RNA–Protein interactions for RNA: ENST00000443727.1

LRCH3-208, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-208ENST00000443727 EFCAB9A8MZ26 197 aa17.32■□□□□ 0.36
LRCH3-208ENST00000443727 MAKP20794 623 aa17.32■□□□□ 0.36
LRCH3-208ENST00000443727 GLRXP35754 106 aa17.32■□□□□ 0.36
LRCH3-208ENST00000443727 LSM11P83369 360 aaKnown RBP eCLIP17.32■□□□□ 0.36
LRCH3-208ENST00000443727 TAF11Q15544 211 aa17.32■□□□□ 0.36
LRCH3-208ENST00000443727 NRN1LQ496H8 165 aa17.32■□□□□ 0.36
LRCH3-208ENST00000443727 IQCCQ4KMZ1 466 aa17.32■□□□□ 0.36
LRCH3-208ENST00000443727 OAFQ86UD1 273 aa17.32■□□□□ 0.36
LRCH3-208ENST00000443727 MEX3DQ86XN8 651 aaKnown RBP17.32■□□□□ 0.36
LRCH3-208ENST00000443727 ZCCHC24Q8N2G6 241 aaKnown RBP17.32■□□□□ 0.36
LRCH3-208ENST00000443727 LRRC18Q8N456 261 aa17.32■□□□□ 0.36
LRCH3-208ENST00000443727 NEU4Q8WWR8 484 aaPredicted RBP17.32■□□□□ 0.36
LRCH3-208ENST00000443727 NSMAFQ92636 917 aa17.32■□□□□ 0.36
LRCH3-208ENST00000443727 MRPL24Q96A35 216 aaKnown RBP17.32■□□□□ 0.36
LRCH3-208ENST00000443727 FOXN4Q96NZ1 517 aa17.32■□□□□ 0.36
LRCH3-208ENST00000443727 SEPHS2Q99611 448 aa17.32■□□□□ 0.36
LRCH3-208ENST00000443727 SYT3Q9BQG1 590 aa17.32■□□□□ 0.36
LRCH3-208ENST00000443727 CDH20Q9HBT6 801 aa17.32■□□□□ 0.36
LRCH3-208ENST00000443727 MAN2C1Q9NTJ4 1040 aa17.32■□□□□ 0.36
LRCH3-208ENST00000443727 ADA2Q9NZK5 511 aa17.32■□□□□ 0.36
LRCH3-208ENST00000443727 SLC7A8Q9UHI5 535 aa17.32■□□□□ 0.36
LRCH3-208ENST00000443727 RPS6KA6Q9UK32 745 aa17.32■□□□□ 0.36
LRCH3-208ENST00000443727 FAM32AQ9Y421 112 aaKnown RBP17.32■□□□□ 0.36
LRCH3-208ENST00000443727 TRAV27A0A087WT01 109 aa17.31■□□□□ 0.36
LRCH3-208ENST00000443727 IQCMA0A1B0GVH7 501 aa17.31■□□□□ 0.36
LRCH3-208ENST00000443727 TMEM129A0AVI4 362 aa17.31■□□□□ 0.36
LRCH3-208ENST00000443727 NPIPB13A6NJU9 1138 aa17.31■□□□□ 0.36
LRCH3-208ENST00000443727 NPIPB4C9JG80 1138 aa17.31■□□□□ 0.36
LRCH3-208ENST00000443727 M0R233 179 aa17.31■□□□□ 0.36
LRCH3-208ENST00000443727 FFAR1O14842 300 aa17.31■□□□□ 0.36
LRCH3-208ENST00000443727 SLC2A10O95528 541 aa17.31■□□□□ 0.36
LRCH3-208ENST00000443727 PTHP01270 115 aa17.31■□□□□ 0.36
LRCH3-208ENST00000443727 TSPAN19P0C672 248 aa17.31■□□□□ 0.36
LRCH3-208ENST00000443727 DAOP14920 347 aa17.31■□□□□ 0.36
LRCH3-208ENST00000443727 PRDX6P30041 224 aa17.31■□□□□ 0.36
LRCH3-208ENST00000443727 NR4A2P43354 598 aa17.31■□□□□ 0.36
LRCH3-208ENST00000443727 CTXN1P60606 82 aa17.31■□□□□ 0.36
LRCH3-208ENST00000443727 VLDLRP98155 873 aa17.31■□□□□ 0.36
LRCH3-208ENST00000443727 PRKCDQ05655 676 aa17.31■□□□□ 0.36
LRCH3-208ENST00000443727 CYB5R2Q6BCY4 276 aa17.31■□□□□ 0.36
LRCH3-208ENST00000443727 IGFN1Q86VF2 1251 aa17.31■□□□□ 0.36
LRCH3-208ENST00000443727 PRIMA1Q86XR5 153 aa17.31■□□□□ 0.36
LRCH3-208ENST00000443727 ZNF584Q8IVC4 421 aa17.31■□□□□ 0.36
LRCH3-208ENST00000443727 RNF113BQ8IZP6 322 aaKnown RBP17.31■□□□□ 0.36
LRCH3-208ENST00000443727 ZNF540Q8NDQ6 660 aa17.31■□□□□ 0.36
LRCH3-208ENST00000443727 RBM15BQ8NDT2 890 aaKnown RBP17.31■□□□□ 0.36
LRCH3-208ENST00000443727 ACOT11Q8WXI4 607 aaPredicted RBP17.31■□□□□ 0.36
LRCH3-208ENST00000443727 HDAC2Q92769 488 aaKnown RBP17.31■□□□□ 0.36
LRCH3-208ENST00000443727 RBP7Q96R05 134 aa17.31■□□□□ 0.36
LRCH3-208ENST00000443727 MRPL37Q9BZE1 423 aaKnown RBP17.31■□□□□ 0.36
LRCH3-208ENST00000443727 LRMDAQ9H2I8 198 aa17.31■□□□□ 0.36
LRCH3-208ENST00000443727 C1orf198Q9H425 327 aa17.31■□□□□ 0.36
LRCH3-208ENST00000443727 SMURF2Q9HAU4 748 aa17.31■□□□□ 0.36
LRCH3-208ENST00000443727 CCNB1IP1Q9NPC3 277 aa17.31■□□□□ 0.36
LRCH3-208ENST00000443727 GMNCA6NCL1 334 aa17.3■□□□□ 0.36
LRCH3-208ENST00000443727 SYNGR3O43761 229 aa17.3■□□□□ 0.36
LRCH3-208ENST00000443727 MGRN1O60291 552 aa17.3■□□□□ 0.36
LRCH3-208ENST00000443727 SNX3O60493 162 aa17.3■□□□□ 0.36
LRCH3-208ENST00000443727 DRD4P21917 467 aa17.3■□□□□ 0.36
LRCH3-208ENST00000443727 FUT4P22083 530 aa17.3■□□□□ 0.36
LRCH3-208ENST00000443727 CDAP32320 146 aa17.3■□□□□ 0.36
LRCH3-208ENST00000443727 EVX1P49640 407 aa17.3■□□□□ 0.36
LRCH3-208ENST00000443727 RPL27P61353 136 aaKnown RBP17.3■□□□□ 0.36
LRCH3-208ENST00000443727 HSF2Q03933 536 aa17.3■□□□□ 0.36
LRCH3-208ENST00000443727 FMODQ06828 376 aa17.3■□□□□ 0.36
LRCH3-208ENST00000443727 SGCAQ16586 387 aa17.3■□□□□ 0.36
LRCH3-208ENST00000443727 TBC1D28Q2M2D7 210 aa17.3■□□□□ 0.36
LRCH3-208ENST00000443727 C10orf128Q5T292 105 aa17.3■□□□□ 0.36
LRCH3-208ENST00000443727 C6orf52Q5T4I8 152 aa17.3■□□□□ 0.36
LRCH3-208ENST00000443727 OR1J2Q8NGS2 313 aa17.3■□□□□ 0.36
LRCH3-208ENST00000443727 OR13C2Q8NGS9 318 aa17.3■□□□□ 0.36
LRCH3-208ENST00000443727 TPK1Q9H3S4 243 aa17.3■□□□□ 0.36
LRCH3-208ENST00000443727 SIAEQ9HAT2 523 aa17.3■□□□□ 0.36
LRCH3-208ENST00000443727 ABCD2Q9UBJ2 740 aa17.3■□□□□ 0.36
LRCH3-208ENST00000443727 REV1Q9UBZ9 1251 aa17.3■□□□□ 0.36
LRCH3-208ENST00000443727 EGFL7Q9UHF1 273 aa17.3■□□□□ 0.36
LRCH3-208ENST00000443727 DUSP13Q9UII6 198 aa17.3■□□□□ 0.36
LRCH3-208ENST00000443727 FZR1Q9UM11 496 aa17.3■□□□□ 0.36
LRCH3-208ENST00000443727 ENPP4Q9Y6X5 453 aa17.3■□□□□ 0.36
LRCH3-208ENST00000443727 A0A1W2PPW3 197 aa17.29■□□□□ 0.36
LRCH3-208ENST00000443727 SLC22A23A1A5C7 686 aa17.29■□□□□ 0.36
LRCH3-208ENST00000443727 A6NIZ1 184 aa17.29■□□□□ 0.36
LRCH3-208ENST00000443727 VWC2LB2RUY7 222 aa17.29■□□□□ 0.36
LRCH3-208ENST00000443727 FAM157BP0CG42 384 aa17.29■□□□□ 0.36
LRCH3-208ENST00000443727 CCL2P13500 99 aa17.29■□□□□ 0.36
LRCH3-208ENST00000443727 RPL4P36578 427 aaKnown RBP17.29■□□□□ 0.36
LRCH3-208ENST00000443727 GUCA1AP43080 201 aaPredicted RBP17.29■□□□□ 0.36
LRCH3-208ENST00000443727 GPR4P46093 362 aa17.29■□□□□ 0.36
LRCH3-208ENST00000443727 SLC9A3P48764 834 aa17.29■□□□□ 0.36
LRCH3-208ENST00000443727 ZNF133P52736 654 aaPredicted RBP17.29■□□□□ 0.36
LRCH3-208ENST00000443727 SELENOVP59797 346 aa17.29■□□□□ 0.36
LRCH3-208ENST00000443727 RAP1BP61224 184 aa17.29■□□□□ 0.36
LRCH3-208ENST00000443727 RAP1AP62834 184 aa17.29■□□□□ 0.36
LRCH3-208ENST00000443727 MRPS34P82930 218 aaKnown RBP17.29■□□□□ 0.36
LRCH3-208ENST00000443727 FXNQ16595 210 aa17.29■□□□□ 0.36
LRCH3-208ENST00000443727 ANKDD1AQ495B1 522 aa17.29■□□□□ 0.36
LRCH3-208ENST00000443727 FAM205BPQ63HN1 556 aa17.29■□□□□ 0.36
LRCH3-208ENST00000443727 GLYATQ6IB77 296 aa17.29■□□□□ 0.36
LRCH3-208ENST00000443727 TBPL2Q6SJ96 375 aa17.29■□□□□ 0.36
LRCH3-208ENST00000443727 MBOAT2Q6ZWT7 520 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms