RNA–Protein interactions for RNA: ENST00000445654.2

SHANK2-209, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 3

Gene SHANK2, Length 522 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-209ENST00000445654 C3orf30Q96M34 536 aa11.72□□□□□ -0.53
SHANK2-209ENST00000445654 DCLRE1CQ96SD1 692 aaKnown RBP11.72□□□□□ -0.53
SHANK2-209ENST00000445654 RHOXF2Q9BQY4 288 aa11.72□□□□□ -0.53
SHANK2-209ENST00000445654 CHIAQ9BZP6 476 aa11.72□□□□□ -0.53
SHANK2-209ENST00000445654 NPHS2Q9NP85 383 aa11.72□□□□□ -0.53
SHANK2-209ENST00000445654 TMEM106BQ9NUM4 274 aa11.72□□□□□ -0.53
SHANK2-209ENST00000445654 BTNL2Q9UIR0 455 aa11.72□□□□□ -0.53
SHANK2-209ENST00000445654 RYR3Q15413 4870 aa11.71□□□□□ -0.53
SHANK2-209ENST00000445654 IGHV3OR16-10A0A075B7F0 116 aa11.71□□□□□ -0.53
SHANK2-209ENST00000445654 CCDC154A6NI56 674 aa11.71□□□□□ -0.53
SHANK2-209ENST00000445654 MS4A18H0YCH9 400 aa11.71□□□□□ -0.53
SHANK2-209ENST00000445654 IFNL4K9M1U5 179 aa11.71□□□□□ -0.53
SHANK2-209ENST00000445654 PATE4P0C8F1 98 aa11.71□□□□□ -0.53
SHANK2-209ENST00000445654 PRG2P13727 222 aa11.71□□□□□ -0.53
SHANK2-209ENST00000445654 MDH2P40926 338 aaKnown RBP11.71□□□□□ -0.53
SHANK2-209ENST00000445654 LOXL3P58215 753 aa11.71□□□□□ -0.53
SHANK2-209ENST00000445654 PROK1P58294 105 aa11.71□□□□□ -0.53
SHANK2-209ENST00000445654 MS4A18Q3C1V0 323 aa11.71□□□□□ -0.53
SHANK2-209ENST00000445654 SLC16A14Q7RTX9 510 aa11.71□□□□□ -0.53
SHANK2-209ENST00000445654 PAQR4Q8N4S7 273 aaPredicted RBP11.71□□□□□ -0.53
SHANK2-209ENST00000445654 ZNF283Q8N7M2 679 aa11.71□□□□□ -0.53
SHANK2-209ENST00000445654 OR10S1Q8NGN2 331 aa11.71□□□□□ -0.53
SHANK2-209ENST00000445654 LINC01006Q8NI28 216 aa11.71□□□□□ -0.53
SHANK2-209ENST00000445654 DNAJA4Q8WW22 397 aaPredicted RBP11.71□□□□□ -0.53
SHANK2-209ENST00000445654 RAB40AQ8WXH6 277 aa11.71□□□□□ -0.53
SHANK2-209ENST00000445654 SLC41A3Q96GZ6 507 aa11.71□□□□□ -0.53
SHANK2-209ENST00000445654 MAGEB18Q96M61 343 aa11.71□□□□□ -0.53
SHANK2-209ENST00000445654 CCDC115Q96NT0 180 aa11.71□□□□□ -0.53
SHANK2-209ENST00000445654 SSBP3Q9BWW4 388 aaPredicted RBP11.71□□□□□ -0.53
SHANK2-209ENST00000445654 KCNN2Q9H2S1 579 aa11.71□□□□□ -0.53
SHANK2-209ENST00000445654 MARCH7Q9H992 704 aa11.71□□□□□ -0.53
SHANK2-209ENST00000445654 PPCSQ9HAB8 311 aa11.71□□□□□ -0.53
SHANK2-209ENST00000445654 TNFRSF19Q9NS68 423 aa11.71□□□□□ -0.53
SHANK2-209ENST00000445654 SLC6A13Q9NSD5 602 aa11.71□□□□□ -0.53
SHANK2-209ENST00000445654 TMEM38BQ9NVV0 291 aa11.71□□□□□ -0.53
SHANK2-209ENST00000445654 THUMPD1Q9NXG2 353 aaKnown RBP11.71□□□□□ -0.53
SHANK2-209ENST00000445654 GLTPQ9NZD2 209 aa11.71□□□□□ -0.53
SHANK2-209ENST00000445654 SELENONQ9NZV5 590 aa11.71□□□□□ -0.53
SHANK2-209ENST00000445654 IGHV2-70DA0A0C4DH43 119 aa11.7□□□□□ -0.54
SHANK2-209ENST00000445654 A0A0G2JPF8 293 aa11.7□□□□□ -0.54
SHANK2-209ENST00000445654 MDFIC2A0A1B0GVS7 189 aa11.7□□□□□ -0.54
SHANK2-209ENST00000445654 HNRNPCL2B2RXH8 293 aa11.7□□□□□ -0.54
SHANK2-209ENST00000445654 HNRNPCL3B7ZW38 293 aa11.7□□□□□ -0.54
SHANK2-209ENST00000445654 SURF4O15260 269 aa11.7□□□□□ -0.54
SHANK2-209ENST00000445654 HNRNPCL1O60812 293 aaKnown RBP11.7□□□□□ -0.54
SHANK2-209ENST00000445654 HNRNPCL4P0DMR1 293 aa11.7□□□□□ -0.54
SHANK2-209ENST00000445654 CCL2P13500 99 aa11.7□□□□□ -0.54
SHANK2-209ENST00000445654 HLA-DOBP13765 273 aa11.7□□□□□ -0.54
SHANK2-209ENST00000445654 S100A3P33764 101 aa11.7□□□□□ -0.54
SHANK2-209ENST00000445654 KRTAP10-3P60369 221 aa11.7□□□□□ -0.54
SHANK2-209ENST00000445654 TNFAIP6P98066 277 aaPredicted RBP11.7□□□□□ -0.54
SHANK2-209ENST00000445654 HSF2Q03933 536 aa11.7□□□□□ -0.54
SHANK2-209ENST00000445654 FAM189A2Q15884 450 aa11.7□□□□□ -0.54
SHANK2-209ENST00000445654 MBNL2Q5VZF2 373 aaKnown RBP11.7□□□□□ -0.54
SHANK2-209ENST00000445654 SERPINA11Q86U17 422 aa11.7□□□□□ -0.54
SHANK2-209ENST00000445654 JAZF1Q86VZ6 243 aa11.7□□□□□ -0.54
SHANK2-209ENST00000445654 PTOV1Q86YD1 416 aa11.7□□□□□ -0.54
SHANK2-209ENST00000445654 RBM15BQ8NDT2 890 aaKnown RBP11.7□□□□□ -0.54
SHANK2-209ENST00000445654 VANGL1Q8TAA9 524 aaPredicted RBP11.7□□□□□ -0.54
SHANK2-209ENST00000445654 IPCEF1Q8WWN9 437 aaPredicted RBP11.7□□□□□ -0.54
SHANK2-209ENST00000445654 SAMD8Q96LT4 415 aa11.7□□□□□ -0.54
SHANK2-209ENST00000445654 PANX1Q96RD7 426 aa11.7□□□□□ -0.54
SHANK2-209ENST00000445654 MRPL39Q9NYK5 338 aaKnown RBP11.7□□□□□ -0.54
SHANK2-209ENST00000445654 KLHL14Q9P2G3 628 aa11.7□□□□□ -0.54
SHANK2-209ENST00000445654 G3V4G9 280 aa11.69□□□□□ -0.54
SHANK2-209ENST00000445654 DHHO43323 396 aa11.69□□□□□ -0.54
SHANK2-209ENST00000445654 PIP5K1CO60331 668 aa11.69□□□□□ -0.54
SHANK2-209ENST00000445654 HPRP00739 348 aa11.69□□□□□ -0.54
SHANK2-209ENST00000445654 AHCYP23526 432 aa11.69□□□□□ -0.54
SHANK2-209ENST00000445654 ECHS1P30084 290 aa11.69□□□□□ -0.54
SHANK2-209ENST00000445654 GNB2P62879 340 aa11.69□□□□□ -0.54
SHANK2-209ENST00000445654 SAMD5Q5TGI4 173 aa11.69□□□□□ -0.54
SHANK2-209ENST00000445654 GDPGP1Q6ZNW5 385 aa11.69□□□□□ -0.54
SHANK2-209ENST00000445654 LSRQ86X29 649 aaPredicted RBP11.69□□□□□ -0.54
SHANK2-209ENST00000445654 CLIP4Q8N3C7 705 aa11.69□□□□□ -0.54
SHANK2-209ENST00000445654 LSMEM1Q8N8F7 131 aa11.69□□□□□ -0.54
SHANK2-209ENST00000445654 HIPK4Q8NE63 616 aa11.69□□□□□ -0.54
SHANK2-209ENST00000445654 BHLHE22Q8NFJ8 381 aaPredicted RBP11.69□□□□□ -0.54
SHANK2-209ENST00000445654 OR6X1Q8NH79 312 aa11.69□□□□□ -0.54
SHANK2-209ENST00000445654 FGFBP3Q8TAT2 258 aa11.69□□□□□ -0.54
SHANK2-209ENST00000445654 GEMIN6Q8WXD5 167 aaKnown RBP11.69□□□□□ -0.54
SHANK2-209ENST00000445654 TMEM54Q969K7 222 aa11.69□□□□□ -0.54
SHANK2-209ENST00000445654 MARS2Q96GW9 593 aaKnown RBP11.69□□□□□ -0.54
SHANK2-209ENST00000445654 TXNDC15Q96J42 360 aa11.69□□□□□ -0.54
SHANK2-209ENST00000445654 SH3GL3Q99963 347 aa11.69□□□□□ -0.54
SHANK2-209ENST00000445654 MIOXQ9UGB7 285 aa11.69□□□□□ -0.54
SHANK2-209ENST00000445654 KIR2DS1A0A191URI9 304 aa11.68□□□□□ -0.54
SHANK2-209ENST00000445654 ZSCAN5BA6NJL1 495 aa11.68□□□□□ -0.54
SHANK2-209ENST00000445654 E9PBE3 544 aa11.68□□□□□ -0.54
SHANK2-209ENST00000445654 OR6A2O95222 327 aa11.68□□□□□ -0.54
SHANK2-209ENST00000445654 OPN1MWP04001 364 aa11.68□□□□□ -0.54
SHANK2-209ENST00000445654 MELTFP08582 738 aa11.68□□□□□ -0.54
SHANK2-209ENST00000445654 OPN1MW2P0DN77 364 aa11.68□□□□□ -0.54
SHANK2-209ENST00000445654 OPN1MW3P0DN78 364 aa11.68□□□□□ -0.54
SHANK2-209ENST00000445654 KRT4P19013 534 aa11.68□□□□□ -0.54
SHANK2-209ENST00000445654 CCNOP22674 350 aa11.68□□□□□ -0.54
SHANK2-209ENST00000445654 CBLP22681 906 aa11.68□□□□□ -0.54
SHANK2-209ENST00000445654 ZNF84P51523 738 aa11.68□□□□□ -0.54
SHANK2-209ENST00000445654 BIDP55957 195 aa11.68□□□□□ -0.54
SHANK2-209ENST00000445654 SEC61A1P61619 476 aaKnown RBP11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms