RNA–Protein interactions for RNA: ENST00000441438.2

SYNE2-206, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,084 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-206ENST00000441438 ZFP69Q49AA0 526 aa9.48□□□□□ -0.89
SYNE2-206ENST00000441438 TMEM205Q6UW68 189 aa9.48□□□□□ -0.89
SYNE2-206ENST00000441438 ZNF841Q6ZN19 808 aa9.48□□□□□ -0.89
SYNE2-206ENST00000441438 SKA3Q8IX90 412 aa9.48□□□□□ -0.89
SYNE2-206ENST00000441438 C11orf44Q8N8P7 122 aa9.48□□□□□ -0.89
SYNE2-206ENST00000441438 OR51S1Q8NGJ8 323 aa9.48□□□□□ -0.89
SYNE2-206ENST00000441438 MICU1Q9BPX6 476 aa9.48□□□□□ -0.89
SYNE2-206ENST00000441438 CDCA4Q9BXL8 241 aa9.48□□□□□ -0.89
SYNE2-206ENST00000441438 ASAH2Q9NR71 780 aa9.48□□□□□ -0.89
SYNE2-206ENST00000441438 MRPS28Q9Y2Q9 187 aaKnown RBP9.48□□□□□ -0.89
SYNE2-206ENST00000441438 CTSVO60911 334 aa9.48□□□□□ -0.89
SYNE2-206ENST00000441438 PROSCO94903 275 aa9.48□□□□□ -0.89
SYNE2-206ENST00000441438 CD1AP06126 327 aa9.48□□□□□ -0.89
SYNE2-206ENST00000441438 CD3EP07766 207 aa9.48□□□□□ -0.89
SYNE2-206ENST00000441438 EPXP11678 715 aa9.48□□□□□ -0.89
SYNE2-206ENST00000441438 IMPDH1P20839 514 aa9.48□□□□□ -0.89
SYNE2-206ENST00000441438 BCL6P41182 706 aa9.48□□□□□ -0.89
SYNE2-206ENST00000441438 NPBWR1P48145 328 aa9.48□□□□□ -0.89
SYNE2-206ENST00000441438 TDGF1P3P51864 188 aa9.48□□□□□ -0.89
SYNE2-206ENST00000441438 POLR2LP62875 67 aaKnown RBP9.48□□□□□ -0.89
SYNE2-206ENST00000441438 GTF2H2Q13888 395 aa9.48□□□□□ -0.89
SYNE2-206ENST00000441438 ABRAXAS2Q15018 415 aa9.48□□□□□ -0.89
SYNE2-206ENST00000441438 RBMS2Q15434 407 aaKnown RBP9.48□□□□□ -0.89
SYNE2-206ENST00000441438 MAPK14Q16539 360 aa9.48□□□□□ -0.89
SYNE2-206ENST00000441438 OGFRL1Q5TC84 451 aaPredicted RBP9.48□□□□□ -0.89
SYNE2-206ENST00000441438 GTF2H2CQ6P1K8 395 aa9.48□□□□□ -0.89
SYNE2-206ENST00000441438 PNCKQ6P2M8 343 aa9.48□□□□□ -0.89
SYNE2-206ENST00000441438 NPEPL1Q8NDH3 523 aa9.48□□□□□ -0.89
SYNE2-206ENST00000441438 OR6M1Q8NGM8 313 aa9.48□□□□□ -0.89
SYNE2-206ENST00000441438 OR2AE1Q8NHA4 323 aa9.48□□□□□ -0.89
SYNE2-206ENST00000441438 ZFP90Q8TF47 636 aa9.48□□□□□ -0.89
SYNE2-206ENST00000441438 HAPLN2Q9GZV7 340 aa9.48□□□□□ -0.89
SYNE2-206ENST00000441438 ING4Q9UNL4 249 aa9.48□□□□□ -0.89
SYNE2-206ENST00000441438 ZNF840PA6NDX5 716 aa9.47□□□□□ -0.89
SYNE2-206ENST00000441438 ANHXE9PGG2 379 aa9.47□□□□□ -0.89
SYNE2-206ENST00000441438 BTN3A3O00478 584 aa9.47□□□□□ -0.89
SYNE2-206ENST00000441438 GRPP07492 148 aa9.47□□□□□ -0.89
SYNE2-206ENST00000441438 CT62P0C5K7 136 aa9.47□□□□□ -0.89
SYNE2-206ENST00000441438 FAM87AP0C7U9 286 aa9.47□□□□□ -0.89
SYNE2-206ENST00000441438 SPP1P10451 314 aa9.47□□□□□ -0.89
SYNE2-206ENST00000441438 RFC3P40938 356 aa9.47□□□□□ -0.89
SYNE2-206ENST00000441438 WNT4P56705 351 aa9.47□□□□□ -0.89
SYNE2-206ENST00000441438 ELAVL2Q12926 359 aaKnown RBP9.47□□□□□ -0.89
SYNE2-206ENST00000441438 SURF2Q15527 256 aaPredicted RBP9.47□□□□□ -0.89
SYNE2-206ENST00000441438 ZNF239Q16600 458 aaKnown RBP9.47□□□□□ -0.89
SYNE2-206ENST00000441438 RNF111Q6ZNA4 994 aa9.47□□□□□ -0.89
SYNE2-206ENST00000441438 DTX1Q86Y01 620 aa9.47□□□□□ -0.89
SYNE2-206ENST00000441438 MDGA1Q8NFP4 955 aa9.47□□□□□ -0.89
SYNE2-206ENST00000441438 Q9H521 79 aa9.47□□□□□ -0.89
SYNE2-206ENST00000441438 REEP4Q9H6H4 257 aa9.47□□□□□ -0.89
SYNE2-206ENST00000441438 P2RX2Q9UBL9 471 aa9.47□□□□□ -0.89
SYNE2-206ENST00000441438 ZNF346Q9UL40 294 aaKnown RBP9.47□□□□□ -0.89
SYNE2-206ENST00000441438 NME7Q9Y5B8 376 aa9.47□□□□□ -0.89
SYNE2-206ENST00000441438 PTPRJQ12913 1337 aa9.47□□□□□ -0.89
SYNE2-206ENST00000441438 ITM2AO43736 263 aa9.47□□□□□ -0.89
SYNE2-206ENST00000441438 HPP00738 406 aa9.47□□□□□ -0.89
SYNE2-206ENST00000441438 C8GP07360 202 aa9.47□□□□□ -0.89
SYNE2-206ENST00000441438 UNGP13051 313 aaPredicted RBP9.47□□□□□ -0.89
SYNE2-206ENST00000441438 FOXL2P58012 376 aa9.47□□□□□ -0.89
SYNE2-206ENST00000441438 UBE2MP61081 183 aaKnown RBP9.47□□□□□ -0.89
SYNE2-206ENST00000441438 PLA2G7Q13093 441 aa9.47□□□□□ -0.89
SYNE2-206ENST00000441438 NSUN5P2Q63ZY6 315 aa9.47□□□□□ -0.89
SYNE2-206ENST00000441438 TCTN3Q6NUS6 607 aa9.47□□□□□ -0.89
SYNE2-206ENST00000441438 FAM131AQ6UXB0 335 aa9.47□□□□□ -0.89
SYNE2-206ENST00000441438 BAIAP2L2Q6UXY1 529 aa9.47□□□□□ -0.89
SYNE2-206ENST00000441438 ARPINQ7Z6K5 226 aa9.47□□□□□ -0.89
SYNE2-206ENST00000441438 TMEM217Q8N7C4 229 aa9.47□□□□□ -0.89
SYNE2-206ENST00000441438 OR5L2Q8NGL0 311 aa9.47□□□□□ -0.89
SYNE2-206ENST00000441438 OR6N1Q8NGY5 312 aa9.47□□□□□ -0.89
SYNE2-206ENST00000441438 UBASH3BQ8TF42 649 aa9.47□□□□□ -0.89
SYNE2-206ENST00000441438 CCDC32Q9BV29 185 aa9.47□□□□□ -0.89
SYNE2-206ENST00000441438 NRSN2Q9GZP1 204 aa9.47□□□□□ -0.89
SYNE2-206ENST00000441438 WNT10AQ9GZT5 417 aa9.47□□□□□ -0.89
SYNE2-206ENST00000441438 PRDM14Q9GZV8 571 aa9.47□□□□□ -0.89
SYNE2-206ENST00000441438 NAA50Q9GZZ1 169 aaKnown RBP9.47□□□□□ -0.89
SYNE2-206ENST00000441438 COQ4Q9Y3A0 265 aa9.47□□□□□ -0.89
SYNE2-206ENST00000441438 CEPT1Q9Y6K0 416 aa9.47□□□□□ -0.89
SYNE2-206ENST00000441438 V9GYY9 64 aa9.47□□□□□ -0.89
SYNE2-206ENST00000441438 A0A087X0K7 114 aa9.47□□□□□ -0.89
SYNE2-206ENST00000441438 PPIAL4CA0A0B4J2A2 164 aa9.47□□□□□ -0.89
SYNE2-206ENST00000441438 KBTBD11-OT1A0A1B0GTJ5 212 aa9.47□□□□□ -0.89
SYNE2-206ENST00000441438 GADD45GO95257 159 aa9.47□□□□□ -0.89
SYNE2-206ENST00000441438 CD74P04233 296 aa9.47□□□□□ -0.89
SYNE2-206ENST00000441438 WNT2P09544 360 aa9.47□□□□□ -0.89
SYNE2-206ENST00000441438 HTR5AP47898 357 aa9.47□□□□□ -0.89
SYNE2-206ENST00000441438 AQP4P55087 323 aa9.47□□□□□ -0.89
SYNE2-206ENST00000441438 SH3BP2P78314 561 aa9.47□□□□□ -0.89
SYNE2-206ENST00000441438 ECH1Q13011 328 aa9.47□□□□□ -0.89
SYNE2-206ENST00000441438 ASCL5Q7RTU5 278 aa9.47□□□□□ -0.89
SYNE2-206ENST00000441438 AMER2Q8N7J2 671 aa9.47□□□□□ -0.89
SYNE2-206ENST00000441438 THTPAQ9BU02 230 aa9.47□□□□□ -0.89
SYNE2-206ENST00000441438 C14orf105Q9NVL8 296 aa9.47□□□□□ -0.89
SYNE2-206ENST00000441438 RASL12Q9NYN1 266 aa9.47□□□□□ -0.89
SYNE2-206ENST00000441438 RCC2Q9P258 522 aaKnown RBP9.47□□□□□ -0.89
SYNE2-206ENST00000441438 THAP10Q9P2Z0 257 aaPredicted RBP9.47□□□□□ -0.89
SYNE2-206ENST00000441438 CLN8Q9UBY8 286 aa9.47□□□□□ -0.89
SYNE2-206ENST00000441438 A4GNTQ9UNA3 340 aa9.47□□□□□ -0.89
SYNE2-206ENST00000441438 KIR2DL5BA0A0G2JN68 375 aa9.46□□□□□ -0.89
SYNE2-206ENST00000441438 KIR2DL5BA0A0G2JPC4 375 aa9.46□□□□□ -0.89
SYNE2-206ENST00000441438 PTGESO14684 152 aa9.46□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms