RNA–Protein interactions for RNA: ENST00000439160.6

TCOF1-205, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,644 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-205ENST00000439160 AQP6Q13520 282 aa11.2□□□□□ -0.62
TCOF1-205ENST00000439160 CDK10Q15131 360 aa11.2□□□□□ -0.62
TCOF1-205ENST00000439160 CNN3Q15417 329 aaKnown RBP11.2□□□□□ -0.62
TCOF1-205ENST00000439160 SF3B4Q15427 424 aaKnown RBP eCLIP11.2□□□□□ -0.629e-7■■■■□ 20
TCOF1-205ENST00000439160 AGAP7PQ5VUJ5 663 aa11.2□□□□□ -0.62
TCOF1-205ENST00000439160 GLB1L2Q8IW92 636 aa11.2□□□□□ -0.62
TCOF1-205ENST00000439160 DNTTIP1Q9H147 329 aa11.2□□□□□ -0.62
TCOF1-205ENST00000439160 NOX3Q9HBY0 568 aa11.2□□□□□ -0.62
TCOF1-205ENST00000439160 MAN2C1Q9NTJ4 1040 aa11.2□□□□□ -0.62
TCOF1-205ENST00000439160 COLQQ9Y215 455 aaPredicted RBP11.2□□□□□ -0.62
TCOF1-205ENST00000439160 UTRNP46939 3433 aa11.2□□□□□ -0.62
TCOF1-205ENST00000439160 OR7C1O76099 320 aaPredicted RBP11.2□□□□□ -0.62
TCOF1-205ENST00000439160 TFP02787 698 aa11.2□□□□□ -0.62
TCOF1-205ENST00000439160 IGHV4-34P06331 123 aa11.2□□□□□ -0.62
TCOF1-205ENST00000439160 FCGR2AP12318 317 aa11.2□□□□□ -0.62
TCOF1-205ENST00000439160 ZNF44P15621 663 aa11.2□□□□□ -0.62
TCOF1-205ENST00000439160 SEC61A1P61619 476 aaKnown RBP11.2□□□□□ -0.62
TCOF1-205ENST00000439160 TEKQ02763 1124 aa11.2□□□□□ -0.62
TCOF1-205ENST00000439160 LYPD4Q6UWN0 246 aa11.2□□□□□ -0.62
TCOF1-205ENST00000439160 ST8SIA1Q92185 356 aa11.2□□□□□ -0.62
TCOF1-205ENST00000439160 DCLRE1CQ96SD1 692 aaKnown RBP11.2□□□□□ -0.62
TCOF1-205ENST00000439160 TMEM9BQ9NQ34 198 aa11.2□□□□□ -0.62
TCOF1-205ENST00000439160 PCDHGA1Q9Y5H4 931 aa11.2□□□□□ -0.62
TCOF1-205ENST00000439160 SHISA8B8ZZ34 492 aa11.2□□□□□ -0.62
TCOF1-205ENST00000439160 GPR171O14626 319 aa11.2□□□□□ -0.62
TCOF1-205ENST00000439160 ARPC5O15511 151 aa11.2□□□□□ -0.62
TCOF1-205ENST00000439160 ABHD16AO95870 558 aa11.2□□□□□ -0.62
TCOF1-205ENST00000439160 UQCRC1P31930 480 aa11.2□□□□□ -0.62
TCOF1-205ENST00000439160 TGM4P49221 684 aa11.2□□□□□ -0.62
TCOF1-205ENST00000439160 UBE2NLQ5JXB2 153 aa11.2□□□□□ -0.62
TCOF1-205ENST00000439160 DNAAF1Q8NEP3 725 aa11.2□□□□□ -0.62
TCOF1-205ENST00000439160 OR4M1Q8NGD0 313 aa11.2□□□□□ -0.62
TCOF1-205ENST00000439160 OR4Q3Q8NH05 313 aa11.2□□□□□ -0.62
TCOF1-205ENST00000439160 SELENOIQ9C0D9 397 aa11.2□□□□□ -0.62
TCOF1-205ENST00000439160 ISG20L2Q9H9L3 353 aaKnown RBP11.2□□□□□ -0.62
TCOF1-205ENST00000439160 NDUFB11Q9NX14 153 aa11.2□□□□□ -0.62
TCOF1-205ENST00000439160 IL20Q9NYY1 176 aa11.2□□□□□ -0.62
TCOF1-205ENST00000439160 CGGBP1Q9UFW8 167 aaPredicted RBP11.2□□□□□ -0.62
TCOF1-205ENST00000439160 MYO16Q9Y6X6 1858 aa11.2□□□□□ -0.62
TCOF1-205ENST00000439160 CNOT4O95628 575 aaKnown RBP11.19□□□□□ -0.62
TCOF1-205ENST00000439160 CASP3P42574 277 aa11.19□□□□□ -0.62
TCOF1-205ENST00000439160 MNX1P50219 401 aaPredicted RBP11.19□□□□□ -0.62
TCOF1-205ENST00000439160 FOXF1Q12946 379 aa11.19□□□□□ -0.62
TCOF1-205ENST00000439160 SLC36A2Q495M3 483 aa11.19□□□□□ -0.62
TCOF1-205ENST00000439160 C8orf82Q6P1X6 216 aaPredicted RBP11.19□□□□□ -0.62
TCOF1-205ENST00000439160 METAP1DQ6UB28 335 aaPredicted RBP11.19□□□□□ -0.62
TCOF1-205ENST00000439160 LRRC69Q6ZNQ3 347 aa11.19□□□□□ -0.62
TCOF1-205ENST00000439160 NOXA1Q86UR1 476 aa11.19□□□□□ -0.62
TCOF1-205ENST00000439160 BPHLQ86WA6 291 aaPredicted RBP11.19□□□□□ -0.62
TCOF1-205ENST00000439160 C1orf210Q8IVY1 113 aa11.19□□□□□ -0.62
TCOF1-205ENST00000439160 TMEM178AQ8NBL3 297 aa11.19□□□□□ -0.62
TCOF1-205ENST00000439160 SLC25A46Q96AG3 418 aa11.19□□□□□ -0.62
TCOF1-205ENST00000439160 KTI12Q96EK9 354 aaPredicted RBP11.19□□□□□ -0.62
TCOF1-205ENST00000439160 SGCZQ96LD1 299 aa11.19□□□□□ -0.62
TCOF1-205ENST00000439160 C12orf49Q9H741 205 aa11.19□□□□□ -0.62
TCOF1-205ENST00000439160 TREM1Q9NP99 234 aa11.19□□□□□ -0.62
TCOF1-205ENST00000439160 B3GALT1Q9Y5Z6 326 aa11.19□□□□□ -0.62
TCOF1-205ENST00000439160 CBX7O95931 251 aa11.19□□□□□ -0.62
TCOF1-205ENST00000439160 HRGP04196 525 aa11.19□□□□□ -0.62
TCOF1-205ENST00000439160 QDPRP09417 244 aa11.19□□□□□ -0.62
TCOF1-205ENST00000439160 PET100P0DJ07 73 aa11.19□□□□□ -0.62
TCOF1-205ENST00000439160 C21orf58P58505 322 aa11.19□□□□□ -0.62
TCOF1-205ENST00000439160 FABP5Q01469 135 aa11.19□□□□□ -0.62
TCOF1-205ENST00000439160 AIMP2Q13155 320 aaKnown RBP11.19□□□□□ -0.62
TCOF1-205ENST00000439160 MPEG1Q2M385 716 aa11.19□□□□□ -0.62
TCOF1-205ENST00000439160 DHRS13Q6UX07 377 aa11.19□□□□□ -0.62
TCOF1-205ENST00000439160 GSG1LQ6UXU4 331 aa11.19□□□□□ -0.62
TCOF1-205ENST00000439160 MKXQ8IYA7 352 aa11.19□□□□□ -0.62
TCOF1-205ENST00000439160 TMEM59Q9BXS4 323 aa11.19□□□□□ -0.62
TCOF1-205ENST00000439160 SLC22A11Q9NSA0 550 aa11.19□□□□□ -0.62
TCOF1-205ENST00000439160 UGT2A1Q9Y4X1 527 aa11.19□□□□□ -0.62
TCOF1-205ENST00000439160 R4GN57 208 aa11.19□□□□□ -0.62
TCOF1-205ENST00000439160 PTPRFP10586 1907 aa11.19□□□□□ -0.62
TCOF1-205ENST00000439160 A0A087WUJ7 227 aa11.19□□□□□ -0.62
TCOF1-205ENST00000439160 UBL3O95164 117 aa11.19□□□□□ -0.62
TCOF1-205ENST00000439160 TP53P04637 393 aaPredicted RBP11.19□□□□□ -0.62
TCOF1-205ENST00000439160 ATP1B3P54709 279 aa11.19□□□□□ -0.62
TCOF1-205ENST00000439160 MRM1Q6IN84 353 aaKnown RBP11.19□□□□□ -0.62
TCOF1-205ENST00000439160 BTLAQ7Z6A9 289 aa11.19□□□□□ -0.62
TCOF1-205ENST00000439160 MAML2Q8IZL2 1156 aaPredicted RBP11.19□□□□□ -0.62
TCOF1-205ENST00000439160 BPIFB2Q8N4F0 458 aa11.19□□□□□ -0.62
TCOF1-205ENST00000439160 RBM38Q9H0Z9 239 aaKnown RBP11.19□□□□□ -0.62
TCOF1-205ENST00000439160 RANGRFQ9HD47 186 aaPredicted RBP11.19□□□□□ -0.62
TCOF1-205ENST00000439160 KCNIP1Q9NZI2 227 aa11.19□□□□□ -0.62
TCOF1-205ENST00000439160 ZNF175Q9Y473 711 aa11.19□□□□□ -0.62
TCOF1-205ENST00000439160 ABCA7Q8IZY2 2146 aa11.19□□□□□ -0.62
TCOF1-205ENST00000439160 EP400Q96L91 3159 aa11.18□□□□□ -0.62
TCOF1-205ENST00000439160 A0A0B4J2E0 115 aa11.18□□□□□ -0.62
TCOF1-205ENST00000439160 A0A1B0GX12 115 aa11.18□□□□□ -0.62
TCOF1-205ENST00000439160 PRAMEF27A3QJZ7 478 aa11.18□□□□□ -0.62
TCOF1-205ENST00000439160 SC5DO75845 299 aa11.18□□□□□ -0.62
TCOF1-205ENST00000439160 STK17BO94768 372 aa11.18□□□□□ -0.62
TCOF1-205ENST00000439160 CPEP16870 476 aa11.18□□□□□ -0.62
TCOF1-205ENST00000439160 GNMTQ14749 295 aa11.18□□□□□ -0.62
TCOF1-205ENST00000439160 OXA1LQ15070 435 aa11.18□□□□□ -0.62
TCOF1-205ENST00000439160 CBLN3Q6UW01 205 aa11.18□□□□□ -0.62
TCOF1-205ENST00000439160 GJC3Q8NFK1 279 aa11.18□□□□□ -0.62
TCOF1-205ENST00000439160 OR9K2Q8NGE7 335 aa11.18□□□□□ -0.62
TCOF1-205ENST00000439160 DYNC2LI1Q8TCX1 351 aa11.18□□□□□ -0.62
TCOF1-205ENST00000439160 SNAPC3Q92966 411 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms