RNA–Protein interactions for RNA: ENST00000455111.1

GPC1-206, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 841 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-206ENST00000455111 C17orf100A8MU93 164 aa13.68□□□□□ -0.22
GPC1-206ENST00000455111 BLOC1S5-TXNDC5H3BN57 136 aa13.68□□□□□ -0.22
GPC1-206ENST00000455111 DEAF1O75398 565 aaPredicted RBP13.68□□□□□ -0.22
GPC1-206ENST00000455111 OR7A10O76100 309 aa13.68□□□□□ -0.22
GPC1-206ENST00000455111 OR6A2O95222 327 aa13.68□□□□□ -0.22
GPC1-206ENST00000455111 MT-ND1P03886 318 aa13.68□□□□□ -0.22
GPC1-206ENST00000455111 GAAP10253 952 aa13.68□□□□□ -0.22
GPC1-206ENST00000455111 HNF1AP20823 631 aa13.68□□□□□ -0.22
GPC1-206ENST00000455111 WNT5AP41221 380 aa13.68□□□□□ -0.22
GPC1-206ENST00000455111 OR1E2P47887 323 aa13.68□□□□□ -0.22
GPC1-206ENST00000455111 C10orf128Q5T292 105 aa13.68□□□□□ -0.22
GPC1-206ENST00000455111 RGS7BPQ6MZT1 257 aaPredicted RBP13.68□□□□□ -0.22
GPC1-206ENST00000455111 NANOGNBQ7Z5D8 188 aa13.68□□□□□ -0.22
GPC1-206ENST00000455111 ZNF101Q8IZC7 436 aa13.68□□□□□ -0.22
GPC1-206ENST00000455111 LRRC18Q8N456 261 aa13.68□□□□□ -0.22
GPC1-206ENST00000455111 RFLNBQ8N5W9 214 aa13.68□□□□□ -0.22
GPC1-206ENST00000455111 DYDC1Q8WWB3 177 aa13.68□□□□□ -0.22
GPC1-206ENST00000455111 SH3GLB1Q9Y371 365 aa13.68□□□□□ -0.22
GPC1-206ENST00000455111 SPEF1Q9Y4P9 236 aa13.68□□□□□ -0.22
GPC1-206ENST00000455111 ARHGAP32A7KAX9 2087 aa13.68□□□□□ -0.22
GPC1-206ENST00000455111 LOC100509620A0A075B734 347 aa13.67□□□□□ -0.22
GPC1-206ENST00000455111 A0A0G2JND7 137 aa13.67□□□□□ -0.22
GPC1-206ENST00000455111 CDC14BO60729 498 aa13.67□□□□□ -0.22
GPC1-206ENST00000455111 SNAP29O95721 258 aa13.67□□□□□ -0.22
GPC1-206ENST00000455111 BCL10O95999 233 aa13.67□□□□□ -0.22
GPC1-206ENST00000455111 ERCC1P07992 297 aaPredicted RBP13.67□□□□□ -0.22
GPC1-206ENST00000455111 SAGP10523 405 aaPredicted RBP13.67□□□□□ -0.22
GPC1-206ENST00000455111 UMPSP11172 480 aa13.67□□□□□ -0.22
GPC1-206ENST00000455111 ACADSP16219 412 aa13.67□□□□□ -0.22
GPC1-206ENST00000455111 CCL8P80075 99 aa13.67□□□□□ -0.22
GPC1-206ENST00000455111 GALK2Q01415 458 aa13.67□□□□□ -0.22
GPC1-206ENST00000455111 SF3A3Q12874 501 aaKnown RBP eCLIP13.67□□□□□ -0.22
GPC1-206ENST00000455111 LAPTM4AQ15012 233 aa13.67□□□□□ -0.22
GPC1-206ENST00000455111 AVPI1Q5T686 147 aa13.67□□□□□ -0.22
GPC1-206ENST00000455111 SLC25A47Q6Q0C1 308 aa13.67□□□□□ -0.22
GPC1-206ENST00000455111 MEX3DQ86XN8 651 aaKnown RBP13.67□□□□□ -0.22
GPC1-206ENST00000455111 LRRC75AQ8NAA5 344 aa13.67□□□□□ -0.22
GPC1-206ENST00000455111 LIPHQ8WWY8 451 aa13.67□□□□□ -0.22
GPC1-206ENST00000455111 POM121L2Q96KW2 1035 aa13.67□□□□□ -0.22
GPC1-206ENST00000455111 TMEM120AQ9BXJ8 343 aa13.67□□□□□ -0.22
GPC1-206ENST00000455111 G6PC2Q9NQR9 355 aa13.67□□□□□ -0.22
GPC1-206ENST00000455111 HIF1ANQ9NWT6 349 aa13.67□□□□□ -0.22
GPC1-206ENST00000455111 RIMS3Q9UJD0 308 aa13.67□□□□□ -0.22
GPC1-206ENST00000455111 A0A1W2PPW3 197 aa13.66□□□□□ -0.22
GPC1-206ENST00000455111 B4DSR2 109 aa13.66□□□□□ -0.22
GPC1-206ENST00000455111 TCF21O43680 179 aa13.66□□□□□ -0.22
GPC1-206ENST00000455111 IGHG1P01857 330 aa13.66□□□□□ -0.22
GPC1-206ENST00000455111 SCG5P05408 212 aa13.66□□□□□ -0.22
GPC1-206ENST00000455111 ZNF32P17041 273 aa13.66□□□□□ -0.22
GPC1-206ENST00000455111 MPV17P39210 176 aa13.66□□□□□ -0.22
GPC1-206ENST00000455111 UCP2P55851 309 aa13.66□□□□□ -0.22
GPC1-206ENST00000455111 RPS23P62266 143 aaKnown RBP13.66□□□□□ -0.22
GPC1-206ENST00000455111 MRPS11P82912 194 aaKnown RBP13.66□□□□□ -0.22
GPC1-206ENST00000455111 GLO1Q04760 184 aa13.66□□□□□ -0.22
GPC1-206ENST00000455111 PABPC1L2AQ5JQF8 200 aa13.66□□□□□ -0.22
GPC1-206ENST00000455111 REP15Q6BDI9 236 aa13.66□□□□□ -0.22
GPC1-206ENST00000455111 SLC16A14Q7RTX9 510 aa13.66□□□□□ -0.22
GPC1-206ENST00000455111 SNX32Q86XE0 403 aa13.66□□□□□ -0.22
GPC1-206ENST00000455111 SLC30A8Q8IWU4 369 aa13.66□□□□□ -0.22
GPC1-206ENST00000455111 TMEM186Q96B77 213 aa13.66□□□□□ -0.22
GPC1-206ENST00000455111 LRRC58Q96CX6 371 aa13.66□□□□□ -0.22
GPC1-206ENST00000455111 HINT3Q9NQE9 182 aaKnown RBP13.66□□□□□ -0.22
GPC1-206ENST00000455111 MAN2C1Q9NTJ4 1040 aa13.66□□□□□ -0.22
GPC1-206ENST00000455111 FBXL3Q9UKT7 428 aa13.66□□□□□ -0.22
GPC1-206ENST00000455111 A4GNTQ9UNA3 340 aa13.66□□□□□ -0.22
GPC1-206ENST00000455111 SNX13Q9Y5W8 968 aa13.66□□□□□ -0.22
GPC1-206ENST00000455111 NBEAL1Q6ZS30 2694 aa13.66□□□□□ -0.22
GPC1-206ENST00000455111 HMGB1P1B2RPK0 211 aaPredicted RBP13.65□□□□□ -0.22
GPC1-206ENST00000455111 PPIHO43447 177 aaKnown RBP13.65□□□□□ -0.22
GPC1-206ENST00000455111 OR5F1O95221 314 aa13.65□□□□□ -0.22
GPC1-206ENST00000455111 IGF2P01344 180 aa13.65□□□□□ -0.22
GPC1-206ENST00000455111 MSMBP08118 114 aa13.65□□□□□ -0.22
GPC1-206ENST00000455111 MAKP20794 623 aa13.65□□□□□ -0.22
GPC1-206ENST00000455111 MMP15P51511 669 aa13.65□□□□□ -0.22
GPC1-206ENST00000455111 TMEM33P57088 247 aa13.65□□□□□ -0.22
GPC1-206ENST00000455111 CLRN1P58418 232 aa13.65□□□□□ -0.22
GPC1-206ENST00000455111 MRPS34P82930 218 aaKnown RBP13.65□□□□□ -0.22
GPC1-206ENST00000455111 KLF10Q13118 480 aa13.65□□□□□ -0.22
GPC1-206ENST00000455111 NRN1LQ496H8 165 aa13.65□□□□□ -0.22
GPC1-206ENST00000455111 GLCCI1Q86VQ1 547 aa13.65□□□□□ -0.22
GPC1-206ENST00000455111 AKR7LQ8NHP1 331 aa13.65□□□□□ -0.22
GPC1-206ENST00000455111 ZNF519Q8TB69 540 aa13.65□□□□□ -0.22
GPC1-206ENST00000455111 SYNPRQ8TBG9 265 aa13.65□□□□□ -0.22
GPC1-206ENST00000455111 TMEM239Q8WW34 195 aa13.65□□□□□ -0.22
GPC1-206ENST00000455111 SGTBQ96EQ0 304 aa13.65□□□□□ -0.22
GPC1-206ENST00000455111 LRRC37BQ96QE4 947 aa13.65□□□□□ -0.22
GPC1-206ENST00000455111 METTL17Q9H7H0 456 aaPredicted RBP13.65□□□□□ -0.22
GPC1-206ENST00000455111 RNF121Q9H920 327 aa13.65□□□□□ -0.22
GPC1-206ENST00000455111 CDH20Q9HBT6 801 aa13.65□□□□□ -0.22
GPC1-206ENST00000455111 INIPQ9NRY2 104 aa13.65□□□□□ -0.22
GPC1-206ENST00000455111 ZSCAN5BA6NJL1 495 aa13.64□□□□□ -0.23
GPC1-206ENST00000455111 IGHV3-13P01766 116 aa13.64□□□□□ -0.23
GPC1-206ENST00000455111 LCKP06239 509 aa13.64□□□□□ -0.23
GPC1-206ENST00000455111 H2AFXP16104 143 aaPredicted RBP13.64□□□□□ -0.23
GPC1-206ENST00000455111 ZNF26P17031 533 aaPredicted RBP13.64□□□□□ -0.23
GPC1-206ENST00000455111 SRP14P37108 136 aaKnown RBP13.64□□□□□ -0.23
GPC1-206ENST00000455111 RBM34P42696 430 aaKnown RBP13.64□□□□□ -0.23
GPC1-206ENST00000455111 CRYBB2P43320 205 aa13.64□□□□□ -0.23
GPC1-206ENST00000455111 KLF3P57682 345 aaPredicted RBP13.64□□□□□ -0.23
GPC1-206ENST00000455111 PSG4Q00888 419 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms