RNA–Protein interactions for RNA: ENST00000453091.6

RIF1-206, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 8,053 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-206ENST00000453091 ZNF77Q15935 545 aa7.1□□□□□ -1.27
RIF1-206ENST00000453091 TMEM240Q5SV17 173 aa7.1□□□□□ -1.27
RIF1-206ENST00000453091 HACD4Q5VWC8 232 aa7.1□□□□□ -1.27
RIF1-206ENST00000453091 CALHM3Q86XJ0 350 aa7.1□□□□□ -1.27
RIF1-206ENST00000453091 GPR32P1Q8NGA4 272 aa7.1□□□□□ -1.27
RIF1-206ENST00000453091 ZG16BQ96DA0 208 aa7.1□□□□□ -1.27
RIF1-206ENST00000453091 LMF2Q9BU23 707 aaKnown RBP7.1□□□□□ -1.27
RIF1-206ENST00000453091 PITHD1Q9GZP4 211 aaPredicted RBP7.1□□□□□ -1.27
RIF1-206ENST00000453091 THAP10Q9P2Z0 257 aaPredicted RBP7.1□□□□□ -1.27
RIF1-206ENST00000453091 A0A0D9SG52 128 aa7.09□□□□□ -1.27
RIF1-206ENST00000453091 SOX15O60248 233 aa7.09□□□□□ -1.27
RIF1-206ENST00000453091 SCAF4O95104 1147 aaKnown RBP7.09□□□□□ -1.27
RIF1-206ENST00000453091 FAM189A2Q15884 450 aa7.09□□□□□ -1.27
RIF1-206ENST00000453091 TRIM61Q5EBN2 209 aa7.09□□□□□ -1.27
RIF1-206ENST00000453091 CLVS2Q5SYC1 327 aa7.09□□□□□ -1.27
RIF1-206ENST00000453091 WDSUB1Q8N9V3 476 aa7.09□□□□□ -1.27
RIF1-206ENST00000453091 NICN1Q9BSH3 213 aa7.09□□□□□ -1.27
RIF1-206ENST00000453091 TMEM59Q9BXS4 323 aa7.09□□□□□ -1.27
RIF1-206ENST00000453091 GSX2Q9BZM3 304 aa7.09□□□□□ -1.27
RIF1-206ENST00000453091 MS4A7Q9GZW8 240 aaPredicted RBP7.09□□□□□ -1.27
RIF1-206ENST00000453091 MED17Q9NVC6 651 aa7.09□□□□□ -1.27
RIF1-206ENST00000453091 MYH8P13535 1937 aa7.09□□□□□ -1.27
RIF1-206ENST00000453091 A6NIZ1 184 aa7.09□□□□□ -1.27
RIF1-206ENST00000453091 METTL12A8MUP2 240 aa7.09□□□□□ -1.27
RIF1-206ENST00000453091 LALBAP00709 142 aa7.09□□□□□ -1.27
RIF1-206ENST00000453091 RFC3P40938 356 aa7.09□□□□□ -1.27
RIF1-206ENST00000453091 AFF3P51826 1226 aaKnown RBP7.09□□□□□ -1.27
RIF1-206ENST00000453091 RAP1BP61224 184 aa7.09□□□□□ -1.27
RIF1-206ENST00000453091 RAP1AP62834 184 aa7.09□□□□□ -1.27
RIF1-206ENST00000453091 TIAL1Q01085 375 aaKnown RBP eCLIP7.09□□□□□ -1.271e-6■■□□□ 13.3
RIF1-206ENST00000453091 SFRP5Q5T4F7 317 aa7.09□□□□□ -1.27
RIF1-206ENST00000453091 ANGPTL5Q86XS5 388 aa7.09□□□□□ -1.27
RIF1-206ENST00000453091 OCSTAMPQ9BR26 566 aa7.09□□□□□ -1.27
RIF1-206ENST00000453091 PELOQ9BRX2 385 aaKnown RBP7.09□□□□□ -1.27
RIF1-206ENST00000453091 IL21Q9HBE4 155 aa7.09□□□□□ -1.27
RIF1-206ENST00000453091 FBXO34Q9NWN3 711 aa7.09□□□□□ -1.27
RIF1-206ENST00000453091 KLHL42Q9P2K6 505 aa7.09□□□□□ -1.27
RIF1-206ENST00000453091 ADAM29Q9UKF5 820 aa7.09□□□□□ -1.27
RIF1-206ENST00000453091 RGPD5Q99666 1765 aa7.09□□□□□ -1.27
RIF1-206ENST00000453091 OR6C6A6NF89 314 aa7.09□□□□□ -1.27
RIF1-206ENST00000453091 PHF1O43189 567 aaPredicted RBP7.09□□□□□ -1.27
RIF1-206ENST00000453091 SCGB1D1O95968 90 aa7.09□□□□□ -1.27
RIF1-206ENST00000453091 SOD1P00441 154 aa7.09□□□□□ -1.27
RIF1-206ENST00000453091 CD38P28907 300 aa7.09□□□□□ -1.27
RIF1-206ENST00000453091 OR2B8PP59922 312 aa7.09□□□□□ -1.27
RIF1-206ENST00000453091 IHHQ14623 411 aa7.09□□□□□ -1.27
RIF1-206ENST00000453091 LYSMD4Q5XG99 296 aa7.09□□□□□ -1.27
RIF1-206ENST00000453091 B3GNTL1Q67FW5 361 aaPredicted RBP7.09□□□□□ -1.27
RIF1-206ENST00000453091 BHLHE23Q8NDY6 225 aa7.09□□□□□ -1.27
RIF1-206ENST00000453091 FAM71CQ8NEG0 241 aa7.09□□□□□ -1.27
RIF1-206ENST00000453091 OR56B2PQ8NGI1 322 aa7.09□□□□□ -1.27
RIF1-206ENST00000453091 TSLPQ969D9 159 aa7.09□□□□□ -1.27
RIF1-206ENST00000453091 MARC2Q969Z3 335 aa7.09□□□□□ -1.27
RIF1-206ENST00000453091 SGPP1Q9BX95 441 aa7.09□□□□□ -1.27
RIF1-206ENST00000453091 HRH3Q9Y5N1 445 aa7.09□□□□□ -1.27
RIF1-206ENST00000453091 MYH13Q9UKX3 1938 aa7.09□□□□□ -1.27
RIF1-206ENST00000453091 A0A1W2PNR3 127 aa7.09□□□□□ -1.27
RIF1-206ENST00000453091 SULT1C2O00338 296 aa7.09□□□□□ -1.27
RIF1-206ENST00000453091 PAPD4Q6PIY7 484 aaKnown RBP7.09□□□□□ -1.27
RIF1-206ENST00000453091 CHRDQ9H2X0 955 aa7.09□□□□□ -1.27
RIF1-206ENST00000453091 C20orf141Q9NUB4 165 aa7.09□□□□□ -1.27
RIF1-206ENST00000453091 MED29Q9NX70 200 aa7.09□□□□□ -1.27
RIF1-206ENST00000453091 AGAP14A8MT82 685 aa7.09□□□□□ -1.27
RIF1-206ENST00000453091 H7C1Q1 480 aa7.09□□□□□ -1.27
RIF1-206ENST00000453091 GLCEO94923 617 aa7.09□□□□□ -1.27
RIF1-206ENST00000453091 ALOX5APP20292 161 aa7.09□□□□□ -1.27
RIF1-206ENST00000453091 CPT2P23786 658 aa7.09□□□□□ -1.27
RIF1-206ENST00000453091 HTR5AP47898 357 aa7.09□□□□□ -1.27
RIF1-206ENST00000453091 ELLP55199 621 aaPredicted RBP7.09□□□□□ -1.27
RIF1-206ENST00000453091 MTCP1P56278 107 aa7.09□□□□□ -1.27
RIF1-206ENST00000453091 ARG2P78540 354 aa7.09□□□□□ -1.27
RIF1-206ENST00000453091 ST3GAL2Q16842 350 aa7.09□□□□□ -1.27
RIF1-206ENST00000453091 SLC51BQ86UW2 128 aa7.09□□□□□ -1.27
RIF1-206ENST00000453091 PLEKHA3Q9HB20 300 aa7.09□□□□□ -1.27
RIF1-206ENST00000453091 TAS2R5Q9NYW4 299 aa7.09□□□□□ -1.27
RIF1-206ENST00000453091 A4GNTQ9UNA3 340 aa7.09□□□□□ -1.27
RIF1-206ENST00000453091 DDX60LQ5H9U9 1706 aaKnown RBP7.09□□□□□ -1.27
RIF1-206ENST00000453091 IGHV3-15A0A0B4J1V0 119 aa7.09□□□□□ -1.28
RIF1-206ENST00000453091 SEMG1P04279 462 aa7.09□□□□□ -1.28
RIF1-206ENST00000453091 HBQ1P09105 142 aa7.09□□□□□ -1.28
RIF1-206ENST00000453091 ZNF250P15622 560 aa7.09□□□□□ -1.28
RIF1-206ENST00000453091 SSTP61278 116 aa7.09□□□□□ -1.28
RIF1-206ENST00000453091 IKZF1Q13422 519 aa7.09□□□□□ -1.28
RIF1-206ENST00000453091 C4orf17Q53FE4 359 aa7.09□□□□□ -1.28
RIF1-206ENST00000453091 OR2B11Q5JQS5 317 aa7.09□□□□□ -1.28
RIF1-206ENST00000453091 FIP1L1Q6UN15 594 aaKnown RBP7.09□□□□□ -1.28
RIF1-206ENST00000453091 MRPL41Q8IXM3 137 aaKnown RBP7.09□□□□□ -1.28
RIF1-206ENST00000453091 KCNRGQ8N5I3 272 aa7.09□□□□□ -1.28
RIF1-206ENST00000453091 TCEAL3Q969E4 200 aa7.09□□□□□ -1.28
RIF1-206ENST00000453091 FN3KRPQ9HA64 309 aa7.09□□□□□ -1.28
RIF1-206ENST00000453091 PKD1L3Q7Z443 1732 aa7.09□□□□□ -1.28
RIF1-206ENST00000453091 LOC107986453A0A1B0GWG9 222 aa7.08□□□□□ -1.28
RIF1-206ENST00000453091 MEX3AA1L020 520 aaKnown RBP7.08□□□□□ -1.28
RIF1-206ENST00000453091 NRG2O14511 850 aaPredicted RBP7.08□□□□□ -1.28
RIF1-206ENST00000453091 CBX7O95931 251 aa7.08□□□□□ -1.28
RIF1-206ENST00000453091 CD80P33681 288 aa7.08□□□□□ -1.28
RIF1-206ENST00000453091 THBS2P35442 1172 aa7.08□□□□□ -1.28
RIF1-206ENST00000453091 CRYBB2P43320 205 aa7.08□□□□□ -1.28
RIF1-206ENST00000453091 SELENOPP49908 381 aa7.08□□□□□ -1.28
RIF1-206ENST00000453091 PRTGQ2VWP7 1150 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms