RNA–Protein interactions for RNA: ENST00000448183.6

NEDD9-204, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best)

Gene NEDD9, Length 4,934 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-204ENST00000448183 CCSO14618 274 aa7.16□□□□□ -1.26
NEDD9-204ENST00000448183 IMPA2O14732 288 aa7.16□□□□□ -1.26
NEDD9-204ENST00000448183 ST8SIA3O43173 380 aa7.16□□□□□ -1.26
NEDD9-204ENST00000448183 DOK2O60496 412 aa7.16□□□□□ -1.26
NEDD9-204ENST00000448183 PRAMEF4O60810 478 aa7.16□□□□□ -1.26
NEDD9-204ENST00000448183 SULT1C4O75897 302 aa7.16□□□□□ -1.26
NEDD9-204ENST00000448183 AADACP22760 399 aa7.16□□□□□ -1.26
NEDD9-204ENST00000448183 CD38P28907 300 aa7.16□□□□□ -1.26
NEDD9-204ENST00000448183 MAP2K6P52564 334 aa7.16□□□□□ -1.26
NEDD9-204ENST00000448183 DGCR2P98153 550 aa7.16□□□□□ -1.26
NEDD9-204ENST00000448183 CCSMST1Q4G0I0 132 aa7.16□□□□□ -1.26
NEDD9-204ENST00000448183 FJX1Q86VR8 437 aa7.16□□□□□ -1.26
NEDD9-204ENST00000448183 OR1S2Q8NGQ3 325 aa7.16□□□□□ -1.26
NEDD9-204ENST00000448183 NAT6Q93015 286 aa7.16□□□□□ -1.26
NEDD9-204ENST00000448183 ULBP3Q9BZM4 244 aa7.16□□□□□ -1.26
NEDD9-204ENST00000448183 TGIF2Q9GZN2 237 aa7.16□□□□□ -1.26
NEDD9-204ENST00000448183 OCEL1Q9H607 264 aa7.16□□□□□ -1.26
NEDD9-204ENST00000448183 HINT3Q9NQE9 182 aaKnown RBP7.16□□□□□ -1.26
NEDD9-204ENST00000448183 DUSP22Q9NRW4 184 aa7.16□□□□□ -1.26
NEDD9-204ENST00000448183 GHRLQ9UBU3 117 aa7.16□□□□□ -1.26
NEDD9-204ENST00000448183 GPR160Q9UJ42 338 aa7.16□□□□□ -1.26
NEDD9-204ENST00000448183 GAB2Q9UQC2 676 aa7.16□□□□□ -1.26
NEDD9-204ENST00000448183 B3GALT5Q9Y2C3 310 aa7.16□□□□□ -1.26
NEDD9-204ENST00000448183 PCDHGA5Q9Y5G8 931 aa7.16□□□□□ -1.26
NEDD9-204ENST00000448183 USP54Q70EL1 1684 aa7.16□□□□□ -1.26
NEDD9-204ENST00000448183 HSFX4A0A1B0GTS1 333 aaPredicted RBP7.16□□□□□ -1.26
NEDD9-204ENST00000448183 HSFX3A0A1B0GWH4 333 aaPredicted RBP7.16□□□□□ -1.26
NEDD9-204ENST00000448183 CA3P07451 260 aa7.16□□□□□ -1.26
NEDD9-204ENST00000448183 GABRB1P18505 474 aa7.16□□□□□ -1.26
NEDD9-204ENST00000448183 C9orf135Q5VTT2 229 aa7.16□□□□□ -1.26
NEDD9-204ENST00000448183 YOD1Q5VVQ6 348 aaPredicted RBP7.16□□□□□ -1.26
NEDD9-204ENST00000448183 ACSM5Q6NUN0 579 aa7.16□□□□□ -1.26
NEDD9-204ENST00000448183 RHOUQ7L0Q8 258 aa7.16□□□□□ -1.26
NEDD9-204ENST00000448183 SFT2D1Q8WV19 159 aa7.16□□□□□ -1.26
NEDD9-204ENST00000448183 KIRREL1Q96J84 757 aa7.16□□□□□ -1.26
NEDD9-204ENST00000448183 ATP13A2Q9NQ11 1180 aa7.16□□□□□ -1.26
NEDD9-204ENST00000448183 NECAP2Q9NVZ3 263 aa7.16□□□□□ -1.26
NEDD9-204ENST00000448183 CGGBP1Q9UFW8 167 aaPredicted RBP7.16□□□□□ -1.26
NEDD9-204ENST00000448183 HRH3Q9Y5N1 445 aa7.16□□□□□ -1.26
NEDD9-204ENST00000448183 F6UZH7 168 aa7.15□□□□□ -1.26
NEDD9-204ENST00000448183 ZNF195O14628 629 aa7.15□□□□□ -1.26
NEDD9-204ENST00000448183 TAAR5O14804 337 aa7.15□□□□□ -1.26
NEDD9-204ENST00000448183 B4GALT3O60512 393 aa7.15□□□□□ -1.26
NEDD9-204ENST00000448183 CTNSO60931 367 aa7.15□□□□□ -1.26
NEDD9-204ENST00000448183 MT-ATP6P00846 226 aa7.15□□□□□ -1.26
NEDD9-204ENST00000448183 OR13C7P0DN81 318 aa7.15□□□□□ -1.26
NEDD9-204ENST00000448183 NID1P14543 1247 aa7.15□□□□□ -1.26
NEDD9-204ENST00000448183 ACHEP22303 614 aa7.15□□□□□ -1.26
NEDD9-204ENST00000448183 GABRA2P47869 451 aa7.15□□□□□ -1.26
NEDD9-204ENST00000448183 ARG2P78540 354 aa7.15□□□□□ -1.26
NEDD9-204ENST00000448183 ACVR1Q04771 509 aa7.15□□□□□ -1.26
NEDD9-204ENST00000448183 EEF1A2Q05639 463 aaKnown RBP7.15□□□□□ -1.26
NEDD9-204ENST00000448183 ZNF750Q32MQ0 723 aa7.15□□□□□ -1.26
NEDD9-204ENST00000448183 TOR2AQ5JU69 321 aa7.15□□□□□ -1.26
NEDD9-204ENST00000448183 ACOT7LQ6ZUV0 252 aa7.15□□□□□ -1.26
NEDD9-204ENST00000448183 C1orf87Q8N0U7 546 aa7.15□□□□□ -1.26
NEDD9-204ENST00000448183 LILRA3Q8N6C8 439 aaPredicted RBP7.15□□□□□ -1.26
NEDD9-204ENST00000448183 ZNF775Q96BV0 537 aaPredicted RBP7.15□□□□□ -1.26
NEDD9-204ENST00000448183 STACQ99469 402 aa7.15□□□□□ -1.26
NEDD9-204ENST00000448183 ELF4Q99607 663 aaPredicted RBP7.15□□□□□ -1.26
NEDD9-204ENST00000448183 SLC25A32Q9H2D1 315 aa7.15□□□□□ -1.26
NEDD9-204ENST00000448183 CHST2Q9Y4C5 530 aa7.15□□□□□ -1.26
NEDD9-204ENST00000448183 NAV1Q8NEY1 1877 aa7.15□□□□□ -1.26
NEDD9-204ENST00000448183 PKD1L3Q7Z443 1732 aa7.15□□□□□ -1.26
NEDD9-204ENST00000448183 PRSS44E7EML9 344 aa7.15□□□□□ -1.26
NEDD9-204ENST00000448183 ABHD16AO95870 558 aa7.15□□□□□ -1.26
NEDD9-204ENST00000448183 ZDHHC11BP0C7U3 371 aa7.15□□□□□ -1.26
NEDD9-204ENST00000448183 POU3F3P20264 500 aaPredicted RBP7.15□□□□□ -1.26
NEDD9-204ENST00000448183 S100A7P31151 101 aa7.15□□□□□ -1.26
NEDD9-204ENST00000448183 GJA4P35212 333 aa7.15□□□□□ -1.26
NEDD9-204ENST00000448183 EVX1P49640 407 aa7.15□□□□□ -1.26
NEDD9-204ENST00000448183 PHLDA2Q53GA4 152 aa7.15□□□□□ -1.26
NEDD9-204ENST00000448183 DHRS4L2Q6PKH6 230 aa7.15□□□□□ -1.26
NEDD9-204ENST00000448183 ZNF620Q6ZNG0 422 aa7.15□□□□□ -1.26
NEDD9-204ENST00000448183 DCXRQ7Z4W1 244 aa7.15□□□□□ -1.26
NEDD9-204ENST00000448183 NAA40Q86UY6 237 aa7.15□□□□□ -1.26
NEDD9-204ENST00000448183 ADIPOR2Q86V24 386 aa7.15□□□□□ -1.26
NEDD9-204ENST00000448183 TMEM99Q8N816 258 aa7.15□□□□□ -1.26
NEDD9-204ENST00000448183 SUMF1Q8NBK3 374 aa7.15□□□□□ -1.26
NEDD9-204ENST00000448183 OR13C8Q8NGS7 320 aa7.15□□□□□ -1.26
NEDD9-204ENST00000448183 OR2G3Q8NGZ4 309 aa7.15□□□□□ -1.26
NEDD9-204ENST00000448183 NUDT8Q8WV74 236 aa7.15□□□□□ -1.26
NEDD9-204ENST00000448183 DUSP23Q9BVJ7 150 aa7.15□□□□□ -1.26
NEDD9-204ENST00000448183 ZCCHC4Q9H5U6 513 aa7.15□□□□□ -1.26
NEDD9-204ENST00000448183 CMC2Q9NRP2 79 aa7.15□□□□□ -1.26
NEDD9-204ENST00000448183 SLC25A37Q9NYZ2 338 aa7.15□□□□□ -1.26
NEDD9-204ENST00000448183 LHX6Q9UPM6 363 aa7.15□□□□□ -1.26
NEDD9-204ENST00000448183 MMACHCQ9Y4U1 282 aa7.15□□□□□ -1.26
NEDD9-204ENST00000448183 URGCP-MRPS24S4R325 110 aa7.15□□□□□ -1.26
NEDD9-204ENST00000448183 ZFP92A6NM28 416 aa7.15□□□□□ -1.27
NEDD9-204ENST00000448183 HSPB6O14558 160 aa7.15□□□□□ -1.27
NEDD9-204ENST00000448183 EIF1BO60739 113 aaKnown RBP7.15□□□□□ -1.27
NEDD9-204ENST00000448183 JTBO76095 146 aa7.15□□□□□ -1.27
NEDD9-204ENST00000448183 BCL6P41182 706 aa7.15□□□□□ -1.27
NEDD9-204ENST00000448183 SLC19A1P41440 591 aa7.15□□□□□ -1.27
NEDD9-204ENST00000448183 MRPL19P49406 292 aaKnown RBP7.15□□□□□ -1.27
NEDD9-204ENST00000448183 RAB11AP62491 216 aa7.15□□□□□ -1.27
NEDD9-204ENST00000448183 DEFB103AP81534 67 aa7.15□□□□□ -1.27
NEDD9-204ENST00000448183 PAQR6Q6TCH4 344 aa7.15□□□□□ -1.27
NEDD9-204ENST00000448183 NAXDQ8IW45 347 aa7.15□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms