RNA–Protein interactions for RNA: ENST00000439468.1

VPS41-207, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 354 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-207ENST00000439468 RIOK1Q9BRS2 568 aaKnown RBP2.29□□□□□ -2.04
VPS41-207ENST00000439468 UGT1A7Q9HAW7 530 aa2.29□□□□□ -2.04
VPS41-207ENST00000439468 UGT1A10Q9HAW8 530 aa2.29□□□□□ -2.04
VPS41-207ENST00000439468 UGT1A8Q9HAW9 530 aa2.29□□□□□ -2.04
VPS41-207ENST00000439468 NT5MQ9NPB1 228 aa2.29□□□□□ -2.04
VPS41-207ENST00000439468 IL26Q9NPH9 171 aa2.29□□□□□ -2.04
VPS41-207ENST00000439468 ZNF331Q9NQX6 463 aaPredicted RBP2.29□□□□□ -2.04
VPS41-207ENST00000439468 INPP5EQ9NRR6 644 aa2.29□□□□□ -2.04
VPS41-207ENST00000439468 SLC25A37Q9NYZ2 338 aa2.29□□□□□ -2.04
VPS41-207ENST00000439468 PEX16Q9Y5Y5 336 aa2.29□□□□□ -2.04
VPS41-207ENST00000439468 QSER1Q2KHR3 1735 aa2.28□□□□□ -2.04
VPS41-207ENST00000439468 PKD1L3Q7Z443 1732 aa2.28□□□□□ -2.04
VPS41-207ENST00000439468 TOPAZ1Q8N9V7 1692 aa2.28□□□□□ -2.04
VPS41-207ENST00000439468 PIK3C2BO00750 1634 aa2.28□□□□□ -2.04
VPS41-207ENST00000439468 ADGRB3O60242 1522 aa2.28□□□□□ -2.04
VPS41-207ENST00000439468 MIA2Q96PC5 1412 aa2.28□□□□□ -2.04
VPS41-207ENST00000439468 PPIAL4EA0A075B759 164 aa2.28□□□□□ -2.04
VPS41-207ENST00000439468 FAM166BA8MTA8 275 aa2.28□□□□□ -2.04
VPS41-207ENST00000439468 C12orf71A8MTZ7 269 aa2.28□□□□□ -2.04
VPS41-207ENST00000439468 CCL21O00585 134 aa2.28□□□□□ -2.04
VPS41-207ENST00000439468 GOSR2O14653 212 aa2.28□□□□□ -2.04
VPS41-207ENST00000439468 PALMO75781 387 aa2.28□□□□□ -2.04
VPS41-207ENST00000439468 FGGP02679 453 aa2.28□□□□□ -2.04
VPS41-207ENST00000439468 SERPIND1P05546 499 aa2.28□□□□□ -2.04
VPS41-207ENST00000439468 PPIAL4FP0DN26 164 aa2.28□□□□□ -2.04
VPS41-207ENST00000439468 SLC2A3P11169 496 aa2.28□□□□□ -2.04
VPS41-207ENST00000439468 TOP1P11387 765 aaKnown RBP2.28□□□□□ -2.04
VPS41-207ENST00000439468 MDKP21741 143 aaPredicted RBP2.28□□□□□ -2.04
VPS41-207ENST00000439468 GDI1P31150 447 aa2.28□□□□□ -2.04
VPS41-207ENST00000439468 EPS15P42566 896 aa2.28□□□□□ -2.04
VPS41-207ENST00000439468 FGF8P55075 233 aaPredicted RBP2.28□□□□□ -2.04
VPS41-207ENST00000439468 BST2Q10589 180 aaKnown RBP2.28□□□□□ -2.04
VPS41-207ENST00000439468 LRRC10Q5BKY1 277 aa2.28□□□□□ -2.04
VPS41-207ENST00000439468 FRMPD2BQ6IN97 320 aa2.28□□□□□ -2.04
VPS41-207ENST00000439468 RNASEKQ6P5S7 137 aaKnown RBP2.28□□□□□ -2.04
VPS41-207ENST00000439468 LRRC74BQ6ZQY2 392 aa2.28□□□□□ -2.04
VPS41-207ENST00000439468 LINC00173Q6ZV60 143 aa2.28□□□□□ -2.04
VPS41-207ENST00000439468 COX15Q7KZN9 410 aa2.28□□□□□ -2.04
VPS41-207ENST00000439468 RUFY3Q7L099 469 aa2.28□□□□□ -2.04
VPS41-207ENST00000439468 CDR2LQ86X02 465 aaPredicted RBP2.28□□□□□ -2.04
VPS41-207ENST00000439468 ZNF557Q8N988 423 aaPredicted RBP2.28□□□□□ -2.04
VPS41-207ENST00000439468 LINC01555Q8NAE3 123 aa2.28□□□□□ -2.04
VPS41-207ENST00000439468 TRPV1Q8NER1 839 aa2.28□□□□□ -2.04
VPS41-207ENST00000439468 PLPPR1Q8TBJ4 325 aa2.28□□□□□ -2.04
VPS41-207ENST00000439468 SGK3Q96BR1 496 aa2.28□□□□□ -2.04
VPS41-207ENST00000439468 HSFY1Q96LI6 401 aa2.28□□□□□ -2.04
VPS41-207ENST00000439468 SDHCQ99643 169 aaPredicted RBP2.28□□□□□ -2.04
VPS41-207ENST00000439468 TCHPQ9BT92 498 aa2.28□□□□□ -2.04
VPS41-207ENST00000439468 XCL2Q9UBD3 114 aa2.28□□□□□ -2.04
VPS41-207ENST00000439468 F11RQ9Y624 299 aaKnown RBP2.28□□□□□ -2.04
VPS41-207ENST00000439468 TNRC6CQ9HCJ0 1690 aaKnown RBP2.28□□□□□ -2.05
VPS41-207ENST00000439468 PAPPAQ13219 1627 aa2.28□□□□□ -2.05
VPS41-207ENST00000439468 MUC3AQ02505 3323 aa2.27□□□□□ -2.05
VPS41-207ENST00000439468 SCN2AQ99250 2005 aa2.27□□□□□ -2.05
VPS41-207ENST00000439468 ARHGAP21Q5T5U3 1957 aa2.27□□□□□ -2.05
VPS41-207ENST00000439468 KANK1Q14678 1352 aa2.27□□□□□ -2.05
VPS41-207ENST00000439468 MAP3K15Q6ZN16 1313 aa2.27□□□□□ -2.05
VPS41-207ENST00000439468 MYO5BQ9ULV0 1848 aa2.27□□□□□ -2.05
VPS41-207ENST00000439468 PINLYPA6NC86 204 aa2.27□□□□□ -2.05
VPS41-207ENST00000439468 GOLGA8OA6NCC3 632 aa2.27□□□□□ -2.05
VPS41-207ENST00000439468 FAM47DPA6NHR8 397 aa2.27□□□□□ -2.05
VPS41-207ENST00000439468 ZNF716A6NP11 495 aa2.27□□□□□ -2.05
VPS41-207ENST00000439468 GOLGA8NF8WBI6 632 aa2.27□□□□□ -2.05
VPS41-207ENST00000439468 H0Y8G0 127 aa2.27□□□□□ -2.05
VPS41-207ENST00000439468 AP3B1O00203 1094 aa2.27□□□□□ -2.05
VPS41-207ENST00000439468 ERLIN2O94905 339 aa2.27□□□□□ -2.05
VPS41-207ENST00000439468 PCCAP05165 728 aaPredicted RBP2.27□□□□□ -2.05
VPS41-207ENST00000439468 ZNF735P0CB33 412 aa2.27□□□□□ -2.05
VPS41-207ENST00000439468 GKN3PP0CG01 181 aa2.27□□□□□ -2.05
VPS41-207ENST00000439468 NR2C1P13056 603 aa2.27□□□□□ -2.05
VPS41-207ENST00000439468 TDGF1P13385 188 aa2.27□□□□□ -2.05
VPS41-207ENST00000439468 CHMLP26374 656 aa2.27□□□□□ -2.05
VPS41-207ENST00000439468 VHLP40337 213 aa2.27□□□□□ -2.05
VPS41-207ENST00000439468 GPR6P46095 362 aaPredicted RBP2.27□□□□□ -2.05
VPS41-207ENST00000439468 CDKN1BP46527 198 aa2.27□□□□□ -2.05
VPS41-207ENST00000439468 TDGF1P3P51864 188 aa2.27□□□□□ -2.05
VPS41-207ENST00000439468 ERVK-25P63136 954 aa2.27□□□□□ -2.05
VPS41-207ENST00000439468 AQP6Q13520 282 aa2.27□□□□□ -2.05
VPS41-207ENST00000439468 ZNF658BQ4V348 819 aaPredicted RBP2.27□□□□□ -2.05
VPS41-207ENST00000439468 SLC25A48Q6ZT89 311 aaKnown RBP2.27□□□□□ -2.05
VPS41-207ENST00000439468 TAS2R42Q7RTR8 314 aa2.27□□□□□ -2.05
VPS41-207ENST00000439468 LHFPL3Q86UP9 236 aa2.27□□□□□ -2.05
VPS41-207ENST00000439468 ZNF429Q86V71 674 aa2.27□□□□□ -2.05
VPS41-207ENST00000439468 NECAB1Q8N987 351 aa2.27□□□□□ -2.05
VPS41-207ENST00000439468 KCNG3Q8TAE7 436 aa2.27□□□□□ -2.05
VPS41-207ENST00000439468 DTX3LQ8TDB6 740 aa2.27□□□□□ -2.05
VPS41-207ENST00000439468 SDR42E1Q8WUS8 393 aa2.27□□□□□ -2.05
VPS41-207ENST00000439468 FAM104AQ969W3 186 aa2.27□□□□□ -2.05
VPS41-207ENST00000439468 DNAJC19Q96DA6 116 aa2.27□□□□□ -2.05
VPS41-207ENST00000439468 IFT74Q96LB3 600 aa2.27□□□□□ -2.05
VPS41-207ENST00000439468 GPR61Q9BZJ8 451 aa2.27□□□□□ -2.05
VPS41-207ENST00000439468 MFFQ9GZY8 342 aa2.27□□□□□ -2.05
VPS41-207ENST00000439468 DNTTIP1Q9H147 329 aa2.27□□□□□ -2.05
VPS41-207ENST00000439468 CWH43Q9H720 699 aa2.27□□□□□ -2.05
VPS41-207ENST00000439468 ANKRA2Q9H9E1 313 aa2.27□□□□□ -2.05
VPS41-207ENST00000439468 SLC2A8Q9NY64 477 aa2.27□□□□□ -2.05
VPS41-207ENST00000439468 GNPTGQ9UJJ9 305 aa2.27□□□□□ -2.05
VPS41-207ENST00000439468 IKZF2Q9UKS7 526 aa2.27□□□□□ -2.05
VPS41-207ENST00000439468 IKBKGQ9Y6K9 419 aa2.27□□□□□ -2.05
VPS41-207ENST00000439468 CDC42BPAQ5VT25 1732 aa2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms