000456385 ACTBP60709 375 aa9.34□□□□□ -0.91
CLIP4-208ENST00000456385 ACTG1P63261 375 aa9.34□□□□□ -0.91
CLIP4-208ENST00000456385 MST1LQ2TV78 715 aa9.34□□□□□ -0.91
CLIP4-208ENST00000456385 LINC00114Q6XXX2 140 aa9.34□□□□□ -0.91
CLIP4-208ENST00000456385 ZNF704Q6ZNC4 412 aaPredicted RBP9.34□□□□□ -0.91
CLIP4-208ENST00000456385 TMPPEQ6ZT21 453 aa9.34□□□□□ -0.91
CLIP4-208ENST00000456385 NAA40Q86UY6 237 aa9.34□□□□□ -0.91
CLIP4-208ENST00000456385 MISPQ8IVT2 679 aa9.34□□□□□ -0.91
CLIP4-208ENST00000456385 ZNF417Q8TAU3 575 aa9.34□□□□□ -0.91
CLIP4-208ENST00000456385 NUBPLQ8TB37 319 aa9.34□□□□□ -0.91
CLIP4-208ENST00000456385 ELP5Q8TE02 316 aa9.34□□□□□ -0.91
CLIP4-208ENST00000456385 CASTOR1Q8WTX7 329 aa9.34□□□□□ -0.91
CLIP4-208ENST00000456385 PPP1R14AQ96A00 147 aa9.34□□□□□ -0.91
CLIP4-208ENST00000456385 RNF186Q9NXI6 227 aa9.34□□□□□ -0.91
CLIP4-208ENST00000456385 DNAJB12Q9NXW2 375 aaKnown RBP9.34□□□□□ -0.91
CLIP4-208ENST00000456385 NOSIPQ9Y314 301 aaKnown RBP9.34□□□□□ -0.91
CLIP4-208ENST00000456385 TMED7Q9Y3B3 224 aa9.34□□□□□ -0.91
CLIP4-208ENST00000456385 SZT2Q5T011 3432 aa9.34□□□□□ -0.91
CLIP4-208ENST00000456385 THSD7BQ9C0I4 1608 aa9.34□□□□□ -0.91
CLIP4-208ENST00000456385 LOC100289279A0A1B0GTE1 492 aa9.33□□□□□ -0.92
CLIP4-208ENST00000456385 FITM1A5D6W6 292 aa9.33□□□□□ -0.92
CLIP4-208ENST00000456385 ELOA3DA6NLF2 546 aaPredicted RBP9.33□□□□□ -0.92
CLIP4-208ENST00000456385 GRXCR1A8MXD5 290 aa9.33□□□□□ -0.92
CLIP4-208ENST00000456385 ZNF736B4DX44 427 aaPredicted RBP9.33□□□□□ -0.92
CLIP4-208ENST00000456385 CDC40O60508 579 aaKnown RBP eCLIP9.33□□□□□ -0.92
CLIP4-208ENST00000456385 CD74P04233 296 aa9.33□□□□□ -0.92
CLIP4-208ENST00000456385 CISD3P0C7P0 127 aa9.33□□□□□ -0.92
CLIP4-208ENST00000456385 FAM157CP0CG43 387 aa9.33□□□□□ -0.92
CLIP4-208ENST00000456385 SDHAP31040 664 aa9.33□□□□□ -0.92
CLIP4-208ENST00000456385 RBM34P42696 430 aaKnown RBP9.33□□□□□ -0.92
CLIP4-208ENST00000456385 TSFMP43897 325 aaKnown RBP9.33□□□□□ -0.92
CLIP4-208ENST00000456385 RAB5BP61020 215 aa9.33□□□□□ -0.92
CLIP4-208ENST00000456385 DMWDQ09019 674 aa9.33□□□□□ -0.92
CLIP4-208ENST00000456385 TGIF1Q15583 401 aa9.33□□□□□ -0.92
CLIP4-208ENST00000456385 ELAVL1Q15717 326 aaKnown RBP9.33□□□□□ -0.92
CLIP4-208ENST00000456385 EIF2S3LQ2VIR3 472 aaKnown RBP9.33□□□□□ -0.92
CLIP4-208ENST00000456385 ELOA3BQ3SY89 546 aa9.33□□□□□ -0.92
CLIP4-208ENST00000456385 MOGAT2Q3SYC2 334 aa9.33□□□□□ -0.92
CLIP4-208ENST00000456385 ASPHD2Q6ICH7 369 aa9.33□□□□□ -0.92
CLIP4-208ENST00000456385 OR10K2Q6IF99 312 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms