RNA–Protein interactions for RNA: ENST00000440835.6

PTPRR-204, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRR, Length 2,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-204ENST00000440835 TMEM64Q6YI46 380 aa5.37□□□□□ -1.55
PTPRR-204ENST00000440835 C16orf62Q7Z3J2 963 aa5.37□□□□□ -1.55
PTPRR-204ENST00000440835 GLCCI1Q86VQ1 547 aa5.37□□□□□ -1.55
PTPRR-204ENST00000440835 C10orf53Q8N6V4 93 aa5.37□□□□□ -1.55
PTPRR-204ENST00000440835 OR8J2Q8NGG1 315 aa5.37□□□□□ -1.55
PTPRR-204ENST00000440835 OIT3Q8WWZ8 545 aa5.37□□□□□ -1.55
PTPRR-204ENST00000440835 HOXB13Q92826 284 aaPredicted RBP5.37□□□□□ -1.55
PTPRR-204ENST00000440835 RFKQ969G6 155 aa5.37□□□□□ -1.55
PTPRR-204ENST00000440835 C1GALT1C1Q96EU7 318 aa5.37□□□□□ -1.55
PTPRR-204ENST00000440835 CNRIP1Q96F85 164 aaPredicted RBP5.37□□□□□ -1.55
PTPRR-204ENST00000440835 Q96MF0 132 aa5.37□□□□□ -1.55
PTPRR-204ENST00000440835 BBS4Q96RK4 519 aa5.37□□□□□ -1.55
PTPRR-204ENST00000440835 SIGLEC11Q96RL6 698 aa5.37□□□□□ -1.55
PTPRR-204ENST00000440835 DCLRE1CQ96SD1 692 aaKnown RBP5.37□□□□□ -1.55
PTPRR-204ENST00000440835 APOL4Q9BPW4 351 aa5.37□□□□□ -1.55
PTPRR-204ENST00000440835 SLC30A2Q9BRI3 323 aa5.37□□□□□ -1.55
PTPRR-204ENST00000440835 THUMPD3Q9BV44 507 aaKnown RBP5.37□□□□□ -1.55
PTPRR-204ENST00000440835 C1QTNF6Q9BXI9 259 aa5.37□□□□□ -1.55
PTPRR-204ENST00000440835 Q9N2J8 555 aa5.37□□□□□ -1.55
PTPRR-204ENST00000440835 USE1Q9NZ43 259 aa5.37□□□□□ -1.55
PTPRR-204ENST00000440835 KLHL21Q9UJP4 597 aa5.37□□□□□ -1.55
PTPRR-204ENST00000440835 MCTS1Q9ULC4 181 aaKnown RBP5.37□□□□□ -1.55
PTPRR-204ENST00000440835 U3KQ87 197 aa5.37□□□□□ -1.55
PTPRR-204ENST00000440835 V9GYH0 126 aa5.37□□□□□ -1.55
PTPRR-204ENST00000440835 PNMA8CA0A1B0GUJ8 204 aa5.37□□□□□ -1.55
PTPRR-204ENST00000440835 A0A1W2PRG6 482 aa5.37□□□□□ -1.55
PTPRR-204ENST00000440835 SLC16A6O15403 523 aa5.37□□□□□ -1.55
PTPRR-204ENST00000440835 RGS10O43665 173 aa5.37□□□□□ -1.55
PTPRR-204ENST00000440835 NTSP30990 170 aa5.37□□□□□ -1.55
PTPRR-204ENST00000440835 SOX18P35713 384 aa5.37□□□□□ -1.55
PTPRR-204ENST00000440835 EIF1P41567 113 aaKnown RBP5.37□□□□□ -1.55
PTPRR-204ENST00000440835 STARP49675 285 aa5.37□□□□□ -1.55
PTPRR-204ENST00000440835 DSCR9P59020 149 aa5.37□□□□□ -1.55
PTPRR-204ENST00000440835 PRR5P85299 388 aa5.37□□□□□ -1.55
PTPRR-204ENST00000440835 MVKQ03426 396 aa5.37□□□□□ -1.55
PTPRR-204ENST00000440835 EXOSC7Q15024 291 aaKnown RBP5.37□□□□□ -1.55
PTPRR-204ENST00000440835 GPR68Q15743 365 aa5.37□□□□□ -1.55
PTPRR-204ENST00000440835 LRFN4Q6PJG9 635 aa5.37□□□□□ -1.55
PTPRR-204ENST00000440835 ZNF474Q6S9Z5 364 aaPredicted RBP5.37□□□□□ -1.55
PTPRR-204ENST00000440835 PRR22Q8IZ63 422 aa5.37□□□□□ -1.55
PTPRR-204ENST00000440835 UBE2J2Q8N2K1 259 aa5.37□□□□□ -1.55
PTPRR-204ENST00000440835 C16orf78Q8WTQ4 265 aa5.37□□□□□ -1.55
PTPRR-204ENST00000440835 DNAJA4Q8WW22 397 aaPredicted RBP5.37□□□□□ -1.55
PTPRR-204ENST00000440835 UBE2FQ969M7 185 aa5.37□□□□□ -1.55
PTPRR-204ENST00000440835 FAM120BQ96EK7 910 aaKnown RBP5.37□□□□□ -1.55
PTPRR-204ENST00000440835 PIK3IP1Q96FE7 263 aa5.37□□□□□ -1.55
PTPRR-204ENST00000440835 C11orf54Q9H0W9 315 aaPredicted RBP5.37□□□□□ -1.55
PTPRR-204ENST00000440835 SAV1Q9H4B6 383 aaPredicted RBP5.37□□□□□ -1.55
PTPRR-204ENST00000440835 ZCCHC4Q9H5U6 513 aa5.37□□□□□ -1.55
PTPRR-204ENST00000440835 UBTD1Q9HAC8 227 aa5.37□□□□□ -1.55
PTPRR-204ENST00000440835 SPACA1Q9HBV2 294 aa5.37□□□□□ -1.55
PTPRR-204ENST00000440835 GALNT9Q9HCQ5 603 aa5.37□□□□□ -1.55
PTPRR-204ENST00000440835 BRD7Q9NPI1 651 aa5.37□□□□□ -1.55
PTPRR-204ENST00000440835 TMEM160Q9NX00 188 aa5.37□□□□□ -1.55
PTPRR-204ENST00000440835 COPS3Q9UNS2 423 aa5.37□□□□□ -1.55
PTPRR-204ENST00000440835 DTX4Q9Y2E6 619 aa5.37□□□□□ -1.55
PTPRR-204ENST00000440835 TPRKBQ9Y3C4 175 aa5.37□□□□□ -1.55
PTPRR-204ENST00000440835 OR10H1Q9Y4A9 318 aa5.37□□□□□ -1.55
PTPRR-204ENST00000440835 CCDC182A6NF36 153 aa5.36□□□□□ -1.55
PTPRR-204ENST00000440835 GJE1A6NN92 205 aa5.36□□□□□ -1.55
PTPRR-204ENST00000440835 FAM220BPB1ANY3 271 aa5.36□□□□□ -1.55
PTPRR-204ENST00000440835 CRLF1O75462 422 aa5.36□□□□□ -1.55
PTPRR-204ENST00000440835 RBBP9O75884 186 aa5.36□□□□□ -1.55
PTPRR-204ENST00000440835 SYNGR4O95473 234 aa5.36□□□□□ -1.55
PTPRR-204ENST00000440835 CPSF4O95639 269 aaKnown RBP5.36□□□□□ -1.55
PTPRR-204ENST00000440835 TGM6O95932 706 aa5.36□□□□□ -1.55
PTPRR-204ENST00000440835 FCER2P06734 321 aa5.36□□□□□ -1.55
PTPRR-204ENST00000440835 RAP2AP10114 183 aa5.36□□□□□ -1.55
PTPRR-204ENST00000440835 HLA-DMAP28067 261 aa5.36□□□□□ -1.55
PTPRR-204ENST00000440835 ADH6P28332 368 aa5.36□□□□□ -1.55
PTPRR-204ENST00000440835 FEN1P39748 380 aaKnown RBP5.36□□□□□ -1.55
PTPRR-204ENST00000440835 ANXA11P50995 505 aaKnown RBP5.36□□□□□ -1.55
PTPRR-204ENST00000440835 CRISP3P54108 245 aa5.36□□□□□ -1.55
PTPRR-204ENST00000440835 SUMO3P55854 103 aaPredicted RBP5.36□□□□□ -1.55
PTPRR-204ENST00000440835 CTBP2P56545 445 aa5.36□□□□□ -1.55
PTPRR-204ENST00000440835 WNT3P56703 355 aa5.36□□□□□ -1.55
PTPRR-204ENST00000440835 RPS4XP62701 263 aaKnown RBP5.36□□□□□ -1.55
PTPRR-204ENST00000440835 SRYQ05066 204 aa5.36□□□□□ -1.55
PTPRR-204ENST00000440835 BAMBIQ13145 260 aa5.36□□□□□ -1.55
PTPRR-204ENST00000440835 IKZF1Q13422 519 aa5.36□□□□□ -1.55
PTPRR-204ENST00000440835 RNPS1Q15287 305 aaKnown RBP5.36□□□□□ -1.55
PTPRR-204ENST00000440835 TM4SF20Q53R12 229 aa5.36□□□□□ -1.55
PTPRR-204ENST00000440835 LRIF1Q5T3J3 769 aa5.36□□□□□ -1.55
PTPRR-204ENST00000440835 KDM4DQ6B0I6 523 aa5.36□□□□□ -1.55
PTPRR-204ENST00000440835 PODNL1Q6PEZ8 512 aa5.36□□□□□ -1.55
PTPRR-204ENST00000440835 OR2L13Q8N349 312 aa5.36□□□□□ -1.55
PTPRR-204ENST00000440835 GTPBP8Q8N3Z3 284 aaPredicted RBP5.36□□□□□ -1.55
PTPRR-204ENST00000440835 RNF175Q8N4F7 328 aa5.36□□□□□ -1.55
PTPRR-204ENST00000440835 KRTCAP2Q8N6L1 136 aa5.36□□□□□ -1.55
PTPRR-204ENST00000440835 CNEP1R1Q8N9A8 125 aa5.36□□□□□ -1.55
PTPRR-204ENST00000440835 HSD17B8Q92506 261 aa5.36□□□□□ -1.55
PTPRR-204ENST00000440835 PTP4A1Q93096 173 aa5.36□□□□□ -1.55
PTPRR-204ENST00000440835 TEX37Q96LM6 180 aa5.36□□□□□ -1.55
PTPRR-204ENST00000440835 NSMCE2Q96MF7 247 aa5.36□□□□□ -1.55
PTPRR-204ENST00000440835 CCDC115Q96NT0 180 aa5.36□□□□□ -1.55
PTPRR-204ENST00000440835 PANX1Q96RD7 426 aa5.36□□□□□ -1.55
PTPRR-204ENST00000440835 ADOQ96SZ5 270 aa5.36□□□□□ -1.55
PTPRR-204ENST00000440835 C12orf57Q99622 126 aa5.36□□□□□ -1.55
PTPRR-204ENST00000440835 PPIL3Q9H2H8 161 aaKnown RBP5.36□□□□□ -1.55
PTPRR-204ENST00000440835 HEXA-AS1Q9H8Q6 139 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms