RNA–Protein interactions for RNA: ENST00000452143.5

USP1-204, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 3

Gene USP1, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-204ENST00000452143 OR6T1Q8NGN1 323 aa9.3□□□□□ -0.92
USP1-204ENST00000452143 FGFBP3Q8TAT2 258 aa9.3□□□□□ -0.92
USP1-204ENST00000452143 SYNPRQ8TBG9 265 aa9.3□□□□□ -0.92
USP1-204ENST00000452143 ADAMTS16Q8TE57 1224 aa9.3□□□□□ -0.92
USP1-204ENST00000452143 FAM216AQ8WUB2 273 aa9.3□□□□□ -0.92
USP1-204ENST00000452143 C11orf40Q8WZ69 217 aa9.3□□□□□ -0.92
USP1-204ENST00000452143 FAHD2AQ96GK7 314 aa9.3□□□□□ -0.92
USP1-204ENST00000452143 SH3GL3Q99963 347 aa9.3□□□□□ -0.92
USP1-204ENST00000452143 EBF4Q9BQW3 602 aa9.3□□□□□ -0.92
USP1-204ENST00000452143 PLA2G12AQ9BZM1 189 aa9.3□□□□□ -0.92
USP1-204ENST00000452143 PCDHAC1Q9H158 963 aa9.3□□□□□ -0.92
USP1-204ENST00000452143 LRMDAQ9H2I8 198 aa9.3□□□□□ -0.92
USP1-204ENST00000452143 RABEP2Q9H5N1 569 aa9.3□□□□□ -0.92
USP1-204ENST00000452143 ZNF665Q9H7R5 613 aa9.3□□□□□ -0.92
USP1-204ENST00000452143 G6PC2Q9NQR9 355 aa9.3□□□□□ -0.92
USP1-204ENST00000452143 PCDHB10Q9UN67 800 aa9.3□□□□□ -0.92
USP1-204ENST00000452143 TRIM33Q9UPN9 1127 aa9.3□□□□□ -0.92
USP1-204ENST00000452143 IGHV1-69-2A0A0G2JMI3 117 aa9.29□□□□□ -0.92
USP1-204ENST00000452143 IQCMA0A1B0GVH7 501 aa9.29□□□□□ -0.92
USP1-204ENST00000452143 TMEM89A2RUT3 159 aa9.29□□□□□ -0.92
USP1-204ENST00000452143 TRAPPC13A5PLN9 417 aa9.29□□□□□ -0.92
USP1-204ENST00000452143 CPSF4LA6NMK7 179 aaKnown RBP9.29□□□□□ -0.92
USP1-204ENST00000452143 CLDN25C9JDP6 229 aa9.29□□□□□ -0.92
USP1-204ENST00000452143 TRIM77I1YAP6 450 aa9.29□□□□□ -0.92
USP1-204ENST00000452143 J3QLI3 93 aa9.29□□□□□ -0.92
USP1-204ENST00000452143 ERLIN1O75477 346 aa9.29□□□□□ -0.92
USP1-204ENST00000452143 CH25HO95992 272 aa9.29□□□□□ -0.92
USP1-204ENST00000452143 LCKP06239 509 aa9.29□□□□□ -0.92
USP1-204ENST00000452143 ASAH2BP0C7U1 165 aa9.29□□□□□ -0.92
USP1-204ENST00000452143 PATE4P0C8F1 98 aa9.29□□□□□ -0.92
USP1-204ENST00000452143 EPHA1P21709 976 aa9.29□□□□□ -0.92
USP1-204ENST00000452143 GATA3P23771 443 aa9.29□□□□□ -0.92
USP1-204ENST00000452143 ZNF84P51523 738 aa9.29□□□□□ -0.92
USP1-204ENST00000452143 CLRN1P58418 232 aa9.29□□□□□ -0.92
USP1-204ENST00000452143 CCL8P80075 99 aa9.29□□□□□ -0.92
USP1-204ENST00000452143 PLP2Q04941 152 aa9.29□□□□□ -0.92
USP1-204ENST00000452143 MELKQ14680 651 aa9.29□□□□□ -0.92
USP1-204ENST00000452143 NPTX1Q15818 432 aa9.29□□□□□ -0.92
USP1-204ENST00000452143 DUSP7Q16829 419 aa9.29□□□□□ -0.92
USP1-204ENST00000452143 AGKQ53H12 422 aa9.29□□□□□ -0.92
USP1-204ENST00000452143 DLEU7Q6UYE1 221 aa9.29□□□□□ -0.92
USP1-204ENST00000452143 SLC16A14Q7RTX9 510 aa9.29□□□□□ -0.92
USP1-204ENST00000452143 C1QL2Q7Z5L3 287 aa9.29□□□□□ -0.92
USP1-204ENST00000452143 PATL1Q86TB9 770 aaKnown RBP9.29□□□□□ -0.92
USP1-204ENST00000452143 PTOV1Q86YD1 416 aa9.29□□□□□ -0.92
USP1-204ENST00000452143 PAQR4Q8N4S7 273 aaPredicted RBP9.29□□□□□ -0.92
USP1-204ENST00000452143 NOXO1Q8NFA2 376 aa9.29□□□□□ -0.92
USP1-204ENST00000452143 GPR32P1Q8NGA4 272 aa9.29□□□□□ -0.92
USP1-204ENST00000452143 RASSF5Q8WWW0 418 aa9.29□□□□□ -0.92
USP1-204ENST00000452143 STON2Q8WXE9 905 aa9.29□□□□□ -0.92
USP1-204ENST00000452143 SEPHS2Q99611 448 aa9.29□□□□□ -0.92
USP1-204ENST00000452143 RBM4Q9BWF3 364 aaKnown RBP9.29□□□□□ -0.92
USP1-204ENST00000452143 RNF121Q9H920 327 aa9.29□□□□□ -0.92
USP1-204ENST00000452143 SAP30LQ9HAJ7 183 aa9.29□□□□□ -0.92
USP1-204ENST00000452143 TMBIM4Q9HC24 238 aa9.29□□□□□ -0.92
USP1-204ENST00000452143 STX18Q9P2W9 335 aaKnown RBP9.29□□□□□ -0.92
USP1-204ENST00000452143 LEF1Q9UJU2 399 aaPredicted RBP9.29□□□□□ -0.92
USP1-204ENST00000452143 SLC7A7Q9UM01 511 aa9.29□□□□□ -0.92
USP1-204ENST00000452143 LOC105371242A0A075B767 164 aa9.28□□□□□ -0.92
USP1-204ENST00000452143 M0QX08 132 aa9.28□□□□□ -0.92
USP1-204ENST00000452143 KPNA4O00629 521 aaPredicted RBP9.28□□□□□ -0.92
USP1-204ENST00000452143 SPRY1O43609 319 aaPredicted RBP9.28□□□□□ -0.92
USP1-204ENST00000452143 CDC14BO60729 498 aa9.28□□□□□ -0.92
USP1-204ENST00000452143 DEAF1O75398 565 aaPredicted RBP9.28□□□□□ -0.92
USP1-204ENST00000452143 LYPD3O95274 346 aa9.28□□□□□ -0.92
USP1-204ENST00000452143 MPZL1O95297 269 aa9.28□□□□□ -0.92
USP1-204ENST00000452143 BCL10O95999 233 aa9.28□□□□□ -0.92
USP1-204ENST00000452143 CLPTM1O96005 669 aa9.28□□□□□ -0.92
USP1-204ENST00000452143 IGF2P01344 180 aa9.28□□□□□ -0.92
USP1-204ENST00000452143 OPN1SWP03999 348 aa9.28□□□□□ -0.92
USP1-204ENST00000452143 THY1P04216 161 aa9.28□□□□□ -0.92
USP1-204ENST00000452143 HIST1H2ABP04908 130 aa9.28□□□□□ -0.92
USP1-204ENST00000452143 QDPRP09417 244 aa9.28□□□□□ -0.92
USP1-204ENST00000452143 UMPSP11172 480 aa9.28□□□□□ -0.92
USP1-204ENST00000452143 NR2C1P13056 603 aa9.28□□□□□ -0.92
USP1-204ENST00000452143 APLNRP35414 380 aa9.28□□□□□ -0.92
USP1-204ENST00000452143 DAP3P51398 398 aaKnown RBP9.28□□□□□ -0.92
USP1-204ENST00000452143 ZNF133P52736 654 aaPredicted RBP9.28□□□□□ -0.92
USP1-204ENST00000452143 UCP2P55851 309 aa9.28□□□□□ -0.92
USP1-204ENST00000452143 HFEQ30201 348 aa9.28□□□□□ -0.92
USP1-204ENST00000452143 ALKBH6Q3KRA9 238 aa9.28□□□□□ -0.92
USP1-204ENST00000452143 RUNDC3AQ59EK9 446 aa9.28□□□□□ -0.92
USP1-204ENST00000452143 INTS11Q5TA45 600 aaKnown RBP9.28□□□□□ -0.92
USP1-204ENST00000452143 UNQ6126/PRO20091Q6UXV3 157 aa9.28□□□□□ -0.92
USP1-204ENST00000452143 C1orf229Q6ZS94 237 aaPredicted RBP9.28□□□□□ -0.92
USP1-204ENST00000452143 HIST3H2AQ7L7L0 130 aa9.28□□□□□ -0.92
USP1-204ENST00000452143 DHDDSQ86SQ9 333 aa9.28□□□□□ -0.92
USP1-204ENST00000452143 DPP10Q8N608 796 aa9.28□□□□□ -0.92
USP1-204ENST00000452143 LRRC17Q8N6Y2 441 aa9.28□□□□□ -0.92
USP1-204ENST00000452143 RBM15BQ8NDT2 890 aaKnown RBP9.28□□□□□ -0.92
USP1-204ENST00000452143 SGMS2Q8NHU3 365 aa9.28□□□□□ -0.92
USP1-204ENST00000452143 LRRC8CQ8TDW0 803 aa9.28□□□□□ -0.92
USP1-204ENST00000452143 GCDHQ92947 438 aaPredicted RBP9.28□□□□□ -0.92
USP1-204ENST00000452143 HIST1H2ACQ93077 130 aa9.28□□□□□ -0.92
USP1-204ENST00000452143 MCHR2Q969V1 340 aa9.28□□□□□ -0.92
USP1-204ENST00000452143 TIMD4Q96H15 378 aa9.28□□□□□ -0.92
USP1-204ENST00000452143 SUCNR1Q9BXA5 334 aa9.28□□□□□ -0.92
USP1-204ENST00000452143 MRPL13Q9BYD1 178 aaKnown RBP9.28□□□□□ -0.92
USP1-204ENST00000452143 SMURF2Q9HAU4 748 aa9.28□□□□□ -0.92
USP1-204ENST00000452143 DECR2Q9NUI1 292 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms