RNA–Protein interactions for RNA: ENST00000450251.5

USP53-202, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP53, Length 6,072 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-202ENST00000450251 RGL4Q8IZJ4 473 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 PUSL1Q8N0Z8 303 aaKnown RBP2.04□□□□□ -2.08
USP53-202ENST00000450251 POC1AQ8NBT0 407 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 OR4K2Q8NGD2 314 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 OR4K5Q8NGD3 323 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 OR13C5Q8NGS8 318 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 PHOSPHO1Q8TCT1 267 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 DYRK2Q92630 601 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 NUDT11Q96G61 164 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 LCORQ96JN0 433 aaPredicted RBP2.04□□□□□ -2.08
USP53-202ENST00000450251 HS3ST6Q96QI5 342 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 TEAD3Q99594 435 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 RSG1Q9BU20 258 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 WDR18Q9BV38 432 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 PRDM7Q9NQW5 492 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 TM7SF3Q9NS93 570 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 ZNF701Q9NV72 531 aaPredicted RBP2.04□□□□□ -2.08
USP53-202ENST00000450251 ZDHHC3Q9NYG2 299 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 MRPL15Q9P015 296 aaKnown RBP2.04□□□□□ -2.08
USP53-202ENST00000450251 RCC2Q9P258 522 aaKnown RBP2.04□□□□□ -2.08
USP53-202ENST00000450251 RHCGQ9UBD6 479 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 PEF1Q9UBV8 284 aaKnown RBP2.04□□□□□ -2.08
USP53-202ENST00000450251 RAB22AQ9UL26 194 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 TRAPPC1Q9Y5R8 145 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 RBBP6Q7Z6E9 1792 aaKnown RBP2.04□□□□□ -2.08
USP53-202ENST00000450251 M0R2Z0 102 aa2.03□□□□□ -2.08
USP53-202ENST00000450251 RRP8O43159 456 aaKnown RBP2.03□□□□□ -2.08
USP53-202ENST00000450251 DNPH1O43598 174 aa2.03□□□□□ -2.08
USP53-202ENST00000450251 C6orf47O95873 294 aa2.03□□□□□ -2.08
USP53-202ENST00000450251 NRASP01111 189 aa2.03□□□□□ -2.08
USP53-202ENST00000450251 HRASP01112 189 aa2.03□□□□□ -2.08
USP53-202ENST00000450251 KRASP01116 189 aa2.03□□□□□ -2.08
USP53-202ENST00000450251 TBC1D3HP0C7X1 549 aa2.03□□□□□ -2.08
USP53-202ENST00000450251 RNF224P0DH78 156 aa2.03□□□□□ -2.08
USP53-202ENST00000450251 OR13C7P0DN81 318 aa2.03□□□□□ -2.08
USP53-202ENST00000450251 GPX2P18283 190 aa2.03□□□□□ -2.08
USP53-202ENST00000450251 ATF1P18846 271 aa2.03□□□□□ -2.08
USP53-202ENST00000450251 CSNK2A2P19784 350 aaPredicted RBP2.03□□□□□ -2.08
USP53-202ENST00000450251 PGCP20142 388 aa2.03□□□□□ -2.08
USP53-202ENST00000450251 RPS4Y1P22090 263 aaKnown RBP2.03□□□□□ -2.08
USP53-202ENST00000450251 ACHEP22303 614 aa2.03□□□□□ -2.08
USP53-202ENST00000450251 FCARP24071 287 aa2.03□□□□□ -2.08
USP53-202ENST00000450251 RPL12P30050 165 aaKnown RBP2.03□□□□□ -2.08
USP53-202ENST00000450251 CHRNB4P30926 498 aa2.03□□□□□ -2.08
USP53-202ENST00000450251 SSR2P43308 183 aa2.03□□□□□ -2.08
USP53-202ENST00000450251 HOXC5Q00444 222 aa2.03□□□□□ -2.08
USP53-202ENST00000450251 IFITM3Q01628 133 aa2.03□□□□□ -2.08
USP53-202ENST00000450251 DMWDQ09019 674 aa2.03□□□□□ -2.08
USP53-202ENST00000450251 SRSF5Q13243 272 aaKnown RBP2.03□□□□□ -2.08
USP53-202ENST00000450251 SMN1Q16637 294 aaKnown RBP2.03□□□□□ -2.08
USP53-202ENST00000450251 ODF4Q2M2E3 257 aa2.03□□□□□ -2.08
USP53-202ENST00000450251 PLPPR5Q32ZL2 321 aa2.03□□□□□ -2.08
USP53-202ENST00000450251 TMEM97Q5BJF2 176 aa2.03□□□□□ -2.08
USP53-202ENST00000450251 MS4A13Q5J8X5 152 aa2.03□□□□□ -2.08
USP53-202ENST00000450251 SIRPB2Q5JXA9 342 aa2.03□□□□□ -2.08
USP53-202ENST00000450251 PRAMEF20Q5VT98 475 aa2.03□□□□□ -2.08
USP53-202ENST00000450251 OR8G2PQ6IF36 304 aa2.03□□□□□ -2.08
USP53-202ENST00000450251 CD300LDQ6UXZ3 194 aa2.03□□□□□ -2.08
USP53-202ENST00000450251 TAS1R3Q7RTX0 852 aa2.03□□□□□ -2.08
USP53-202ENST00000450251 KIAA0907Q7Z7F0 614 aaPredicted RBP2.03□□□□□ -2.08
USP53-202ENST00000450251 TRAPPC6BQ86SZ2 158 aa2.03□□□□□ -2.08
USP53-202ENST00000450251 THOC6Q86W42 341 aaKnown RBP2.03□□□□□ -2.08
USP53-202ENST00000450251 ZNF573Q86YE8 665 aa2.03□□□□□ -2.08
USP53-202ENST00000450251 ZNF547Q8IVP9 402 aa2.03□□□□□ -2.08
USP53-202ENST00000450251 CISD2Q8N5K1 135 aaKnown RBP2.03□□□□□ -2.08
USP53-202ENST00000450251 OR9Q2Q8NGE9 314 aa2.03□□□□□ -2.08
USP53-202ENST00000450251 OR5A1Q8NGJ0 315 aa2.03□□□□□ -2.08
USP53-202ENST00000450251 OR5M1Q8NGP8 315 aa2.03□□□□□ -2.08
USP53-202ENST00000450251 PROKR1Q8TCW9 393 aa2.03□□□□□ -2.08
USP53-202ENST00000450251 NINJ1Q92982 152 aa2.03□□□□□ -2.08
USP53-202ENST00000450251 ANKRD9Q96BM1 317 aaPredicted RBP2.03□□□□□ -2.08
USP53-202ENST00000450251 MS4A6EQ96DS6 147 aa2.03□□□□□ -2.08
USP53-202ENST00000450251 GALNT14Q96FL9 552 aa2.03□□□□□ -2.08
USP53-202ENST00000450251 ZNF845Q96IR2 970 aaPredicted RBP2.03□□□□□ -2.08
USP53-202ENST00000450251 RHOVQ96L33 236 aa2.03□□□□□ -2.08
USP53-202ENST00000450251 CIB3Q96Q77 187 aaPredicted RBP2.03□□□□□ -2.08
USP53-202ENST00000450251 MIEN1Q9BRT3 115 aa2.03□□□□□ -2.08
USP53-202ENST00000450251 ZPBPQ9BS86 351 aa2.03□□□□□ -2.08
USP53-202ENST00000450251 COLEC11Q9BWP8 271 aa2.03□□□□□ -2.08
USP53-202ENST00000450251 THSD7BQ9C0I4 1608 aa2.03□□□□□ -2.08
USP53-202ENST00000450251 CHODLQ9H9P2 273 aa2.03□□□□□ -2.08
USP53-202ENST00000450251 APOBEC3GQ9HC16 384 aaKnown RBP2.03□□□□□ -2.08
USP53-202ENST00000450251 ZFP64Q9NPA5 681 aa2.03□□□□□ -2.08
USP53-202ENST00000450251 TREX1Q9NSU2 369 aa2.03□□□□□ -2.08
USP53-202ENST00000450251 GRHPRQ9UBQ7 328 aa2.03□□□□□ -2.08
USP53-202ENST00000450251 PLEKHB1Q9UF11 243 aaPredicted RBP2.03□□□□□ -2.08
USP53-202ENST00000450251 OR14J1Q9UGF5 321 aa2.03□□□□□ -2.08
USP53-202ENST00000450251 MUTYHQ9UIF7 546 aa2.03□□□□□ -2.08
USP53-202ENST00000450251 KCND3Q9UK17 655 aa2.03□□□□□ -2.08
USP53-202ENST00000450251 CLEC4EQ9ULY5 219 aa2.03□□□□□ -2.08
USP53-202ENST00000450251 PIN4Q9Y237 131 aaKnown RBP2.03□□□□□ -2.08
USP53-202ENST00000450251 HEBP2Q9Y5Z4 205 aa2.03□□□□□ -2.08
USP53-202ENST00000450251 TEX50A0A1B0GTY4 177 aa2.03□□□□□ -2.08
USP53-202ENST00000450251 MEX3AA1L020 520 aaKnown RBP2.03□□□□□ -2.08
USP53-202ENST00000450251 TMX2-CTNND1H3BSU7 103 aa2.03□□□□□ -2.08
USP53-202ENST00000450251 XRCC3O43542 346 aa2.03□□□□□ -2.08
USP53-202ENST00000450251 GRIN3BO60391 1043 aa2.03□□□□□ -2.08
USP53-202ENST00000450251 APBB3O95704 486 aa2.03□□□□□ -2.08
USP53-202ENST00000450251 CYB5R3P00387 301 aaPredicted RBP2.03□□□□□ -2.08
USP53-202ENST00000450251 PMP2P02689 132 aa2.03□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms