RNA–Protein interactions for RNA: ENST00000441602.5

VPS50-205, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-205ENST00000441602 BAIAP2L2Q6UXY1 529 aa5.4□□□□□ -1.55
VPS50-205ENST00000441602 ZNF704Q6ZNC4 412 aaPredicted RBP5.4□□□□□ -1.55
VPS50-205ENST00000441602 CHMP1BQ7LBR1 199 aa5.4□□□□□ -1.55
VPS50-205ENST00000441602 ZNF679Q8IYX0 411 aa5.4□□□□□ -1.55
VPS50-205ENST00000441602 MFSD4AQ8N468 514 aa5.4□□□□□ -1.55
VPS50-205ENST00000441602 SYT14Q8NB59 555 aa5.4□□□□□ -1.55
VPS50-205ENST00000441602 OR5M1Q8NGP8 315 aa5.4□□□□□ -1.55
VPS50-205ENST00000441602 GPR148Q8TDV2 347 aa5.4□□□□□ -1.55
VPS50-205ENST00000441602 ADAMTS17Q8TE56 1095 aa5.4□□□□□ -1.55
VPS50-205ENST00000441602 ZNF524Q96C55 264 aa5.4□□□□□ -1.55
VPS50-205ENST00000441602 TTTY10Q9BZA0 68 aa5.4□□□□□ -1.55
VPS50-205ENST00000441602 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.4□□□□□ -1.55
VPS50-205ENST00000441602 ELOVL3Q9HB03 270 aa5.4□□□□□ -1.55
VPS50-205ENST00000441602 TCF7L1Q9HCS4 588 aa5.4□□□□□ -1.55
VPS50-205ENST00000441602 ACOXLQ9NUZ1 547 aa5.4□□□□□ -1.55
VPS50-205ENST00000441602 GTF2A1LQ9UNN4 478 aa5.4□□□□□ -1.55
VPS50-205ENST00000441602 COPS3Q9UNS2 423 aa5.4□□□□□ -1.55
VPS50-205ENST00000441602 ANKRD61A6NGH8 418 aa5.39□□□□□ -1.55
VPS50-205ENST00000441602 ZNF891A8MT65 544 aaPredicted RBP5.39□□□□□ -1.55
VPS50-205ENST00000441602 RAF1P04049 648 aa5.39□□□□□ -1.55
VPS50-205ENST00000441602 CTLA4P16410 223 aa5.39□□□□□ -1.55
VPS50-205ENST00000441602 RAB3BP20337 219 aa5.39□□□□□ -1.55
VPS50-205ENST00000441602 CD96P40200 585 aa5.39□□□□□ -1.55
VPS50-205ENST00000441602 PSMB10P40306 273 aa5.39□□□□□ -1.55
VPS50-205ENST00000441602 ETV6P41212 452 aa5.39□□□□□ -1.55
VPS50-205ENST00000441602 AGFG1P52594 562 aaKnown RBP5.39□□□□□ -1.55
VPS50-205ENST00000441602 CLDN17P56750 224 aa5.39□□□□□ -1.55
VPS50-205ENST00000441602 CARD18P57730 90 aa5.39□□□□□ -1.55
VPS50-205ENST00000441602 MFAP5Q13361 173 aa5.39□□□□□ -1.55
VPS50-205ENST00000441602 SLC17A1Q14916 467 aa5.39□□□□□ -1.55
VPS50-205ENST00000441602 ZMAT1Q5H9K5 638 aa5.39□□□□□ -1.55
VPS50-205ENST00000441602 LIPNQ5VXI9 398 aa5.39□□□□□ -1.55
VPS50-205ENST00000441602 YRDCQ86U90 279 aaKnown RBP5.39□□□□□ -1.55
VPS50-205ENST00000441602 GALNT16Q8N428 558 aa5.39□□□□□ -1.55
VPS50-205ENST00000441602 OR2M7Q8NG81 312 aa5.39□□□□□ -1.55
VPS50-205ENST00000441602 OR52N5Q8NH56 324 aa5.39□□□□□ -1.55
VPS50-205ENST00000441602 ADAMTS14Q8WXS8 1223 aa5.39□□□□□ -1.55
VPS50-205ENST00000441602 NTNG2Q96CW9 530 aa5.39□□□□□ -1.55
VPS50-205ENST00000441602 DIRAS2Q96HU8 199 aa5.39□□□□□ -1.55
VPS50-205ENST00000441602 DCBLD2Q96PD2 775 aa5.39□□□□□ -1.55
VPS50-205ENST00000441602 LRFN3Q9BTN0 628 aa5.39□□□□□ -1.55
VPS50-205ENST00000441602 RNF32Q9H0A6 362 aa5.39□□□□□ -1.55
VPS50-205ENST00000441602 FAM86C1Q9NVL1 165 aa5.39□□□□□ -1.55
VPS50-205ENST00000441602 ANKRD10Q9NXR5 420 aa5.39□□□□□ -1.55
VPS50-205ENST00000441602 ABRACLQ9P1F3 81 aa5.39□□□□□ -1.55
VPS50-205ENST00000441602 ZMIZ1Q9ULJ6 1067 aa5.39□□□□□ -1.55
VPS50-205ENST00000441602 OR5H15A6NDH6 313 aa5.39□□□□□ -1.55
VPS50-205ENST00000441602 ARGFXA6NJG6 315 aa5.39□□□□□ -1.55
VPS50-205ENST00000441602 EIF1AYO14602 144 aaKnown RBP5.39□□□□□ -1.55
VPS50-205ENST00000441602 GPR171O14626 319 aa5.39□□□□□ -1.55
VPS50-205ENST00000441602 ZIC3O60481 467 aa5.39□□□□□ -1.55
VPS50-205ENST00000441602 SLC43A1O75387 559 aa5.39□□□□□ -1.55
VPS50-205ENST00000441602 APOC1P02654 83 aa5.39□□□□□ -1.55
VPS50-205ENST00000441602 CD97P48960 835 aa5.39□□□□□ -1.55
VPS50-205ENST00000441602 HCCSP53701 268 aa5.39□□□□□ -1.55
VPS50-205ENST00000441602 ARG2P78540 354 aa5.39□□□□□ -1.55
VPS50-205ENST00000441602 IDNKQ5T6J7 187 aa5.39□□□□□ -1.55
VPS50-205ENST00000441602 FDX2Q6P4F2 183 aa5.39□□□□□ -1.55
VPS50-205ENST00000441602 FAM131AQ6UXB0 335 aa5.39□□□□□ -1.55
VPS50-205ENST00000441602 LRRN1Q6UXK5 716 aa5.39□□□□□ -1.55
VPS50-205ENST00000441602 LINC00696Q6ZRV3 163 aa5.39□□□□□ -1.55
VPS50-205ENST00000441602 SSX6Q7RTT6 188 aa5.39□□□□□ -1.55
VPS50-205ENST00000441602 SLC22A16Q86VW1 577 aa5.39□□□□□ -1.55
VPS50-205ENST00000441602 KDM8Q8N371 416 aa5.39□□□□□ -1.55
VPS50-205ENST00000441602 GDPD1Q8N9F7 314 aa5.39□□□□□ -1.55
VPS50-205ENST00000441602 RNF128Q8TEB7 428 aa5.39□□□□□ -1.55
VPS50-205ENST00000441602 TSEN15Q8WW01 171 aaKnown RBP5.39□□□□□ -1.55
VPS50-205ENST00000441602 RELTQ969Z4 430 aa5.39□□□□□ -1.55
VPS50-205ENST00000441602 CPNE4Q96A23 557 aaPredicted RBP5.39□□□□□ -1.55
VPS50-205ENST00000441602 MFRPQ9BY79 579 aa5.39□□□□□ -1.55
VPS50-205ENST00000441602 C1orf198Q9H425 327 aa5.39□□□□□ -1.55
VPS50-205ENST00000441602 EXO5Q9H790 373 aa5.39□□□□□ -1.55
VPS50-205ENST00000441602 SEC61A2Q9H9S3 476 aa5.39□□□□□ -1.55
VPS50-205ENST00000441602 ABCB10Q9NRK6 738 aa5.39□□□□□ -1.55
VPS50-205ENST00000441602 MED29Q9NX70 200 aa5.39□□□□□ -1.55
VPS50-205ENST00000441602 KLHL13Q9P2N7 655 aa5.39□□□□□ -1.55
VPS50-205ENST00000441602 CKLFQ9UBR5 152 aa5.39□□□□□ -1.55
VPS50-205ENST00000441602 IL17BQ9UHF5 180 aa5.39□□□□□ -1.55
VPS50-205ENST00000441602 RCE1Q9Y256 329 aa5.39□□□□□ -1.55
VPS50-205ENST00000441602 GRIP1Q9Y3R0 1128 aa5.39□□□□□ -1.55
VPS50-205ENST00000441602 PMF1-BGLAPU3KQ54 211 aa5.39□□□□□ -1.55
VPS50-205ENST00000441602 A0A1W2PNU3 283 aaPredicted RBP5.39□□□□□ -1.55
VPS50-205ENST00000441602 SLC35F4A4IF30 521 aa5.39□□□□□ -1.55
VPS50-205ENST00000441602 FABP12A6NFH5 140 aa5.39□□□□□ -1.55
VPS50-205ENST00000441602 NOTOA8MTQ0 251 aa5.39□□□□□ -1.55
VPS50-205ENST00000441602 CDRT15L2A8MXV6 281 aa5.39□□□□□ -1.55
VPS50-205ENST00000441602 E9PI62 339 aa5.39□□□□□ -1.55
VPS50-205ENST00000441602 TRAF3IP2O43734 574 aaPredicted RBP5.39□□□□□ -1.55
VPS50-205ENST00000441602 EFNA2O43921 213 aa5.39□□□□□ -1.55
VPS50-205ENST00000441602 OPN1LWP04000 364 aa5.39□□□□□ -1.55
VPS50-205ENST00000441602 UCHL1P09936 223 aa5.39□□□□□ -1.55
VPS50-205ENST00000441602 CLEC2LP0C7M8 214 aa5.39□□□□□ -1.55
VPS50-205ENST00000441602 OCM2P0CE71 109 aa5.39□□□□□ -1.55
VPS50-205ENST00000441602 OCMP0CE72 109 aaPredicted RBP5.39□□□□□ -1.55
VPS50-205ENST00000441602 IL11P20809 199 aa5.39□□□□□ -1.55
VPS50-205ENST00000441602 TNFSF8P32971 234 aa5.39□□□□□ -1.55
VPS50-205ENST00000441602 ROM1Q03395 351 aa5.39□□□□□ -1.55
VPS50-205ENST00000441602 INPP5JQ15735 1006 aaPredicted RBP5.39□□□□□ -1.55
VPS50-205ENST00000441602 MEP1BQ16820 701 aa5.39□□□□□ -1.55
VPS50-205ENST00000441602 Q499Y3 187 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms