RNA–Protein interactions for RNA: ENST00000455883.2

CSMD3-204, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 12,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-204ENST00000455883 CLCNKBP51801 687 aa4.83□□□□□ -1.64
CSMD3-204ENST00000455883 SLC10A1Q14973 349 aa4.83□□□□□ -1.64
CSMD3-204ENST00000455883 SOWAHAQ2M3V2 549 aa4.83□□□□□ -1.64
CSMD3-204ENST00000455883 LHFPL5Q8TAF8 219 aa4.83□□□□□ -1.64
CSMD3-204ENST00000455883 UBXN10Q96LJ8 280 aa4.83□□□□□ -1.64
CSMD3-204ENST00000455883 ZNF582Q96NG8 517 aaPredicted RBP4.83□□□□□ -1.64
CSMD3-204ENST00000455883 LRFN3Q9BTN0 628 aa4.83□□□□□ -1.64
CSMD3-204ENST00000455883 ALG12Q9BV10 488 aa4.83□□□□□ -1.64
CSMD3-204ENST00000455883 LRP3O75074 770 aa4.83□□□□□ -1.64
CSMD3-204ENST00000455883 ACKR3P25106 362 aa4.83□□□□□ -1.64
CSMD3-204ENST00000455883 APLNRP35414 380 aa4.83□□□□□ -1.64
CSMD3-204ENST00000455883 SLC6A11P48066 632 aa4.83□□□□□ -1.64
CSMD3-204ENST00000455883 FOXO1Q12778 655 aa4.83□□□□□ -1.64
CSMD3-204ENST00000455883 PDZK1IP1Q13113 114 aa4.83□□□□□ -1.64
CSMD3-204ENST00000455883 CEACAM7Q14002 265 aa4.83□□□□□ -1.64
CSMD3-204ENST00000455883 TMEM30BQ3MIR4 351 aa4.83□□□□□ -1.64
CSMD3-204ENST00000455883 STEAP3Q658P3 488 aa4.83□□□□□ -1.64
CSMD3-204ENST00000455883 PLXDC2Q6UX71 529 aa4.83□□□□□ -1.64
CSMD3-204ENST00000455883 CD300LDQ6UXZ3 194 aa4.83□□□□□ -1.64
CSMD3-204ENST00000455883 GPR152Q8TDT2 470 aa4.83□□□□□ -1.64
CSMD3-204ENST00000455883 DIRC2Q96SL1 478 aa4.83□□□□□ -1.64
CSMD3-204ENST00000455883 PKMYT1Q99640 499 aa4.83□□□□□ -1.64
CSMD3-204ENST00000455883 SLC25A19Q9HC21 320 aa4.83□□□□□ -1.64
CSMD3-204ENST00000455883 C14orf119Q9NWQ9 140 aa4.83□□□□□ -1.64
CSMD3-204ENST00000455883 MED16Q9Y2X0 877 aa4.83□□□□□ -1.64
CSMD3-204ENST00000455883 LOC730098B7Z3J9 87 aa4.83□□□□□ -1.64
CSMD3-204ENST00000455883 NME4O00746 187 aa4.83□□□□□ -1.64
CSMD3-204ENST00000455883 SIX3O95343 332 aaPredicted RBP4.83□□□□□ -1.64
CSMD3-204ENST00000455883 PPP1R17O96001 155 aa4.83□□□□□ -1.64
CSMD3-204ENST00000455883 CD99P14209 185 aa4.83□□□□□ -1.64
CSMD3-204ENST00000455883 ZNF26P17031 533 aaPredicted RBP4.83□□□□□ -1.64
CSMD3-204ENST00000455883 RPL29P47914 159 aaKnown RBP4.83□□□□□ -1.64
CSMD3-204ENST00000455883 CLDN6P56747 220 aa4.83□□□□□ -1.64
CSMD3-204ENST00000455883 NAAAQ02083 359 aa4.83□□□□□ -1.64
CSMD3-204ENST00000455883 TARBP2Q15633 366 aaKnown RBP4.83□□□□□ -1.64
CSMD3-204ENST00000455883 TMEM201Q5SNT2 666 aa4.83□□□□□ -1.64
CSMD3-204ENST00000455883 SLC25A30Q5SVS4 291 aa4.83□□□□□ -1.64
CSMD3-204ENST00000455883 FOXRED2Q8IWF2 684 aa4.83□□□□□ -1.64
CSMD3-204ENST00000455883 BAP18Q8IXM2 172 aa4.83□□□□□ -1.64
CSMD3-204ENST00000455883 CCDC116Q8IYX3 515 aa4.83□□□□□ -1.64
CSMD3-204ENST00000455883 OR8U1Q8NH10 309 aa4.83□□□□□ -1.64
CSMD3-204ENST00000455883 JOSD2Q8TAC2 188 aa4.83□□□□□ -1.64
CSMD3-204ENST00000455883 LMLNQ96KR4 655 aa4.83□□□□□ -1.64
CSMD3-204ENST00000455883 HSPB8Q9UJY1 196 aa4.83□□□□□ -1.64
CSMD3-204ENST00000455883 TBX21Q9UL17 535 aa4.83□□□□□ -1.64
CSMD3-204ENST00000455883 OBSL1O75147 1896 aa4.83□□□□□ -1.64
CSMD3-204ENST00000455883 ENDOD1O94919 500 aa4.83□□□□□ -1.64
CSMD3-204ENST00000455883 ZNF280AP59817 542 aaPredicted RBP4.83□□□□□ -1.64
CSMD3-204ENST00000455883 SPCS3P61009 180 aa4.83□□□□□ -1.64
CSMD3-204ENST00000455883 RBPJQ06330 500 aa4.83□□□□□ -1.64
CSMD3-204ENST00000455883 TMEM19Q96HH6 336 aa4.83□□□□□ -1.64
CSMD3-204ENST00000455883 SORT1Q99523 831 aa4.83□□□□□ -1.64
CSMD3-204ENST00000455883 RHBGQ9H310 441 aa4.83□□□□□ -1.64
CSMD3-204ENST00000455883 ZNF814B7Z6K7 855 aa4.83□□□□□ -1.64
CSMD3-204ENST00000455883 YY2O15391 372 aa4.83□□□□□ -1.64
CSMD3-204ENST00000455883 LEFTY1O75610 366 aa4.83□□□□□ -1.64
CSMD3-204ENST00000455883 EIF4EP06730 217 aaKnown RBP4.83□□□□□ -1.64
CSMD3-204ENST00000455883 RRASP10301 218 aa4.83□□□□□ -1.64
CSMD3-204ENST00000455883 TNFSF8P32971 234 aa4.83□□□□□ -1.64
CSMD3-204ENST00000455883 SGSHP51688 502 aa4.83□□□□□ -1.64
CSMD3-204ENST00000455883 RAB38P57729 211 aa4.83□□□□□ -1.64
CSMD3-204ENST00000455883 SLC35A2P78381 396 aa4.83□□□□□ -1.64
CSMD3-204ENST00000455883 IHHQ14623 411 aa4.83□□□□□ -1.64
CSMD3-204ENST00000455883 LY6KQ17RY6 165 aa4.83□□□□□ -1.64
CSMD3-204ENST00000455883 GFOD2Q3B7J2 385 aa4.83□□□□□ -1.64
CSMD3-204ENST00000455883 TRNP1Q6NT89 227 aa4.83□□□□□ -1.64
CSMD3-204ENST00000455883 PARGQ86W56 976 aa4.83□□□□□ -1.64
CSMD3-204ENST00000455883 FIBINQ8TAL6 211 aa4.83□□□□□ -1.64
CSMD3-204ENST00000455883 NXPE3Q969Y0 559 aa4.83□□□□□ -1.64
CSMD3-204ENST00000455883 SCLYQ96I15 445 aa4.83□□□□□ -1.64
CSMD3-204ENST00000455883 FAAP24Q9BTP7 215 aa4.83□□□□□ -1.64
CSMD3-204ENST00000455883 TMPRSS13Q9BYE2 586 aa4.83□□□□□ -1.64
CSMD3-204ENST00000455883 ENKD1Q9H0I2 346 aa4.83□□□□□ -1.64
CSMD3-204ENST00000455883 EHFQ9NZC4 300 aa4.83□□□□□ -1.64
CSMD3-204ENST00000455883 DSCAMO60469 2012 aa4.83□□□□□ -1.64
CSMD3-204ENST00000455883 POM121CA8CG34 1229 aa4.83□□□□□ -1.64
CSMD3-204ENST00000455883 TFPTP0C1Z6 253 aa4.83□□□□□ -1.64
CSMD3-204ENST00000455883 CBLP22681 906 aa4.83□□□□□ -1.64
CSMD3-204ENST00000455883 GDNFP39905 211 aa4.83□□□□□ -1.64
CSMD3-204ENST00000455883 NAA10P41227 235 aaPredicted RBP4.83□□□□□ -1.64
CSMD3-204ENST00000455883 FHITP49789 147 aa4.83□□□□□ -1.64
CSMD3-204ENST00000455883 IGFBP7Q16270 282 aa4.83□□□□□ -1.64
CSMD3-204ENST00000455883 KCTD11Q693B1 232 aa4.83□□□□□ -1.64
CSMD3-204ENST00000455883 POMZP3Q6PJE2 187 aa4.83□□□□□ -1.64
CSMD3-204ENST00000455883 PQLC3Q8N755 202 aa4.83□□□□□ -1.64
CSMD3-204ENST00000455883 FKRPQ9H9S5 495 aa4.83□□□□□ -1.64
CSMD3-204ENST00000455883 TM7SF3Q9NS93 570 aa4.83□□□□□ -1.64
CSMD3-204ENST00000455883 N6AMT1Q9Y5N5 214 aa4.83□□□□□ -1.64
CSMD3-204ENST00000455883 FN1P02751 2386 aaKnown RBP4.83□□□□□ -1.64
CSMD3-204ENST00000455883 PIRO00625 290 aa4.82□□□□□ -1.64
CSMD3-204ENST00000455883 XRCC3O43542 346 aa4.82□□□□□ -1.64
CSMD3-204ENST00000455883 IL33O95760 270 aa4.82□□□□□ -1.64
CSMD3-204ENST00000455883 WNT11O96014 354 aa4.82□□□□□ -1.64
CSMD3-204ENST00000455883 P04436 131 aa4.82□□□□□ -1.64
CSMD3-204ENST00000455883 PTGER4P35408 488 aa4.82□□□□□ -1.64
CSMD3-204ENST00000455883 G6PCP35575 357 aa4.82□□□□□ -1.64
CSMD3-204ENST00000455883 FABP6P51161 128 aa4.82□□□□□ -1.64
CSMD3-204ENST00000455883 OR2B8PP59922 312 aa4.82□□□□□ -1.64
CSMD3-204ENST00000455883 RPS25P62851 125 aaKnown RBP4.82□□□□□ -1.64
CSMD3-204ENST00000455883 SP3Q02447 781 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms