RNA–Protein interactions for RNA: ENST00000452520.1

HMGB1P26-201, Transcript of high mobility group box 1 pseudogene 26, humanhuman

BASIC

Gene HMGB1P26, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P26-201ENST00000452520 SPACA1Q9HBV2 294 aa3.78□□□□□ -1.8
HMGB1P26-201ENST00000452520 MRPL47Q9HD33 250 aaKnown RBP3.78□□□□□ -1.8
HMGB1P26-201ENST00000452520 ACP6Q9NPH0 428 aa3.78□□□□□ -1.8
HMGB1P26-201ENST00000452520 TREM2Q9NZC2 230 aa3.78□□□□□ -1.8
HMGB1P26-201ENST00000452520 CHMP5Q9NZZ3 219 aa3.78□□□□□ -1.8
HMGB1P26-201ENST00000452520 ABCD2Q9UBJ2 740 aa3.78□□□□□ -1.8
HMGB1P26-201ENST00000452520 DUX4Q9UBX2 424 aa3.78□□□□□ -1.8
HMGB1P26-201ENST00000452520 DDX19BQ9UMR2 479 aa3.78□□□□□ -1.8
HMGB1P26-201ENST00000452520 RCL1Q9Y2P8 373 aaKnown RBP3.78□□□□□ -1.8
HMGB1P26-201ENST00000452520 YARS2Q9Y2Z4 477 aaKnown RBP3.78□□□□□ -1.8
HMGB1P26-201ENST00000452520 SMAD5-AS1Q9Y6J3 95 aa3.78□□□□□ -1.8
HMGB1P26-201ENST00000452520 IGHV3OR16-13A0A075B7E8 117 aa3.77□□□□□ -1.81
HMGB1P26-201ENST00000452520 MRPS12O15235 138 aaKnown RBP3.77□□□□□ -1.81
HMGB1P26-201ENST00000452520 GPAA1O43292 621 aa3.77□□□□□ -1.81
HMGB1P26-201ENST00000452520 MGRN1O60291 552 aa3.77□□□□□ -1.81
HMGB1P26-201ENST00000452520 ETHE1O95571 254 aa3.77□□□□□ -1.81
HMGB1P26-201ENST00000452520 DCNP07585 359 aaKnown RBP3.77□□□□□ -1.81
HMGB1P26-201ENST00000452520 PGAM2P15259 253 aa3.77□□□□□ -1.81
HMGB1P26-201ENST00000452520 HOXB8P17481 243 aaPredicted RBP3.77□□□□□ -1.81
HMGB1P26-201ENST00000452520 NTSP30990 170 aa3.77□□□□□ -1.81
HMGB1P26-201ENST00000452520 TNFSF9P41273 254 aa3.77□□□□□ -1.81
HMGB1P26-201ENST00000452520 GPR1P46091 355 aa3.77□□□□□ -1.81
HMGB1P26-201ENST00000452520 SLC26A2P50443 739 aa3.77□□□□□ -1.81
HMGB1P26-201ENST00000452520 ATP6V0D1P61421 351 aa3.77□□□□□ -1.81
HMGB1P26-201ENST00000452520 TNNC1P63316 161 aa3.77□□□□□ -1.81
HMGB1P26-201ENST00000452520 CXCL6P80162 114 aa3.77□□□□□ -1.81
HMGB1P26-201ENST00000452520 CD47Q08722 323 aa3.77□□□□□ -1.81
HMGB1P26-201ENST00000452520 PDIA2Q13087 525 aaKnown RBP3.77□□□□□ -1.81
HMGB1P26-201ENST00000452520 ZNF239Q16600 458 aaKnown RBP3.77□□□□□ -1.81
HMGB1P26-201ENST00000452520 PGGHGQ32M88 737 aa3.77□□□□□ -1.81
HMGB1P26-201ENST00000452520 OLFML2AQ68BL7 652 aa3.77□□□□□ -1.81
HMGB1P26-201ENST00000452520 C11orf71Q6IPW1 123 aa3.77□□□□□ -1.81
HMGB1P26-201ENST00000452520 WDR74Q6RFH5 385 aaPredicted RBP3.77□□□□□ -1.81
HMGB1P26-201ENST00000452520 UNQ9370/PRO34162Q6UXP9 181 aa3.77□□□□□ -1.81
HMGB1P26-201ENST00000452520 C2orf66Q6UXQ4 117 aa3.77□□□□□ -1.81
HMGB1P26-201ENST00000452520 COMTD1Q86VU5 262 aa3.77□□□□□ -1.81
HMGB1P26-201ENST00000452520 ZNF547Q8IVP9 402 aa3.77□□□□□ -1.81
HMGB1P26-201ENST00000452520 ST13P4Q8IZP2 240 aaPredicted RBP3.77□□□□□ -1.81
HMGB1P26-201ENST00000452520 C6orf223Q8N319 242 aa3.77□□□□□ -1.81
HMGB1P26-201ENST00000452520 ARHGAP18Q8N392 663 aa3.77□□□□□ -1.81
HMGB1P26-201ENST00000452520 RHOXF1Q8NHV9 184 aa3.77□□□□□ -1.81
HMGB1P26-201ENST00000452520 FGF14Q92915 247 aa3.77□□□□□ -1.81
HMGB1P26-201ENST00000452520 ISOC2Q96AB3 205 aa3.77□□□□□ -1.81
HMGB1P26-201ENST00000452520 FAM131CQ96AQ9 280 aa3.77□□□□□ -1.81
HMGB1P26-201ENST00000452520 NRBF2Q96F24 287 aa3.77□□□□□ -1.81
HMGB1P26-201ENST00000452520 MED8Q96G25 268 aa3.77□□□□□ -1.81
HMGB1P26-201ENST00000452520 TSSK3Q96PN8 268 aa3.77□□□□□ -1.81
HMGB1P26-201ENST00000452520 KCNS3Q9BQ31 491 aa3.77□□□□□ -1.81
HMGB1P26-201ENST00000452520 HES7Q9BYE0 225 aa3.77□□□□□ -1.81
HMGB1P26-201ENST00000452520 SELENOIQ9C0D9 397 aa3.77□□□□□ -1.81
HMGB1P26-201ENST00000452520 SIAEQ9HAT2 523 aa3.77□□□□□ -1.81
HMGB1P26-201ENST00000452520 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP3.77□□□□□ -1.81
HMGB1P26-201ENST00000452520 NRBP2Q9NSY0 501 aa3.77□□□□□ -1.81
HMGB1P26-201ENST00000452520 ADA2Q9NZK5 511 aa3.77□□□□□ -1.81
HMGB1P26-201ENST00000452520 ADAM22Q9P0K1 906 aa3.77□□□□□ -1.81
HMGB1P26-201ENST00000452520 KLHL21Q9UJP4 597 aa3.77□□□□□ -1.81
HMGB1P26-201ENST00000452520 ZNF256Q9Y2P7 627 aaPredicted RBP3.77□□□□□ -1.81
HMGB1P26-201ENST00000452520 IGHV3-35A0A0C4DH35 117 aa3.76□□□□□ -1.81
HMGB1P26-201ENST00000452520 A8MUA0 341 aa3.76□□□□□ -1.81
HMGB1P26-201ENST00000452520 ERVV-1B6SEH8 477 aa3.76□□□□□ -1.81
HMGB1P26-201ENST00000452520 SLC9A3R1O14745 358 aaPredicted RBP3.76□□□□□ -1.81
HMGB1P26-201ENST00000452520 GMDSO60547 372 aa3.76□□□□□ -1.81
HMGB1P26-201ENST00000452520 SLC19A2O60779 497 aa3.76□□□□□ -1.81
HMGB1P26-201ENST00000452520 CLDN11O75508 207 aa3.76□□□□□ -1.81
HMGB1P26-201ENST00000452520 KIR2DS4P43632 304 aa3.76□□□□□ -1.81
HMGB1P26-201ENST00000452520 PSMC5P62195 406 aa3.76□□□□□ -1.81
HMGB1P26-201ENST00000452520 SELENOTP62341 195 aa3.76□□□□□ -1.81
HMGB1P26-201ENST00000452520 ECH1Q13011 328 aa3.76□□□□□ -1.81
HMGB1P26-201ENST00000452520 ASAH1Q13510 395 aa3.76□□□□□ -1.81
HMGB1P26-201ENST00000452520 LRRC36Q1X8D7 754 aa3.76□□□□□ -1.81
HMGB1P26-201ENST00000452520 TRMT5Q32P41 509 aaKnown RBP3.76□□□□□ -1.81
HMGB1P26-201ENST00000452520 PAN3Q58A45 887 aaKnown RBP3.76□□□□□ -1.81
HMGB1P26-201ENST00000452520 OR2B11Q5JQS5 317 aa3.76□□□□□ -1.81
HMGB1P26-201ENST00000452520 ERICH5Q6P6B1 374 aa3.76□□□□□ -1.81
HMGB1P26-201ENST00000452520 Q6ZR54 194 aa3.76□□□□□ -1.81
HMGB1P26-201ENST00000452520 COPS6Q7L5N1 327 aa3.76□□□□□ -1.81
HMGB1P26-201ENST00000452520 RBM45Q8IUH3 476 aaKnown RBP3.76□□□□□ -1.81
HMGB1P26-201ENST00000452520 ZBED8Q8IZ13 594 aa3.76□□□□□ -1.81
HMGB1P26-201ENST00000452520 CADM2Q8N3J6 435 aa3.76□□□□□ -1.81
HMGB1P26-201ENST00000452520 HSD17B11Q8NBQ5 300 aa3.76□□□□□ -1.81
HMGB1P26-201ENST00000452520 MNS1Q8NEH6 495 aa3.76□□□□□ -1.81
HMGB1P26-201ENST00000452520 FGGYQ96C11 551 aa3.76□□□□□ -1.81
HMGB1P26-201ENST00000452520 HIST1H4GQ99525 98 aa3.76□□□□□ -1.81
HMGB1P26-201ENST00000452520 RAB1BQ9H0U4 201 aa3.76□□□□□ -1.81
HMGB1P26-201ENST00000452520 C20orf85Q9H1P6 137 aa3.76□□□□□ -1.81
HMGB1P26-201ENST00000452520 CSNK1G1Q9HCP0 422 aa3.76□□□□□ -1.81
HMGB1P26-201ENST00000452520 LGALS13Q9UHV8 139 aa3.76□□□□□ -1.81
HMGB1P26-201ENST00000452520 ZNF107Q9UII5 783 aaPredicted RBP3.76□□□□□ -1.81
HMGB1P26-201ENST00000452520 KIF25Q9UIL4 384 aa3.76□□□□□ -1.81
HMGB1P26-201ENST00000452520 GNPTGQ9UJJ9 305 aa3.76□□□□□ -1.81
HMGB1P26-201ENST00000452520 ZNF229Q9UJW7 825 aa3.76□□□□□ -1.81
HMGB1P26-201ENST00000452520 NOSIPQ9Y314 301 aaKnown RBP3.76□□□□□ -1.81
HMGB1P26-201ENST00000452520 GOLT1BQ9Y3E0 138 aa3.76□□□□□ -1.81
HMGB1P26-201ENST00000452520 FLVCR1Q9Y5Y0 555 aa3.76□□□□□ -1.81
HMGB1P26-201ENST00000452520 IGHV7-81A0A0B4J1V7 117 aa3.75□□□□□ -1.81
HMGB1P26-201ENST00000452520 ERICH2A1L162 156 aa3.75□□□□□ -1.81
HMGB1P26-201ENST00000452520 CENPXA8MT69 81 aa3.75□□□□□ -1.81
HMGB1P26-201ENST00000452520 PDZK1P1A8MUH7 402 aa3.75□□□□□ -1.81
HMGB1P26-201ENST00000452520 F6UB75 175 aa3.75□□□□□ -1.81
HMGB1P26-201ENST00000452520 PLPP1O14494 284 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms