RNA–Protein interactions for RNA: ENST00000445184.1

LINC01004-201, Transcript of long intergenic non-protein coding RNA 1004, humanhuman

TSL 5 BASIC

Gene LINC01004, Length 686 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01004-201ENST00000445184 ELF3P78545 371 aaPredicted RBP3.01□□□□□ -1.93
LINC01004-201ENST00000445184 CHRNB3Q05901 458 aa3.01□□□□□ -1.93
LINC01004-201ENST00000445184 PPIDQ08752 370 aaKnown RBP3.01□□□□□ -1.93
LINC01004-201ENST00000445184 ZNF763Q0D2J5 394 aa3.01□□□□□ -1.93
LINC01004-201ENST00000445184 AANATQ16613 207 aa3.01□□□□□ -1.93
LINC01004-201ENST00000445184 WDR74Q6RFH5 385 aaPredicted RBP3.01□□□□□ -1.93
LINC01004-201ENST00000445184 PAMR1Q6UXH9 720 aa3.01□□□□□ -1.93
LINC01004-201ENST00000445184 USP50Q70EL3 339 aaPredicted RBP3.01□□□□□ -1.93
LINC01004-201ENST00000445184 SLC25A42Q86VD7 318 aa3.01□□□□□ -1.93
LINC01004-201ENST00000445184 PPP1R27Q86WC6 154 aa3.01□□□□□ -1.93
LINC01004-201ENST00000445184 HPS6Q86YV9 775 aa3.01□□□□□ -1.93
LINC01004-201ENST00000445184 NAXDQ8IW45 347 aa3.01□□□□□ -1.93
LINC01004-201ENST00000445184 PIANPQ8IYJ0 282 aa3.01□□□□□ -1.93
LINC01004-201ENST00000445184 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.01□□□□□ -1.93
LINC01004-201ENST00000445184 CHCHD10Q8WYQ3 142 aaPredicted RBP3.01□□□□□ -1.93
LINC01004-201ENST00000445184 NRGNQ92686 78 aa3.01□□□□□ -1.93
LINC01004-201ENST00000445184 VSIG2Q96IQ7 327 aa3.01□□□□□ -1.93
LINC01004-201ENST00000445184 ZNF414Q96IQ9 312 aa3.01□□□□□ -1.93
LINC01004-201ENST00000445184 PLEKHA8Q96JA3 519 aa3.01□□□□□ -1.93
LINC01004-201ENST00000445184 NOL4LQ96MY1 436 aaPredicted RBP3.01□□□□□ -1.93
LINC01004-201ENST00000445184 GSDMAQ96QA5 445 aa3.01□□□□□ -1.93
LINC01004-201ENST00000445184 PANX2Q96RD6 677 aa3.01□□□□□ -1.93
LINC01004-201ENST00000445184 PANX1Q96RD7 426 aa3.01□□□□□ -1.93
LINC01004-201ENST00000445184 CENPHQ9H3R5 247 aa3.01□□□□□ -1.93
LINC01004-201ENST00000445184 GEMIN7Q9H840 131 aaKnown RBP3.01□□□□□ -1.93
LINC01004-201ENST00000445184 ZNF702PQ9H963 129 aa3.01□□□□□ -1.93
LINC01004-201ENST00000445184 MIEF1Q9NQG6 463 aa3.01□□□□□ -1.93
LINC01004-201ENST00000445184 PSMC3IPQ9P2W1 217 aaPredicted RBP3.01□□□□□ -1.93
LINC01004-201ENST00000445184 VANGL2Q9ULK5 521 aa3.01□□□□□ -1.93
LINC01004-201ENST00000445184 FADS3Q9Y5Q0 445 aa3.01□□□□□ -1.93
LINC01004-201ENST00000445184 COMMD3-BMI1R4GMX3 469 aa3.01□□□□□ -1.93
LINC01004-201ENST00000445184 CPSF1Q10570 1443 aaKnown RBP3.01□□□□□ -1.93
LINC01004-201ENST00000445184 KIF24Q5T7B8 1368 aa3□□□□□ -1.93
LINC01004-201ENST00000445184 ITPR3Q14573 2671 aa3□□□□□ -1.93
LINC01004-201ENST00000445184 IGHV1OR21-1A0A087WYE8 117 aa3□□□□□ -1.93
LINC01004-201ENST00000445184 TRAV25A0A0B4J276 109 aa3□□□□□ -1.93
LINC01004-201ENST00000445184 NCF1BA6NI72 391 aaPredicted RBP3□□□□□ -1.93
LINC01004-201ENST00000445184 NCF1CA8MVU1 366 aaPredicted RBP3□□□□□ -1.93
LINC01004-201ENST00000445184 GOLGA8SH3BPF8 625 aa3□□□□□ -1.93
LINC01004-201ENST00000445184 DLGAP1O14490 977 aa3□□□□□ -1.93
LINC01004-201ENST00000445184 PHF1O43189 567 aaPredicted RBP3□□□□□ -1.93
LINC01004-201ENST00000445184 PFDN1O60925 122 aa3□□□□□ -1.93
LINC01004-201ENST00000445184 STAMBPO95630 424 aa3□□□□□ -1.93
LINC01004-201ENST00000445184 LGI1O95970 557 aa3□□□□□ -1.93
LINC01004-201ENST00000445184 IGHV3-48P01763 117 aa3□□□□□ -1.93
LINC01004-201ENST00000445184 MMP1P03956 469 aa3□□□□□ -1.93
LINC01004-201ENST00000445184 SEMG1P04279 462 aa3□□□□□ -1.93
LINC01004-201ENST00000445184 SLC35E2P0CK97 266 aa3□□□□□ -1.93
LINC01004-201ENST00000445184 CLDN8P56748 225 aa3□□□□□ -1.93
LINC01004-201ENST00000445184 GNGT1P63211 74 aa3□□□□□ -1.93
LINC01004-201ENST00000445184 SCRN3Q0VDG4 424 aa3□□□□□ -1.93
LINC01004-201ENST00000445184 ASAH1Q13510 395 aa3□□□□□ -1.93
LINC01004-201ENST00000445184 OXA1LQ15070 435 aa3□□□□□ -1.93
LINC01004-201ENST00000445184 NDUFA5Q16718 116 aa3□□□□□ -1.93
LINC01004-201ENST00000445184 Q1RN00 199 aa3□□□□□ -1.93
LINC01004-201ENST00000445184 LRRC36Q1X8D7 754 aa3□□□□□ -1.93
LINC01004-201ENST00000445184 QRICH1Q2TAL8 776 aa3□□□□□ -1.93
LINC01004-201ENST00000445184 ALKBH6Q3KRA9 238 aa3□□□□□ -1.93
LINC01004-201ENST00000445184 SMUG1Q53HV7 270 aa3□□□□□ -1.93
LINC01004-201ENST00000445184 OR52E8Q6IFG1 317 aa3□□□□□ -1.93
LINC01004-201ENST00000445184 PGAP1Q75T13 922 aa3□□□□□ -1.93
LINC01004-201ENST00000445184 GDPD3Q7L5L3 318 aa3□□□□□ -1.93
LINC01004-201ENST00000445184 ITPRIPQ8IWB1 547 aa3□□□□□ -1.93
LINC01004-201ENST00000445184 OFCC1Q8IZS5 231 aa3□□□□□ -1.93
LINC01004-201ENST00000445184 ATP6V0D2Q8N8Y2 350 aa3□□□□□ -1.93
LINC01004-201ENST00000445184 PLPPR1Q8TBJ4 325 aa3□□□□□ -1.93
LINC01004-201ENST00000445184 GPR151Q8TDV0 419 aa3□□□□□ -1.93
LINC01004-201ENST00000445184 RASL10AQ92737 203 aa3□□□□□ -1.93
LINC01004-201ENST00000445184 KIFAP3Q92845 792 aa3□□□□□ -1.93
LINC01004-201ENST00000445184 TBRG4Q969Z0 631 aaKnown RBP eCLIP3□□□□□ -1.935e-9■■■□□ 18.7
LINC01004-201ENST00000445184 CXorf40BQ96DE9 158 aa3□□□□□ -1.93
LINC01004-201ENST00000445184 SNF8Q96H20 258 aa3□□□□□ -1.93
LINC01004-201ENST00000445184 SEC22AQ96IW7 307 aa3□□□□□ -1.93
LINC01004-201ENST00000445184 SERAC1Q96JX3 654 aa3□□□□□ -1.93
LINC01004-201ENST00000445184 CATSPER2Q96P56 530 aa3□□□□□ -1.93
LINC01004-201ENST00000445184 SOSTQ9BQB4 213 aa3□□□□□ -1.93
LINC01004-201ENST00000445184 APOL2Q9BQE5 337 aa3□□□□□ -1.93
LINC01004-201ENST00000445184 C11orf70Q9BRQ4 267 aa3□□□□□ -1.93
LINC01004-201ENST00000445184 C20orf85Q9H1P6 137 aa3□□□□□ -1.93
LINC01004-201ENST00000445184 PARVGQ9HBI0 331 aa3□□□□□ -1.93
LINC01004-201ENST00000445184 PARVBQ9HBI1 364 aa3□□□□□ -1.93
LINC01004-201ENST00000445184 MRPS30Q9NP92 439 aaKnown RBP3□□□□□ -1.93
LINC01004-201ENST00000445184 INPP5EQ9NRR6 644 aa3□□□□□ -1.93
LINC01004-201ENST00000445184 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP3□□□□□ -1.93
LINC01004-201ENST00000445184 RMND1Q9NWS8 449 aa3□□□□□ -1.93
LINC01004-201ENST00000445184 DCDC2Q9UHG0 476 aa3□□□□□ -1.93
LINC01004-201ENST00000445184 RPL26L1Q9UNX3 145 aaKnown RBP3□□□□□ -1.93
LINC01004-201ENST00000445184 PRELID1Q9Y255 219 aa3□□□□□ -1.93
LINC01004-201ENST00000445184 RPL36Q9Y3U8 105 aaKnown RBP3□□□□□ -1.93
LINC01004-201ENST00000445184 DNAH12Q6ZR08 3092 aa3□□□□□ -1.93
LINC01004-201ENST00000445184 ASPMQ8IZT6 3477 aa3□□□□□ -1.93
LINC01004-201ENST00000445184 SPTBN2O15020 2390 aa3□□□□□ -1.93
LINC01004-201ENST00000445184 PALLDQ8WX93 1383 aa3□□□□□ -1.93
LINC01004-201ENST00000445184 WDR87Q6ZQQ6 2873 aa2.99□□□□□ -1.93
LINC01004-201ENST00000445184 TOGARAM1Q9Y4F4 1720 aa2.99□□□□□ -1.93
LINC01004-201ENST00000445184 SPTAN1Q13813 2472 aaKnown RBP2.99□□□□□ -1.93
LINC01004-201ENST00000445184 TAF1LQ8IZX4 1826 aa2.99□□□□□ -1.93
LINC01004-201ENST00000445184 IGLV8-61A0A075B6I0 122 aa2.99□□□□□ -1.93
LINC01004-201ENST00000445184 A0A1B0GTQ1 180 aa2.99□□□□□ -1.93
LINC01004-201ENST00000445184 OR5B21A6NL26 309 aa2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms