RNA–Protein interactions for RNA: ENST00000447734.5

PMS1-216, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5

Gene PMS1, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-216ENST00000447734 CTRCQ99895 268 aa3.06□□□□□ -1.92
PMS1-216ENST00000447734 RARRES2Q99969 163 aa3.06□□□□□ -1.92
PMS1-216ENST00000447734 CNPY3Q9BT09 278 aa3.06□□□□□ -1.92
PMS1-216ENST00000447734 ANKRD30BQ9BXX2 1392 aa3.06□□□□□ -1.92
PMS1-216ENST00000447734 MRM3Q9HC36 420 aaKnown RBP3.06□□□□□ -1.92
PMS1-216ENST00000447734 FANCIQ9NVI1 1328 aa3.06□□□□□ -1.92
PMS1-216ENST00000447734 NECAP2Q9NVZ3 263 aa3.06□□□□□ -1.92
PMS1-216ENST00000447734 RBAKQ9NYW8 714 aaPredicted RBP3.06□□□□□ -1.92
PMS1-216ENST00000447734 OR1A1Q9P1Q5 309 aa3.06□□□□□ -1.92
PMS1-216ENST00000447734 JCADQ9P266 1359 aa3.06□□□□□ -1.92
PMS1-216ENST00000447734 GNPTGQ9UJJ9 305 aa3.06□□□□□ -1.92
PMS1-216ENST00000447734 NXT1Q9UKK6 140 aaKnown RBP3.06□□□□□ -1.92
PMS1-216ENST00000447734 HYOU1Q9Y4L1 999 aa3.06□□□□□ -1.92
PMS1-216ENST00000447734 URGCP-MRPS24S4R325 110 aa3.06□□□□□ -1.92
PMS1-216ENST00000447734 CACNA1IQ9P0X4 2223 aa3.05□□□□□ -1.92
PMS1-216ENST00000447734 LRPPRCP42704 1394 aaKnown RBP3.05□□□□□ -1.92
PMS1-216ENST00000447734 IGKV1D-8A0A087WSZ0 117 aa3.05□□□□□ -1.92
PMS1-216ENST00000447734 A0A1B0GUV1 79 aa3.05□□□□□ -1.92
PMS1-216ENST00000447734 HACD1B0YJ81 288 aa3.05□□□□□ -1.92
PMS1-216ENST00000447734 FAM72CH0Y354 149 aa3.05□□□□□ -1.92
PMS1-216ENST00000447734 ITGB1BP1O14713 200 aa3.05□□□□□ -1.92
PMS1-216ENST00000447734 FKBP6O75344 327 aa3.05□□□□□ -1.92
PMS1-216ENST00000447734 EIF3GO75821 320 aaKnown RBP eCLIP3.05□□□□□ -1.92
PMS1-216ENST00000447734 ZMPSTE24O75844 475 aa3.05□□□□□ -1.92
PMS1-216ENST00000447734 DUS4LO95620 317 aaKnown RBP3.05□□□□□ -1.92
PMS1-216ENST00000447734 LDOC1O95751 146 aaPredicted RBP3.05□□□□□ -1.92
PMS1-216ENST00000447734 ZNF250P15622 560 aa3.05□□□□□ -1.92
PMS1-216ENST00000447734 IGHV1-2P23083 117 aa3.05□□□□□ -1.92
PMS1-216ENST00000447734 TIMP3P35625 211 aa3.05□□□□□ -1.92
PMS1-216ENST00000447734 KIR2DS2P43631 304 aa3.05□□□□□ -1.92
PMS1-216ENST00000447734 UGT2B15P54855 530 aa3.05□□□□□ -1.92
PMS1-216ENST00000447734 ERVPABLB-1P60509 514 aa3.05□□□□□ -1.92
PMS1-216ENST00000447734 ERVFC1-1P60608 527 aa3.05□□□□□ -1.92
PMS1-216ENST00000447734 UBE2KP61086 200 aa3.05□□□□□ -1.92
PMS1-216ENST00000447734 VSNL1P62760 191 aa3.05□□□□□ -1.92
PMS1-216ENST00000447734 GNB1P62873 340 aa3.05□□□□□ -1.92
PMS1-216ENST00000447734 SLC35B1P78383 322 aa3.05□□□□□ -1.92
PMS1-216ENST00000447734 CALCOCO2Q13137 446 aa3.05□□□□□ -1.92
PMS1-216ENST00000447734 DGCR6Q14129 220 aa3.05□□□□□ -1.92
PMS1-216ENST00000447734 GGTLC2Q14390 218 aa3.05□□□□□ -1.92
PMS1-216ENST00000447734 C5orf64Q2M2E5 130 aa3.05□□□□□ -1.92
PMS1-216ENST00000447734 ZNF876PQ49A33 203 aa3.05□□□□□ -1.92
PMS1-216ENST00000447734 KLF17Q5JT82 389 aaPredicted RBP3.05□□□□□ -1.92
PMS1-216ENST00000447734 VAX1Q5SQQ9 334 aa3.05□□□□□ -1.92
PMS1-216ENST00000447734 FAM72AQ5TYM5 149 aa3.05□□□□□ -1.92
PMS1-216ENST00000447734 AWAT2Q6E213 333 aa3.05□□□□□ -1.92
PMS1-216ENST00000447734 OR5M10Q6IEU7 315 aa3.05□□□□□ -1.92
PMS1-216ENST00000447734 FAM72DQ6L9T8 149 aa3.05□□□□□ -1.92
PMS1-216ENST00000447734 C1orf94Q6P1W5 598 aa3.05□□□□□ -1.92
PMS1-216ENST00000447734 TMIGD1Q6UXZ0 262 aa3.05□□□□□ -1.92
PMS1-216ENST00000447734 TPGS1Q6ZTW0 290 aa3.05□□□□□ -1.92
PMS1-216ENST00000447734 ZNF571Q7Z3V5 609 aaPredicted RBP3.05□□□□□ -1.92
PMS1-216ENST00000447734 UNC93AQ86WB7 457 aa3.05□□□□□ -1.92
PMS1-216ENST00000447734 FAM72BQ86X60 149 aa3.05□□□□□ -1.92
PMS1-216ENST00000447734 RDH10Q8IZV5 341 aa3.05□□□□□ -1.92
PMS1-216ENST00000447734 VKORC1L1Q8N0U8 176 aa3.05□□□□□ -1.92
PMS1-216ENST00000447734 ZNF740Q8NDX6 193 aa3.05□□□□□ -1.92
PMS1-216ENST00000447734 OR2AP1Q8NGE2 309 aa3.05□□□□□ -1.92
PMS1-216ENST00000447734 OR2A12Q8NGT7 310 aa3.05□□□□□ -1.92
PMS1-216ENST00000447734 OR6K6Q8NGW6 343 aa3.05□□□□□ -1.92
PMS1-216ENST00000447734 EEF1AKMT3Q96AZ1 226 aa3.05□□□□□ -1.92
PMS1-216ENST00000447734 MED8Q96G25 268 aa3.05□□□□□ -1.92
PMS1-216ENST00000447734 NOL4LQ96MY1 436 aaPredicted RBP3.05□□□□□ -1.92
PMS1-216ENST00000447734 SERPINB11Q96P15 392 aa3.05□□□□□ -1.92
PMS1-216ENST00000447734 ATF6BQ99941 703 aa3.05□□□□□ -1.92
PMS1-216ENST00000447734 C7orf50Q9BRJ6 194 aaKnown RBP3.05□□□□□ -1.92
PMS1-216ENST00000447734 NAT9Q9BTE0 207 aa3.05□□□□□ -1.92
PMS1-216ENST00000447734 CCDC28BQ9BUN5 200 aa3.05□□□□□ -1.92
PMS1-216ENST00000447734 HES7Q9BYE0 225 aa3.05□□□□□ -1.92
PMS1-216ENST00000447734 SRXN1Q9BYN0 137 aa3.05□□□□□ -1.92
PMS1-216ENST00000447734 DRC3Q9H069 523 aa3.05□□□□□ -1.92
PMS1-216ENST00000447734 NXF3Q9H4D5 531 aaKnown RBP3.05□□□□□ -1.92
PMS1-216ENST00000447734 CTPS2Q9NRF8 586 aa3.05□□□□□ -1.92
PMS1-216ENST00000447734 SDHAF3Q9NRP4 125 aa3.05□□□□□ -1.92
PMS1-216ENST00000447734 SENP1Q9P0U3 644 aa3.05□□□□□ -1.92
PMS1-216ENST00000447734 ASIC3Q9UHC3 531 aa3.05□□□□□ -1.92
PMS1-216ENST00000447734 SCML1Q9UN30 329 aa3.05□□□□□ -1.92
PMS1-216ENST00000447734 PPIL1Q9Y3C6 166 aa3.05□□□□□ -1.92
PMS1-216ENST00000447734 TSSC4Q9Y5U2 329 aaPredicted RBP3.05□□□□□ -1.92
PMS1-216ENST00000447734 PUS1Q9Y606 427 aaKnown RBP eCLIP3.05□□□□□ -1.92
PMS1-216ENST00000447734 MROH7Q68CQ1 1323 aa3.04□□□□□ -1.92
PMS1-216ENST00000447734 IGHV3-16A0A0C4DH30 117 aa3.04□□□□□ -1.92
PMS1-216ENST00000447734 ZNF816-ZNF321PA0A0X1KG74 233 aa3.04□□□□□ -1.92
PMS1-216ENST00000447734 RBMY1BA6NDE4 496 aaKnown RBP3.04□□□□□ -1.92
PMS1-216ENST00000447734 RBMY1EA6NEQ0 496 aaKnown RBP3.04□□□□□ -1.92
PMS1-216ENST00000447734 RPL37AP8A6NKH3 93 aa3.04□□□□□ -1.92
PMS1-216ENST00000447734 FAM220BPB1ANY3 271 aa3.04□□□□□ -1.92
PMS1-216ENST00000447734 E9PAM4 449 aa3.04□□□□□ -1.92
PMS1-216ENST00000447734 F6UB75 175 aa3.04□□□□□ -1.92
PMS1-216ENST00000447734 ACOT8O14734 319 aa3.04□□□□□ -1.92
PMS1-216ENST00000447734 RAD51BO15315 384 aa3.04□□□□□ -1.92
PMS1-216ENST00000447734 CATP04040 527 aaKnown RBP3.04□□□□□ -1.92
PMS1-216ENST00000447734 ARG1P05089 322 aa3.04□□□□□ -1.92
PMS1-216ENST00000447734 STSP08842 583 aa3.04□□□□□ -1.92
PMS1-216ENST00000447734 RBMY1DP0C7P1 496 aaKnown RBP3.04□□□□□ -1.92
PMS1-216ENST00000447734 OCMP0CE72 109 aaPredicted RBP3.04□□□□□ -1.92
PMS1-216ENST00000447734 RBMY1A1P0DJD3 496 aaKnown RBP3.04□□□□□ -1.92
PMS1-216ENST00000447734 CT45A6P0DMU7 189 aa3.04□□□□□ -1.92
PMS1-216ENST00000447734 CT45A5P0DMU8 189 aa3.04□□□□□ -1.92
PMS1-216ENST00000447734 CT45A7P0DMV0 189 aa3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms