RNA–Protein interactions for RNA: ENST00000446349.5

PTPN3-204, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,630 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-204ENST00000446349 FUT4P22083 530 aa7.84□□□□□ -1.15
PTPN3-204ENST00000446349 SDHAP31040 664 aa7.84□□□□□ -1.15
PTPN3-204ENST00000446349 PPT1P50897 306 aa7.84□□□□□ -1.15
PTPN3-204ENST00000446349 CTU2Q2VPK5 515 aaKnown RBP7.84□□□□□ -1.15
PTPN3-204ENST00000446349 UBE2UQ5VVX9 321 aa7.84□□□□□ -1.15
PTPN3-204ENST00000446349 GDF7Q7Z4P5 450 aa7.84□□□□□ -1.15
PTPN3-204ENST00000446349 MBOAT4Q96T53 435 aa7.84□□□□□ -1.15
PTPN3-204ENST00000446349 UCK1Q9HA47 277 aa7.84□□□□□ -1.15
PTPN3-204ENST00000446349 SCPEP1Q9HB40 452 aa7.84□□□□□ -1.15
PTPN3-204ENST00000446349 BCL2L10Q9HD36 194 aa7.84□□□□□ -1.15
PTPN3-204ENST00000446349 TRGV5A0A0B4J1U4 118 aa7.84□□□□□ -1.15
PTPN3-204ENST00000446349 RBP2P50120 134 aa7.84□□□□□ -1.15
PTPN3-204ENST00000446349 RAP2BP61225 183 aa7.84□□□□□ -1.15
PTPN3-204ENST00000446349 NUFIP2Q7Z417 695 aaKnown RBP7.84□□□□□ -1.15
PTPN3-204ENST00000446349 NAA40Q86UY6 237 aa7.84□□□□□ -1.15
PTPN3-204ENST00000446349 CATSPERDQ86XM0 798 aa7.84□□□□□ -1.15
PTPN3-204ENST00000446349 ANKRD13BQ86YJ7 626 aa7.84□□□□□ -1.15
PTPN3-204ENST00000446349 NUDT22Q9BRQ3 303 aa7.84□□□□□ -1.15
PTPN3-204ENST00000446349 FN3KRPQ9HA64 309 aa7.84□□□□□ -1.15
PTPN3-204ENST00000446349 PPIL1Q9Y3C6 166 aa7.84□□□□□ -1.15
PTPN3-204ENST00000446349 WNK3Q9BYP7 1800 aa7.84□□□□□ -1.15
PTPN3-204ENST00000446349 KIF13BQ9NQT8 1826 aa7.84□□□□□ -1.15
PTPN3-204ENST00000446349 A0A0D9SG52 128 aa7.84□□□□□ -1.15
PTPN3-204ENST00000446349 TCRBV5S1A1TA0A578 114 aa7.84□□□□□ -1.15
PTPN3-204ENST00000446349 POM121BA6NF01 834 aa7.84□□□□□ -1.15
PTPN3-204ENST00000446349 I3L521 148 aa7.84□□□□□ -1.15
PTPN3-204ENST00000446349 FRS3O43559 492 aa7.84□□□□□ -1.15
PTPN3-204ENST00000446349 CNIH1O95406 144 aa7.84□□□□□ -1.15
PTPN3-204ENST00000446349 DRD5P21918 477 aa7.84□□□□□ -1.15
PTPN3-204ENST00000446349 SLC6A12P48065 614 aa7.84□□□□□ -1.15
PTPN3-204ENST00000446349 TLE4Q04727 773 aa7.84□□□□□ -1.15
PTPN3-204ENST00000446349 TRIP6Q15654 476 aaKnown RBP7.84□□□□□ -1.15
PTPN3-204ENST00000446349 TMEM236Q5W0B7 351 aa7.84□□□□□ -1.15
PTPN3-204ENST00000446349 ZNF836Q6ZNA1 936 aa7.84□□□□□ -1.15
PTPN3-204ENST00000446349 CFAP77Q6ZQR2 320 aa7.84□□□□□ -1.15
PTPN3-204ENST00000446349 RFPL4BQ6ZWI9 263 aa7.84□□□□□ -1.15
PTPN3-204ENST00000446349 SPACA9Q96E40 222 aaPredicted RBP7.84□□□□□ -1.15
PTPN3-204ENST00000446349 RNF170Q96K19 258 aa7.84□□□□□ -1.15
PTPN3-204ENST00000446349 SDF2Q99470 211 aa7.84□□□□□ -1.15
PTPN3-204ENST00000446349 SYNPO2LQ9H987 977 aa7.84□□□□□ -1.15
PTPN3-204ENST00000446349 EMCNQ9ULC0 261 aa7.84□□□□□ -1.15
PTPN3-204ENST00000446349 LSM5Q9Y4Y9 91 aaKnown RBP7.84□□□□□ -1.15
PTPN3-204ENST00000446349 GOSR2O14653 212 aa7.83□□□□□ -1.16
PTPN3-204ENST00000446349 TAPBPO15533 448 aa7.83□□□□□ -1.16
PTPN3-204ENST00000446349 PNLIPP16233 465 aa7.83□□□□□ -1.16
PTPN3-204ENST00000446349 CRHBPP24387 322 aa7.83□□□□□ -1.16
PTPN3-204ENST00000446349 CCL7P80098 99 aa7.83□□□□□ -1.16
PTPN3-204ENST00000446349 ZXDBP98169 803 aa7.83□□□□□ -1.16
PTPN3-204ENST00000446349 SMIM21Q3B7S5 101 aa7.83□□□□□ -1.16
PTPN3-204ENST00000446349 FCRLBQ6BAA4 426 aa7.83□□□□□ -1.16
PTPN3-204ENST00000446349 KCNIP4Q6PIL6 250 aa7.83□□□□□ -1.16
PTPN3-204ENST00000446349 MARCH3Q86UD3 253 aa7.83□□□□□ -1.16
PTPN3-204ENST00000446349 SIRT6Q8N6T7 355 aa7.83□□□□□ -1.16
PTPN3-204ENST00000446349 BCORP1Q8N888 145 aa7.83□□□□□ -1.16
PTPN3-204ENST00000446349 OR56B4Q8NH76 319 aa7.83□□□□□ -1.16
PTPN3-204ENST00000446349 OR2V1Q8NHB1 315 aa7.83□□□□□ -1.16
PTPN3-204ENST00000446349 OR10J5Q8NHC4 309 aa7.83□□□□□ -1.16
PTPN3-204ENST00000446349 MACROD1Q9BQ69 325 aa7.83□□□□□ -1.16
PTPN3-204ENST00000446349 NUDT16L1Q9BRJ7 211 aaKnown RBP7.83□□□□□ -1.16
PTPN3-204ENST00000446349 EMP3P54852 163 aa7.83□□□□□ -1.16
PTPN3-204ENST00000446349 PPP1CAP62136 330 aa7.83□□□□□ -1.16
PTPN3-204ENST00000446349 RPS18P62269 152 aaKnown RBP7.83□□□□□ -1.16
PTPN3-204ENST00000446349 FOXK2Q01167 660 aa7.83□□□□□ -1.16
PTPN3-204ENST00000446349 ZNF91Q05481 1191 aa7.83□□□□□ -1.16
PTPN3-204ENST00000446349 TOMM34Q15785 309 aaPredicted RBP7.83□□□□□ -1.16
PTPN3-204ENST00000446349 TRAT1Q6PIZ9 186 aa7.83□□□□□ -1.16
PTPN3-204ENST00000446349 CA13Q8N1Q1 262 aa7.83□□□□□ -1.16
PTPN3-204ENST00000446349 TFAP2CQ92754 450 aa7.83□□□□□ -1.16
PTPN3-204ENST00000446349 GCM1Q9NP62 436 aa7.83□□□□□ -1.16
PTPN3-204ENST00000446349 ATG2BQ96BY7 2078 aa7.83□□□□□ -1.16
PTPN3-204ENST00000446349 K7ESM1 405 aa7.83□□□□□ -1.16
PTPN3-204ENST00000446349 SLC16A6O15403 523 aa7.83□□□□□ -1.16
PTPN3-204ENST00000446349 TBXA2RP21731 343 aa7.83□□□□□ -1.16
PTPN3-204ENST00000446349 SLC14A1Q13336 389 aa7.83□□□□□ -1.16
PTPN3-204ENST00000446349 ZNF266Q14584 549 aa7.83□□□□□ -1.16
PTPN3-204ENST00000446349 SFRP5Q5T4F7 317 aa7.83□□□□□ -1.16
PTPN3-204ENST00000446349 KANSL1Q7Z3B3 1105 aa7.83□□□□□ -1.16
PTPN3-204ENST00000446349 ITPKCQ96DU7 683 aa7.83□□□□□ -1.16
PTPN3-204ENST00000446349 PSD2Q9BQI7 771 aa7.83□□□□□ -1.16
PTPN3-204ENST00000446349 NOX4Q9NPH5 578 aa7.83□□□□□ -1.16
PTPN3-204ENST00000446349 ADAMTS7Q9UKP4 1686 aa7.83□□□□□ -1.16
PTPN3-204ENST00000446349 ARPC4-TTLL3A0A0A6YYG9 625 aa7.83□□□□□ -1.16
PTPN3-204ENST00000446349 TMEM200CA6NKL6 621 aa7.83□□□□□ -1.16
PTPN3-204ENST00000446349 TNFRSF10AO00220 468 aa7.83□□□□□ -1.16
PTPN3-204ENST00000446349 HOXD4P09016 255 aaPredicted RBP7.83□□□□□ -1.16
PTPN3-204ENST00000446349 ZNF136P52737 540 aa7.83□□□□□ -1.16
PTPN3-204ENST00000446349 RAB5BP61020 215 aa7.83□□□□□ -1.16
PTPN3-204ENST00000446349 SPOCK1Q08629 439 aa7.83□□□□□ -1.16
PTPN3-204ENST00000446349 NFATC3Q12968 1075 aa7.83□□□□□ -1.16
PTPN3-204ENST00000446349 GK2Q14410 553 aaPredicted RBP7.83□□□□□ -1.16
PTPN3-204ENST00000446349 HES1Q14469 280 aa7.83□□□□□ -1.16
PTPN3-204ENST00000446349 GTDC1Q4AE62 458 aa7.83□□□□□ -1.16
PTPN3-204ENST00000446349 PLXDC2Q6UX71 529 aa7.83□□□□□ -1.16
PTPN3-204ENST00000446349 ESPNLQ6ZVH7 1005 aa7.83□□□□□ -1.16
PTPN3-204ENST00000446349 CYP4V2Q6ZWL3 525 aaPredicted RBP7.83□□□□□ -1.16
PTPN3-204ENST00000446349 PIWIL3Q7Z3Z3 882 aaKnown RBP7.83□□□□□ -1.16
PTPN3-204ENST00000446349 SLC35G3Q8N808 338 aa7.83□□□□□ -1.16
PTPN3-204ENST00000446349 ZFP41Q8N8Y5 198 aa7.83□□□□□ -1.16
PTPN3-204ENST00000446349 SMAP2Q8WU79 429 aaPredicted RBP7.83□□□□□ -1.16
PTPN3-204ENST00000446349 DCLRE1CQ96SD1 692 aaKnown RBP7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms