RNA–Protein interactions for RNA: ENST00000454398.1

HLA-DPA3-207, Transcript of major histocompatibility complex, class II, DP alpha 3 (pseudogene), humanhuman

BASIC

Gene HLA-DPA3, Length 229 nt, Biotype unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA3-207ENST00000454398 HHATQ5VTY9 493 aa5.07□□□□□ -1.6
HLA-DPA3-207ENST00000454398 ULK3Q6PHR2 472 aa5.07□□□□□ -1.6
HLA-DPA3-207ENST00000454398 DHRS4L2Q6PKH6 230 aa5.07□□□□□ -1.6
HLA-DPA3-207ENST00000454398 USP43Q70EL4 1123 aa5.07□□□□□ -1.6
HLA-DPA3-207ENST00000454398 SLC35D2Q76EJ3 337 aa5.07□□□□□ -1.6
HLA-DPA3-207ENST00000454398 SPATC1Q76KD6 591 aa5.07□□□□□ -1.6
HLA-DPA3-207ENST00000454398 ZNF627Q7L945 461 aa5.07□□□□□ -1.6
HLA-DPA3-207ENST00000454398 SLC16A14Q7RTX9 510 aa5.07□□□□□ -1.6
HLA-DPA3-207ENST00000454398 NANOGNBQ7Z5D8 188 aa5.07□□□□□ -1.6
HLA-DPA3-207ENST00000454398 C1QL4Q86Z23 238 aa5.07□□□□□ -1.6
HLA-DPA3-207ENST00000454398 SCAIQ8N9R8 606 aa5.07□□□□□ -1.6
HLA-DPA3-207ENST00000454398 RBM15BQ8NDT2 890 aaKnown RBP5.07□□□□□ -1.6
HLA-DPA3-207ENST00000454398 CPEB3Q8NE35 698 aaKnown RBP5.07□□□□□ -1.6
HLA-DPA3-207ENST00000454398 GPR32P1Q8NGA4 272 aa5.07□□□□□ -1.6
HLA-DPA3-207ENST00000454398 OR6T1Q8NGN1 323 aa5.07□□□□□ -1.6
HLA-DPA3-207ENST00000454398 OR1J1Q8NGS3 322 aa5.07□□□□□ -1.6
HLA-DPA3-207ENST00000454398 OR5J2Q8NH18 312 aa5.07□□□□□ -1.6
HLA-DPA3-207ENST00000454398 ABHD4Q8TB40 342 aa5.07□□□□□ -1.6
HLA-DPA3-207ENST00000454398 NANPQ8TBE9 248 aa5.07□□□□□ -1.6
HLA-DPA3-207ENST00000454398 SLC25A40Q8TBP6 338 aa5.07□□□□□ -1.6
HLA-DPA3-207ENST00000454398 NSMAFQ92636 917 aa5.07□□□□□ -1.6
HLA-DPA3-207ENST00000454398 TMEM54Q969K7 222 aa5.07□□□□□ -1.6
HLA-DPA3-207ENST00000454398 ZNF566Q969W8 418 aa5.07□□□□□ -1.6
HLA-DPA3-207ENST00000454398 ZNF747Q9BV97 191 aa5.07□□□□□ -1.6
HLA-DPA3-207ENST00000454398 ZNF385DQ9H6B1 395 aa5.07□□□□□ -1.6
HLA-DPA3-207ENST00000454398 RMND5AQ9H871 391 aa5.07□□□□□ -1.6
HLA-DPA3-207ENST00000454398 BCL2L10Q9HD36 194 aa5.07□□□□□ -1.6
HLA-DPA3-207ENST00000454398 SLC52A3Q9NQ40 469 aa5.07□□□□□ -1.6
HLA-DPA3-207ENST00000454398 DECR2Q9NUI1 292 aa5.07□□□□□ -1.6
HLA-DPA3-207ENST00000454398 DDX28Q9NUL7 540 aaKnown RBP5.07□□□□□ -1.6
HLA-DPA3-207ENST00000454398 GLTPQ9NZD2 209 aa5.07□□□□□ -1.6
HLA-DPA3-207ENST00000454398 SELENONQ9NZV5 590 aa5.07□□□□□ -1.6
HLA-DPA3-207ENST00000454398 VAPAQ9P0L0 249 aa5.07□□□□□ -1.6
HLA-DPA3-207ENST00000454398 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.07□□□□□ -1.6
HLA-DPA3-207ENST00000454398 LEF1Q9UJU2 399 aaPredicted RBP5.07□□□□□ -1.6
HLA-DPA3-207ENST00000454398 PURGQ9UJV8 347 aaKnown RBP5.07□□□□□ -1.6
HLA-DPA3-207ENST00000454398 ZNF232Q9UNY5 417 aa5.07□□□□□ -1.6
HLA-DPA3-207ENST00000454398 TRIM33Q9UPN9 1127 aa5.07□□□□□ -1.6
HLA-DPA3-207ENST00000454398 IFT52Q9Y366 437 aa5.07□□□□□ -1.6
HLA-DPA3-207ENST00000454398 DNAH9Q9NYC9 4486 aa5.07□□□□□ -1.6
HLA-DPA3-207ENST00000454398 LOC100509620A0A075B734 347 aa5.06□□□□□ -1.6
HLA-DPA3-207ENST00000454398 C5orf49A4QMS7 147 aa5.06□□□□□ -1.6
HLA-DPA3-207ENST00000454398 MCIDASD6RGH6 385 aa5.06□□□□□ -1.6
HLA-DPA3-207ENST00000454398 TRAPPC2LH3BP13 241 aa5.06□□□□□ -1.6
HLA-DPA3-207ENST00000454398 H7C1C5 153 aa5.06□□□□□ -1.6
HLA-DPA3-207ENST00000454398 UBDO15205 165 aa5.06□□□□□ -1.6
HLA-DPA3-207ENST00000454398 DHHO43323 396 aa5.06□□□□□ -1.6
HLA-DPA3-207ENST00000454398 UBOX5O94941 541 aa5.06□□□□□ -1.6
HLA-DPA3-207ENST00000454398 LYPD3O95274 346 aa5.06□□□□□ -1.6
HLA-DPA3-207ENST00000454398 SNAP29O95721 258 aa5.06□□□□□ -1.6
HLA-DPA3-207ENST00000454398 NGFP01138 241 aa5.06□□□□□ -1.6
HLA-DPA3-207ENST00000454398 MMP7P09237 267 aaPredicted RBP5.06□□□□□ -1.6
HLA-DPA3-207ENST00000454398 HKR1P10072 659 aa5.06□□□□□ -1.6
HLA-DPA3-207ENST00000454398 BMP2P12643 396 aa5.06□□□□□ -1.6
HLA-DPA3-207ENST00000454398 ZNF250P15622 560 aa5.06□□□□□ -1.6
HLA-DPA3-207ENST00000454398 SELEP16581 610 aa5.06□□□□□ -1.6
HLA-DPA3-207ENST00000454398 ZNF32P17041 273 aa5.06□□□□□ -1.6
HLA-DPA3-207ENST00000454398 FUT4P22083 530 aa5.06□□□□□ -1.6
HLA-DPA3-207ENST00000454398 CRYBB2P43320 205 aa5.06□□□□□ -1.6
HLA-DPA3-207ENST00000454398 LIMS1P48059 325 aa5.06□□□□□ -1.6
HLA-DPA3-207ENST00000454398 CLRN1P58418 232 aa5.06□□□□□ -1.6
HLA-DPA3-207ENST00000454398 LCN6P62502 163 aa5.06□□□□□ -1.6
HLA-DPA3-207ENST00000454398 MRPS11P82912 194 aaKnown RBP5.06□□□□□ -1.6
HLA-DPA3-207ENST00000454398 TXNL4AP83876 142 aaKnown RBP5.06□□□□□ -1.6
HLA-DPA3-207ENST00000454398 RPL18Q07020 188 aaKnown RBP5.06□□□□□ -1.6
HLA-DPA3-207ENST00000454398 DBPQ10586 325 aaPredicted RBP5.06□□□□□ -1.6
HLA-DPA3-207ENST00000454398 BAMBIQ13145 260 aa5.06□□□□□ -1.6
HLA-DPA3-207ENST00000454398 ZMYND11Q15326 602 aa5.06□□□□□ -1.6
HLA-DPA3-207ENST00000454398 HFEQ30201 348 aa5.06□□□□□ -1.6
HLA-DPA3-207ENST00000454398 RUNDC3AQ59EK9 446 aa5.06□□□□□ -1.6
HLA-DPA3-207ENST00000454398 REP15Q6BDI9 236 aa5.06□□□□□ -1.6
HLA-DPA3-207ENST00000454398 HIST2H2BDQ6DRA6 164 aa5.06□□□□□ -1.6
HLA-DPA3-207ENST00000454398 REEP3Q6NUK4 255 aa5.06□□□□□ -1.6
HLA-DPA3-207ENST00000454398 TMEM53Q6P2H8 277 aa5.06□□□□□ -1.6
HLA-DPA3-207ENST00000454398 SHISA2Q6UWI4 295 aa5.06□□□□□ -1.6
HLA-DPA3-207ENST00000454398 BRD3OSQ6XYD6 125 aa5.06□□□□□ -1.6
HLA-DPA3-207ENST00000454398 PXKQ7Z7A4 578 aa5.06□□□□□ -1.6
HLA-DPA3-207ENST00000454398 IGFN1Q86VF2 1251 aa5.06□□□□□ -1.6
HLA-DPA3-207ENST00000454398 RANBP3LQ86VV4 465 aaPredicted RBP5.06□□□□□ -1.6
HLA-DPA3-207ENST00000454398 ARMC8Q8IUR7 673 aa5.06□□□□□ -1.6
HLA-DPA3-207ENST00000454398 CCDC36Q8IYA8 594 aa5.06□□□□□ -1.6
HLA-DPA3-207ENST00000454398 GOLGA6L1Q8N7Z2 621 aa5.06□□□□□ -1.6
HLA-DPA3-207ENST00000454398 LSMEM1Q8N8F7 131 aa5.06□□□□□ -1.6
HLA-DPA3-207ENST00000454398 GLB1L3Q8NCI6 653 aaPredicted RBP5.06□□□□□ -1.6
HLA-DPA3-207ENST00000454398 IL17RDQ8NFM7 739 aa5.06□□□□□ -1.6
HLA-DPA3-207ENST00000454398 OR10AD1Q8NGE0 317 aa5.06□□□□□ -1.6
HLA-DPA3-207ENST00000454398 MOSPD2Q8NHP6 518 aa5.06□□□□□ -1.6
HLA-DPA3-207ENST00000454398 DNAJA4Q8WW22 397 aaPredicted RBP5.06□□□□□ -1.6
HLA-DPA3-207ENST00000454398 MCHR2Q969V1 340 aa5.06□□□□□ -1.6
HLA-DPA3-207ENST00000454398 LRRC58Q96CX6 371 aa5.06□□□□□ -1.6
HLA-DPA3-207ENST00000454398 SLC47A1Q96FL8 570 aa5.06□□□□□ -1.6
HLA-DPA3-207ENST00000454398 TIMD4Q96H15 378 aa5.06□□□□□ -1.6
HLA-DPA3-207ENST00000454398 JMJD8Q96S16 334 aa5.06□□□□□ -1.6
HLA-DPA3-207ENST00000454398 EPYCQ99645 322 aa5.06□□□□□ -1.6
HLA-DPA3-207ENST00000454398 MCHR1Q99705 422 aa5.06□□□□□ -1.6
HLA-DPA3-207ENST00000454398 EBF4Q9BQW3 602 aa5.06□□□□□ -1.6
HLA-DPA3-207ENST00000454398 CPPED1Q9BRF8 314 aaPredicted RBP5.06□□□□□ -1.6
HLA-DPA3-207ENST00000454398 OR2J1Q9GZK6 312 aa5.06□□□□□ -1.6
HLA-DPA3-207ENST00000454398 ARMC7Q9H6L4 198 aa5.06□□□□□ -1.6
HLA-DPA3-207ENST00000454398 MARCH7Q9H992 704 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms