RNA–Protein interactions for RNA: ENST00000447232.6

PMS1-215, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-215ENST00000447232 VANGL1Q8TAA9 524 aaPredicted RBP2.61□□□□□ -1.99
PMS1-215ENST00000447232 SLC7A13Q8TCU3 470 aa2.61□□□□□ -1.99
PMS1-215ENST00000447232 C1orf54Q8WWF1 131 aa2.61□□□□□ -1.99
PMS1-215ENST00000447232 TMEM234Q8WY98 164 aa2.61□□□□□ -1.99
PMS1-215ENST00000447232 SAMD8Q96LT4 415 aa2.61□□□□□ -1.99
PMS1-215ENST00000447232 AMDHD1Q96NU7 426 aa2.61□□□□□ -1.99
PMS1-215ENST00000447232 GPR78Q96P69 363 aa2.61□□□□□ -1.99
PMS1-215ENST00000447232 FRG2BQ96QU4 278 aa2.61□□□□□ -1.99
PMS1-215ENST00000447232 OR8B2Q96RD0 313 aa2.61□□□□□ -1.99
PMS1-215ENST00000447232 TMEM246Q9BRR3 403 aa2.61□□□□□ -1.99
PMS1-215ENST00000447232 THUMPD3Q9BV44 507 aaKnown RBP2.61□□□□□ -1.99
PMS1-215ENST00000447232 GLIPR2Q9H4G4 154 aa2.61□□□□□ -1.99
PMS1-215ENST00000447232 NHEJ1Q9H9Q4 299 aaPredicted RBP2.61□□□□□ -1.99
PMS1-215ENST00000447232 POPDC3Q9HBV1 291 aa2.61□□□□□ -1.99
PMS1-215ENST00000447232 XAB2Q9HCS7 855 aaKnown RBP2.61□□□□□ -1.99
PMS1-215ENST00000447232 KCNK9Q9NPC2 374 aa2.61□□□□□ -1.99
PMS1-215ENST00000447232 TCF7L2Q9NQB0 619 aa2.61□□□□□ -1.99
PMS1-215ENST00000447232 CYSLTR2Q9NS75 346 aa2.61□□□□□ -1.99
PMS1-215ENST00000447232 C20orf141Q9NUB4 165 aa2.61□□□□□ -1.99
PMS1-215ENST00000447232 H2AFY2Q9P0M6 372 aaPredicted RBP2.61□□□□□ -1.99
PMS1-215ENST00000447232 FBXL3Q9UKT7 428 aa2.61□□□□□ -1.99
PMS1-215ENST00000447232 SORL1Q92673 2214 aa2.61□□□□□ -1.99
PMS1-215ENST00000447232 HMCN2Q8NDA2 5059 aa2.61□□□□□ -1.99
PMS1-215ENST00000447232 GTPBP1O00178 669 aaKnown RBP2.6□□□□□ -1.99
PMS1-215ENST00000447232 ANKRD28O15084 1053 aa2.6□□□□□ -1.99
PMS1-215ENST00000447232 LCKP06239 509 aa2.6□□□□□ -1.99
PMS1-215ENST00000447232 UBL4AP11441 157 aa2.6□□□□□ -1.99
PMS1-215ENST00000447232 PRPS2P11908 318 aa2.6□□□□□ -1.99
PMS1-215ENST00000447232 DRD4P21917 467 aa2.6□□□□□ -1.99
PMS1-215ENST00000447232 STX2P32856 288 aa2.6□□□□□ -1.99
PMS1-215ENST00000447232 LSP1P33241 339 aa2.6□□□□□ -1.99
PMS1-215ENST00000447232 LIPAP38571 399 aa2.6□□□□□ -1.99
PMS1-215ENST00000447232 PSMB10P40306 273 aa2.6□□□□□ -1.99
PMS1-215ENST00000447232 THBS3P49746 956 aa2.6□□□□□ -1.99
PMS1-215ENST00000447232 CCR4P51679 360 aa2.6□□□□□ -1.99
PMS1-215ENST00000447232 CDH13P55290 713 aa2.6□□□□□ -1.99
PMS1-215ENST00000447232 UCP2P55851 309 aa2.6□□□□□ -1.99
PMS1-215ENST00000447232 RAB1AP62820 205 aa2.6□□□□□ -1.99
PMS1-215ENST00000447232 TNFAIP6P98066 277 aaPredicted RBP2.6□□□□□ -1.99
PMS1-215ENST00000447232 RBBP4Q09028 425 aa2.6□□□□□ -1.99
PMS1-215ENST00000447232 SNX1Q13596 522 aa2.6□□□□□ -1.99
PMS1-215ENST00000447232 RASA2Q15283 850 aa2.6□□□□□ -1.99
PMS1-215ENST00000447232 RBMY1FQ15415 496 aaKnown RBP2.6□□□□□ -1.99
PMS1-215ENST00000447232 ZNF404Q494X3 552 aa2.6□□□□□ -1.99
PMS1-215ENST00000447232 CCDC121Q6ZUS5 278 aa2.6□□□□□ -1.99
PMS1-215ENST00000447232 ZC3HC1Q86WB0 502 aaKnown RBP2.6□□□□□ -1.99
PMS1-215ENST00000447232 LRRC57Q8N9N7 239 aa2.6□□□□□ -1.99
PMS1-215ENST00000447232 RFWD2Q8NHY2 731 aa2.6□□□□□ -1.99
PMS1-215ENST00000447232 MYDGFQ969H8 173 aa2.6□□□□□ -1.99
PMS1-215ENST00000447232 CCDC42Q96M95 316 aa2.6□□□□□ -1.99
PMS1-215ENST00000447232 ACTRT3Q9BYD9 372 aa2.6□□□□□ -1.99
PMS1-215ENST00000447232 BCL2L14Q9BZR8 327 aa2.6□□□□□ -1.99
PMS1-215ENST00000447232 HOXD1Q9GZZ0 328 aa2.6□□□□□ -1.99
PMS1-215ENST00000447232 EQTNQ9NQ60 294 aa2.6□□□□□ -1.99
PMS1-215ENST00000447232 TAS2R7Q9NYW3 318 aa2.6□□□□□ -1.99
PMS1-215ENST00000447232 NUDT4Q9NZJ9 180 aa2.6□□□□□ -1.99
PMS1-215ENST00000447232 PCDHGB4Q9UN71 923 aa2.6□□□□□ -1.99
PMS1-215ENST00000447232 TFR2Q9UP52 801 aa2.6□□□□□ -1.99
PMS1-215ENST00000447232 ZNF256Q9Y2P7 627 aaPredicted RBP2.6□□□□□ -1.99
PMS1-215ENST00000447232 DTNAQ9Y4J8 743 aa2.6□□□□□ -1.99
PMS1-215ENST00000447232 TNFRSF18Q9Y5U5 241 aa2.6□□□□□ -1.99
PMS1-215ENST00000447232 KIAA2026Q5HYC2 2103 aa2.6□□□□□ -1.99
PMS1-215ENST00000447232 TCRBV4S1A1TA0A5B7 111 aa2.6□□□□□ -1.99
PMS1-215ENST00000447232 PLSCR5A0PG75 271 aa2.6□□□□□ -1.99
PMS1-215ENST00000447232 FBP2O00757 339 aa2.6□□□□□ -1.99
PMS1-215ENST00000447232 NPFFO15130 113 aa2.6□□□□□ -1.99
PMS1-215ENST00000447232 ZNF208O43345 1280 aa2.6□□□□□ -1.99
PMS1-215ENST00000447232 SYNGR1O43759 233 aa2.6□□□□□ -1.99
PMS1-215ENST00000447232 AKR7A3O95154 331 aa2.6□□□□□ -1.99
PMS1-215ENST00000447232 ESRRBO95718 433 aa2.6□□□□□ -1.99
PMS1-215ENST00000447232 RAB36O95755 333 aa2.6□□□□□ -1.99
PMS1-215ENST00000447232 PGAM1P18669 254 aa2.6□□□□□ -1.99
PMS1-215ENST00000447232 GTF2E2P29084 291 aaKnown RBP2.6□□□□□ -1.99
PMS1-215ENST00000447232 MPV17P39210 176 aa2.6□□□□□ -1.99
PMS1-215ENST00000447232 LUMP51884 338 aaPredicted RBP2.6□□□□□ -1.99
PMS1-215ENST00000447232 ATP12AP54707 1039 aa2.6□□□□□ -1.99
PMS1-215ENST00000447232 ATP6V0D1P61421 351 aa2.6□□□□□ -1.99
PMS1-215ENST00000447232 RAE1P78406 368 aaKnown RBP2.6□□□□□ -1.99
PMS1-215ENST00000447232 TBX2Q13207 712 aaPredicted RBP2.6□□□□□ -1.99
PMS1-215ENST00000447232 CAMK2DQ13557 499 aa2.6□□□□□ -1.99
PMS1-215ENST00000447232 LY6EQ16553 131 aa2.6□□□□□ -1.99
PMS1-215ENST00000447232 AANATQ16613 207 aa2.6□□□□□ -1.99
PMS1-215ENST00000447232 KCTD19Q17RG1 926 aaPredicted RBP2.6□□□□□ -1.99
PMS1-215ENST00000447232 DRICH1Q6PGQ1 229 aaPredicted RBP2.6□□□□□ -1.99
PMS1-215ENST00000447232 KCTD18Q6PI47 426 aaPredicted RBP2.6□□□□□ -1.99
PMS1-215ENST00000447232 GRINAQ7Z429 371 aa2.6□□□□□ -1.99
PMS1-215ENST00000447232 GPAT4Q86UL3 456 aa2.6□□□□□ -1.99
PMS1-215ENST00000447232 C1orf52Q8N6N3 182 aaKnown RBP2.6□□□□□ -1.99
PMS1-215ENST00000447232 PIK3C3Q8NEB9 887 aa2.6□□□□□ -1.99
PMS1-215ENST00000447232 CERS2Q96G23 380 aa2.6□□□□□ -1.99
PMS1-215ENST00000447232 P2RX4Q99571 388 aa2.6□□□□□ -1.99
PMS1-215ENST00000447232 SSX3Q99909 188 aa2.6□□□□□ -1.99
PMS1-215ENST00000447232 CDCA4Q9BXL8 241 aa2.6□□□□□ -1.99
PMS1-215ENST00000447232 NAT10Q9H0A0 1025 aaKnown RBP2.6□□□□□ -1.99
PMS1-215ENST00000447232 RMND5AQ9H871 391 aa2.6□□□□□ -1.99
PMS1-215ENST00000447232 ANO10Q9NW15 660 aa2.6□□□□□ -1.99
PMS1-215ENST00000447232 B3GAT1Q9P2W7 334 aa2.6□□□□□ -1.99
PMS1-215ENST00000447232 SCOCQ9UIL1 159 aa2.6□□□□□ -1.99
PMS1-215ENST00000447232 SLC12A4Q9UP95 1085 aa2.6□□□□□ -1.99
PMS1-215ENST00000447232 PPP1R3CQ9UQK1 317 aa2.6□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms