RNA–Protein interactions for RNA: ENST00000453046.5

SQSTM1-204, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 572 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-204ENST00000453046 SLC25A15Q9Y619 301 aa15.79■□□□□ 0.12
SQSTM1-204ENST00000453046 AQP7P3A6NL99 342 aa15.78■□□□□ 0.12
SQSTM1-204ENST00000453046 ZAR1LA6NP61 321 aa15.78■□□□□ 0.12
SQSTM1-204ENST00000453046 SHISA9B4DS77 424 aa15.78■□□□□ 0.12
SQSTM1-204ENST00000453046 H3BN98 237 aa15.78■□□□□ 0.12
SQSTM1-204ENST00000453046 M0R1B8 84 aa15.78■□□□□ 0.12
SQSTM1-204ENST00000453046 OR2T1O43869 369 aa15.78■□□□□ 0.12
SQSTM1-204ENST00000453046 FZD7O75084 574 aa15.78■□□□□ 0.12
SQSTM1-204ENST00000453046 KRT33AO76009 404 aa15.78■□□□□ 0.12
SQSTM1-204ENST00000453046 MT-ATP6P00846 226 aa15.78■□□□□ 0.12
SQSTM1-204ENST00000453046 ITGA5P08648 1049 aa15.78■□□□□ 0.12
SQSTM1-204ENST00000453046 MYF6P23409 242 aa15.78■□□□□ 0.12
SQSTM1-204ENST00000453046 MED21Q13503 144 aa15.78■□□□□ 0.12
SQSTM1-204ENST00000453046 MFSD13AQ14CX5 517 aa15.78■□□□□ 0.12
SQSTM1-204ENST00000453046 ETFDHQ16134 617 aa15.78■□□□□ 0.12
SQSTM1-204ENST00000453046 FAM69AQ5T7M9 428 aa15.78■□□□□ 0.12
SQSTM1-204ENST00000453046 MEX3DQ86XN8 651 aaKnown RBP15.78■□□□□ 0.12
SQSTM1-204ENST00000453046 SETD9Q8NE22 299 aa15.78■□□□□ 0.12
SQSTM1-204ENST00000453046 OR9K2Q8NGE7 335 aa15.78■□□□□ 0.12
SQSTM1-204ENST00000453046 OR13C2Q8NGS9 318 aa15.78■□□□□ 0.12
SQSTM1-204ENST00000453046 TMEM45BQ96B21 275 aa15.78■□□□□ 0.12
SQSTM1-204ENST00000453046 PTDSS2Q9BVG9 487 aa15.78■□□□□ 0.12
SQSTM1-204ENST00000453046 C1QTNF6Q9BXI9 259 aa15.78■□□□□ 0.12
SQSTM1-204ENST00000453046 SLC25A19Q9HC21 320 aa15.78■□□□□ 0.12
SQSTM1-204ENST00000453046 IL20Q9NYY1 176 aa15.78■□□□□ 0.12
SQSTM1-204ENST00000453046 ZNF229Q9UJW7 825 aa15.78■□□□□ 0.12
SQSTM1-204ENST00000453046 VAMP5O95183 116 aa15.77■□□□□ 0.12
SQSTM1-204ENST00000453046 CH25HO95992 272 aa15.77■□□□□ 0.12
SQSTM1-204ENST00000453046 BGLAPP02818 100 aa15.77■□□□□ 0.12
SQSTM1-204ENST00000453046 CD40P25942 277 aa15.77■□□□□ 0.12
SQSTM1-204ENST00000453046 GTF2E2P29084 291 aaKnown RBP15.77■□□□□ 0.12
SQSTM1-204ENST00000453046 EPHA2P29317 976 aa15.77■□□□□ 0.12
SQSTM1-204ENST00000453046 POLR2IP36954 125 aaKnown RBP15.77■□□□□ 0.12
SQSTM1-204ENST00000453046 TNK1Q13470 666 aa15.77■□□□□ 0.12
SQSTM1-204ENST00000453046 ZNF691Q5VV52 312 aa15.77■□□□□ 0.12
SQSTM1-204ENST00000453046 AGAP6Q5VW22 663 aa15.77■□□□□ 0.12
SQSTM1-204ENST00000453046 ABHD12BQ7Z5M8 362 aaPredicted RBP15.77■□□□□ 0.12
SQSTM1-204ENST00000453046 OAFQ86UD1 273 aa15.77■□□□□ 0.12
SQSTM1-204ENST00000453046 OR52L1Q8NGH7 329 aa15.77■□□□□ 0.12
SQSTM1-204ENST00000453046 KTI12Q96EK9 354 aaPredicted RBP15.77■□□□□ 0.12
SQSTM1-204ENST00000453046 ZNF385AQ96PM9 386 aaKnown RBP15.77■□□□□ 0.12
SQSTM1-204ENST00000453046 APOL4Q9BPW4 351 aa15.77■□□□□ 0.12
SQSTM1-204ENST00000453046 TRAF4Q9BUZ4 470 aaPredicted RBP15.77■□□□□ 0.12
SQSTM1-204ENST00000453046 PRRG3Q9BZD7 231 aa15.77■□□□□ 0.12
SQSTM1-204ENST00000453046 NDEL1Q9GZM8 345 aa15.77■□□□□ 0.12
SQSTM1-204ENST00000453046 SLCO5A1Q9H2Y9 848 aa15.77■□□□□ 0.12
SQSTM1-204ENST00000453046 NANSQ9NR45 359 aa15.77■□□□□ 0.12
SQSTM1-204ENST00000453046 SIGLEC7Q9Y286 467 aa15.77■□□□□ 0.12
SQSTM1-204ENST00000453046 AMDHD2Q9Y303 409 aa15.77■□□□□ 0.12
SQSTM1-204ENST00000453046 GMPPBQ9Y5P6 360 aa15.77■□□□□ 0.12
SQSTM1-204ENST00000453046 HSPE1-MOB4S4R3N1 261 aa15.77■□□□□ 0.12
SQSTM1-204ENST00000453046 NSD1Q96L73 2696 aaPredicted RBP15.76■□□□□ 0.11
SQSTM1-204ENST00000453046 GNAO1P09471 354 aa15.76■□□□□ 0.11
SQSTM1-204ENST00000453046 ASAH2BP0C7U1 165 aa15.76■□□□□ 0.11
SQSTM1-204ENST00000453046 MPGP29372 298 aa15.76■□□□□ 0.11
SQSTM1-204ENST00000453046 GGT2P36268 569 aa15.76■□□□□ 0.11
SQSTM1-204ENST00000453046 PTGES3Q15185 160 aaKnown RBP15.76■□□□□ 0.11
SQSTM1-204ENST00000453046 SLX4IPQ5VYV7 408 aa15.76■□□□□ 0.11
SQSTM1-204ENST00000453046 SMARCD3Q6STE5 483 aa15.76■□□□□ 0.11
SQSTM1-204ENST00000453046 KLHL24Q6TFL4 600 aa15.76■□□□□ 0.11
SQSTM1-204ENST00000453046 C8orf59Q8N0T1 100 aaPredicted RBP15.76■□□□□ 0.11
SQSTM1-204ENST00000453046 C17orf78Q8N4C9 275 aa15.76■□□□□ 0.11
SQSTM1-204ENST00000453046 C10orf53Q8N6V4 93 aa15.76■□□□□ 0.11
SQSTM1-204ENST00000453046 ZIC4Q8N9L1 334 aa15.76■□□□□ 0.11
SQSTM1-204ENST00000453046 POMGNT2Q8NAT1 580 aa15.76■□□□□ 0.11
SQSTM1-204ENST00000453046 C1orf162Q8NEQ5 155 aaPredicted RBP15.76■□□□□ 0.11
SQSTM1-204ENST00000453046 SLC25A36Q96CQ1 311 aa15.76■□□□□ 0.11
SQSTM1-204ENST00000453046 CNBD2Q96M20 576 aa15.76■□□□□ 0.11
SQSTM1-204ENST00000453046 ZNF570Q96NI8 536 aa15.76■□□□□ 0.11
SQSTM1-204ENST00000453046 PLA2G12AQ9BZM1 189 aa15.76■□□□□ 0.11
SQSTM1-204ENST00000453046 OR52D1Q9H346 318 aa15.76■□□□□ 0.11
SQSTM1-204ENST00000453046 EGLN3Q9H6Z9 239 aa15.76■□□□□ 0.11
SQSTM1-204ENST00000453046 SLC17A5Q9NRA2 495 aa15.76■□□□□ 0.11
SQSTM1-204ENST00000453046 TBC1D23Q9NUY8 699 aa15.76■□□□□ 0.11
SQSTM1-204ENST00000453046 CORINQ9Y5Q5 1042 aa15.76■□□□□ 0.11
SQSTM1-204ENST00000453046 TRAV27A0A087WT01 109 aa15.75■□□□□ 0.11
SQSTM1-204ENST00000453046 FTCDNL1E5RQL4 147 aa15.75■□□□□ 0.11
SQSTM1-204ENST00000453046 WNT11O96014 354 aa15.75■□□□□ 0.11
SQSTM1-204ENST00000453046 FUT1P19526 365 aa15.75■□□□□ 0.11
SQSTM1-204ENST00000453046 POU1F1P28069 291 aa15.75■□□□□ 0.11
SQSTM1-204ENST00000453046 PCSK6P29122 969 aa15.75■□□□□ 0.11
SQSTM1-204ENST00000453046 RPS5P46782 204 aaKnown RBP15.75■□□□□ 0.11
SQSTM1-204ENST00000453046 SPOCK1Q08629 439 aa15.75■□□□□ 0.11
SQSTM1-204ENST00000453046 ZBED5Q49AG3 693 aa15.75■□□□□ 0.11
SQSTM1-204ENST00000453046 KRT80Q6KB66 452 aa15.75■□□□□ 0.11
SQSTM1-204ENST00000453046 SLC27A4Q6P1M0 643 aa15.75■□□□□ 0.11
SQSTM1-204ENST00000453046 NANOGNBQ7Z5D8 188 aa15.75■□□□□ 0.11
SQSTM1-204ENST00000453046 DTX2Q86UW9 622 aa15.75■□□□□ 0.11
SQSTM1-204ENST00000453046 SCAIQ8N9R8 606 aa15.75■□□□□ 0.11
SQSTM1-204ENST00000453046 OR8D4Q8NGM9 314 aa15.75■□□□□ 0.11
SQSTM1-204ENST00000453046 MFSD8Q8NHS3 518 aa15.75■□□□□ 0.11
SQSTM1-204ENST00000453046 TAAR8Q969N4 342 aa15.75■□□□□ 0.11
SQSTM1-204ENST00000453046 MOGAT1Q96PD6 335 aa15.75■□□□□ 0.11
SQSTM1-204ENST00000453046 TEX12Q9BXU0 123 aa15.75■□□□□ 0.11
SQSTM1-204ENST00000453046 BARX1Q9HBU1 254 aaPredicted RBP15.75■□□□□ 0.11
SQSTM1-204ENST00000453046 RASD1Q9Y272 281 aa15.75■□□□□ 0.11
SQSTM1-204ENST00000453046 HIF3AQ9Y2N7 669 aa15.75■□□□□ 0.11
SQSTM1-204ENST00000453046 CSPG4Q6UVK1 2322 aa15.75■□□□□ 0.11
SQSTM1-204ENST00000453046 TLN2Q9Y4G6 2542 aa15.74■□□□□ 0.11
SQSTM1-204ENST00000453046 HIVEP2P31629 2446 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms