RNA–Protein interactions for RNA: ENST00000439316.6

CLCNKA-203, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2 BASIC

Gene CLCNKA, Length 1,997 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-203ENST00000439316 RASGEF1BQ0VAM2 473 aa14.84□□□□□ -0.03
CLCNKA-203ENST00000439316 RBMS2Q15434 407 aaKnown RBP14.84□□□□□ -0.03
CLCNKA-203ENST00000439316 PCGF3Q3KNV8 242 aa14.84□□□□□ -0.03
CLCNKA-203ENST00000439316 ANKRD16Q6P6B7 361 aa14.84□□□□□ -0.03
CLCNKA-203ENST00000439316 NHLRC1Q6VVB1 395 aa14.84□□□□□ -0.03
CLCNKA-203ENST00000439316 RBPMSQ93062 196 aaKnown RBP14.84□□□□□ -0.03
CLCNKA-203ENST00000439316 MCHR2Q969V1 340 aa14.84□□□□□ -0.03
CLCNKA-203ENST00000439316 KTI12Q96EK9 354 aaPredicted RBP14.84□□□□□ -0.03
CLCNKA-203ENST00000439316 C4orf45Q96LM5 186 aa14.84□□□□□ -0.03
CLCNKA-203ENST00000439316 ZNF224Q9NZL3 707 aa14.84□□□□□ -0.03
CLCNKA-203ENST00000439316 DMDP11532 3685 aa14.83□□□□□ -0.03
CLCNKA-203ENST00000439316 TP53BP1Q12888 1972 aaPredicted RBP14.83□□□□□ -0.04
CLCNKA-203ENST00000439316 PI4KAP42356 2102 aa14.83□□□□□ -0.04
CLCNKA-203ENST00000439316 CACNA1EQ15878 2313 aa14.83□□□□□ -0.04
CLCNKA-203ENST00000439316 GGT3PA6NGU5 568 aa14.83□□□□□ -0.04
CLCNKA-203ENST00000439316 MCRIP1C9JLW8 97 aa14.83□□□□□ -0.04
CLCNKA-203ENST00000439316 H0YC42 278 aa14.83□□□□□ -0.04
CLCNKA-203ENST00000439316 ZNF264O43296 627 aa14.83□□□□□ -0.04
CLCNKA-203ENST00000439316 PRKNO60260 465 aaPredicted RBP14.83□□□□□ -0.04
CLCNKA-203ENST00000439316 RBBP9O75884 186 aa14.83□□□□□ -0.04
CLCNKA-203ENST00000439316 RENP00797 406 aa14.83□□□□□ -0.04
CLCNKA-203ENST00000439316 CSF1P09603 554 aa14.83□□□□□ -0.04
CLCNKA-203ENST00000439316 NFYAP23511 347 aaPredicted RBP14.83□□□□□ -0.04
CLCNKA-203ENST00000439316 KIR3DL2P43630 455 aa14.83□□□□□ -0.04
CLCNKA-203ENST00000439316 MAMSTRQ6ZN01 415 aa14.83□□□□□ -0.04
CLCNKA-203ENST00000439316 CHMP1BQ7LBR1 199 aa14.83□□□□□ -0.04
CLCNKA-203ENST00000439316 GPAT4Q86UL3 456 aa14.83□□□□□ -0.04
CLCNKA-203ENST00000439316 OR51A4Q8NGJ6 313 aa14.83□□□□□ -0.04
CLCNKA-203ENST00000439316 OR52B4Q8NGK2 314 aa14.83□□□□□ -0.04
CLCNKA-203ENST00000439316 OR4C16Q8NGL9 310 aa14.83□□□□□ -0.04
CLCNKA-203ENST00000439316 WDR89Q96FK6 387 aaPredicted RBP14.83□□□□□ -0.04
CLCNKA-203ENST00000439316 INTS14Q96SY0 518 aa14.83□□□□□ -0.04
CLCNKA-203ENST00000439316 PELOQ9BRX2 385 aaKnown RBP14.83□□□□□ -0.04
CLCNKA-203ENST00000439316 IER2Q9BTL4 223 aa14.83□□□□□ -0.04
CLCNKA-203ENST00000439316 TAS2R8Q9NYW2 309 aa14.83□□□□□ -0.04
CLCNKA-203ENST00000439316 ING1Q9UK53 422 aaPredicted RBP14.83□□□□□ -0.04
CLCNKA-203ENST00000439316 GMEB2Q9UKD1 530 aa14.83□□□□□ -0.04
CLCNKA-203ENST00000439316 TMEM14AQ9Y6G1 99 aa14.83□□□□□ -0.04
CLCNKA-203ENST00000439316 SCDO00767 359 aa14.82□□□□□ -0.04
CLCNKA-203ENST00000439316 PHYHO14832 338 aa14.82□□□□□ -0.04
CLCNKA-203ENST00000439316 CTAG2O75638 210 aa14.82□□□□□ -0.04
CLCNKA-203ENST00000439316 HPGDP15428 266 aa14.82□□□□□ -0.04
CLCNKA-203ENST00000439316 NME1P15531 152 aaKnown RBP14.82□□□□□ -0.04
CLCNKA-203ENST00000439316 DLX5P56178 289 aa14.82□□□□□ -0.04
CLCNKA-203ENST00000439316 FDX2Q6P4F2 183 aa14.82□□□□□ -0.04
CLCNKA-203ENST00000439316 DPY19L4Q7Z388 723 aa14.82□□□□□ -0.04
CLCNKA-203ENST00000439316 ZDHHC1Q8WTX9 485 aa14.82□□□□□ -0.04
CLCNKA-203ENST00000439316 PNPLA2Q96AD5 504 aa14.82□□□□□ -0.04
CLCNKA-203ENST00000439316 ZNF285Q96NJ3 590 aa14.82□□□□□ -0.04
CLCNKA-203ENST00000439316 DCBLD2Q96PD2 775 aa14.82□□□□□ -0.04
CLCNKA-203ENST00000439316 C12orf10Q9HB07 376 aa14.82□□□□□ -0.04
CLCNKA-203ENST00000439316 hCG_1807616A0A1W2PRN6 198 aa14.82□□□□□ -0.04
CLCNKA-203ENST00000439316 SUSD5O60279 629 aa14.82□□□□□ -0.04
CLCNKA-203ENST00000439316 FRYLO94915 3013 aa14.82□□□□□ -0.04
CLCNKA-203ENST00000439316 UTS2O95399 124 aa14.82□□□□□ -0.04
CLCNKA-203ENST00000439316 HIST1H2ABP04908 130 aa14.82□□□□□ -0.04
CLCNKA-203ENST00000439316 ACSM4P0C7M7 580 aa14.82□□□□□ -0.04
CLCNKA-203ENST00000439316 CSNK1EP49674 416 aaKnown RBP14.82□□□□□ -0.04
CLCNKA-203ENST00000439316 SIGLEC14Q08ET2 396 aa14.82□□□□□ -0.04
CLCNKA-203ENST00000439316 SERTAD2Q14140 314 aa14.82□□□□□ -0.04
CLCNKA-203ENST00000439316 HIST3H2AQ7L7L0 130 aa14.82□□□□□ -0.04
CLCNKA-203ENST00000439316 SPERTQ8NA61 448 aa14.82□□□□□ -0.04
CLCNKA-203ENST00000439316 OR6N1Q8NGY5 312 aa14.82□□□□□ -0.04
CLCNKA-203ENST00000439316 THRSPQ92748 146 aa14.82□□□□□ -0.04
CLCNKA-203ENST00000439316 HIST1H2ACQ93077 130 aa14.82□□□□□ -0.04
CLCNKA-203ENST00000439316 TAAR8Q969N4 342 aa14.82□□□□□ -0.04
CLCNKA-203ENST00000439316 AMELYQ99218 206 aa14.82□□□□□ -0.04
CLCNKA-203ENST00000439316 KLHDC3Q9BQ90 382 aa14.82□□□□□ -0.04
CLCNKA-203ENST00000439316 GINS4Q9BRT9 223 aa14.82□□□□□ -0.04
CLCNKA-203ENST00000439316 SEMA4CQ9C0C4 833 aa14.82□□□□□ -0.04
CLCNKA-203ENST00000439316 SYT4Q9H2B2 425 aa14.82□□□□□ -0.04
CLCNKA-203ENST00000439316 OPN4Q9UHM6 478 aa14.82□□□□□ -0.04
CLCNKA-203ENST00000439316 UBE2QL1A1L167 161 aa14.81□□□□□ -0.04
CLCNKA-203ENST00000439316 C17orf105B2RV13 164 aa14.81□□□□□ -0.04
CLCNKA-203ENST00000439316 B4DGG1 531 aa14.81□□□□□ -0.04
CLCNKA-203ENST00000439316 TACR3P29371 465 aa14.81□□□□□ -0.04
CLCNKA-203ENST00000439316 CSF2RBP32927 897 aa14.81□□□□□ -0.04
CLCNKA-203ENST00000439316 RPS27P42677 84 aaKnown RBP14.81□□□□□ -0.04
CLCNKA-203ENST00000439316 GABRA4P48169 554 aa14.81□□□□□ -0.04
CLCNKA-203ENST00000439316 FNTBP49356 437 aa14.81□□□□□ -0.04
CLCNKA-203ENST00000439316 EFNB2P52799 333 aa14.81□□□□□ -0.04
CLCNKA-203ENST00000439316 SEC61A1P61619 476 aaKnown RBP14.81□□□□□ -0.04
CLCNKA-203ENST00000439316 WDR38Q5JTN6 314 aa14.81□□□□□ -0.04
CLCNKA-203ENST00000439316 METTL27Q8N6F8 245 aaPredicted RBP14.81□□□□□ -0.04
CLCNKA-203ENST00000439316 OR8K3Q8NH51 312 aa14.81□□□□□ -0.04
CLCNKA-203ENST00000439316 DNASE2BQ8WZ79 361 aa14.81□□□□□ -0.04
CLCNKA-203ENST00000439316 MMABQ96EY8 250 aaPredicted RBP14.81□□□□□ -0.04
CLCNKA-203ENST00000439316 TCTN2Q96GX1 697 aa14.81□□□□□ -0.04
CLCNKA-203ENST00000439316 OR1F2PQ96R84 312 aa14.81□□□□□ -0.04
CLCNKA-203ENST00000439316 MAP3K3Q99759 626 aa14.81□□□□□ -0.04
CLCNKA-203ENST00000439316 REG4Q9BYZ8 158 aa14.81□□□□□ -0.04
CLCNKA-203ENST00000439316 ULBP3Q9BZM4 244 aa14.81□□□□□ -0.04
CLCNKA-203ENST00000439316 ADAM19Q9H013 955 aa14.81□□□□□ -0.04
CLCNKA-203ENST00000439316 DUSP15Q9H1R2 295 aaPredicted RBP14.81□□□□□ -0.04
CLCNKA-203ENST00000439316 MED9Q9NWA0 146 aa14.81□□□□□ -0.04
CLCNKA-203ENST00000439316 RDH8Q9NYR8 311 aa14.81□□□□□ -0.04
CLCNKA-203ENST00000439316 TMEM184BQ9Y519 407 aaPredicted RBP14.81□□□□□ -0.04
CLCNKA-203ENST00000439316 TTC28Q96AY4 2481 aa14.81□□□□□ -0.04
CLCNKA-203ENST00000439316 HMSDA8MTL9 139 aa14.8□□□□□ -0.04
CLCNKA-203ENST00000439316 B3GALNT1O75752 331 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms