RNA–Protein interactions for RNA: ENST00000438773.2

TRAPPC9-202, Transcript of trafficking protein particle complex 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC9, Length 4,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-202ENST00000438773 GFRA3O60609 400 aa10.52□□□□□ -0.73
TRAPPC9-202ENST00000438773 ALX3O95076 343 aa10.52□□□□□ -0.73
TRAPPC9-202ENST00000438773 SNRPBP14678 240 aaKnown RBP10.52□□□□□ -0.73
TRAPPC9-202ENST00000438773 ETV6P41212 452 aa10.52□□□□□ -0.73
TRAPPC9-202ENST00000438773 CLDN17P56750 224 aa10.52□□□□□ -0.73
TRAPPC9-202ENST00000438773 RPL27P61353 136 aaKnown RBP10.52□□□□□ -0.73
TRAPPC9-202ENST00000438773 FAM189A2Q15884 450 aa10.52□□□□□ -0.73
TRAPPC9-202ENST00000438773 WDR74Q6RFH5 385 aaPredicted RBP10.52□□□□□ -0.73
TRAPPC9-202ENST00000438773 OVCH1Q7RTY7 1134 aa10.52□□□□□ -0.73
TRAPPC9-202ENST00000438773 CLDN22Q8N7P3 220 aa10.52□□□□□ -0.73
TRAPPC9-202ENST00000438773 SLC7A6Q92536 515 aa10.52□□□□□ -0.73
TRAPPC9-202ENST00000438773 TSNAXQ99598 290 aaKnown RBP10.52□□□□□ -0.73
TRAPPC9-202ENST00000438773 UTP23Q9BRU9 249 aaKnown RBP10.52□□□□□ -0.73
TRAPPC9-202ENST00000438773 OR51J1Q9H342 316 aa10.52□□□□□ -0.73
TRAPPC9-202ENST00000438773 METTL17Q9H7H0 456 aaPredicted RBP10.52□□□□□ -0.73
TRAPPC9-202ENST00000438773 RABL2AQ9UBK7 228 aaPredicted RBP10.52□□□□□ -0.73
TRAPPC9-202ENST00000438773 FBXO4Q9UKT5 387 aa10.52□□□□□ -0.73
TRAPPC9-202ENST00000438773 A0A1W2PNR3 127 aa10.52□□□□□ -0.73
TRAPPC9-202ENST00000438773 CIB4A0PJX0 185 aa10.52□□□□□ -0.73
TRAPPC9-202ENST00000438773 APOC1P02654 83 aa10.52□□□□□ -0.73
TRAPPC9-202ENST00000438773 TFP02787 698 aa10.52□□□□□ -0.73
TRAPPC9-202ENST00000438773 ERCC1P07992 297 aaPredicted RBP10.52□□□□□ -0.73
TRAPPC9-202ENST00000438773 IFNGR1P15260 489 aa10.52□□□□□ -0.73
TRAPPC9-202ENST00000438773 TBXA2RP21731 343 aa10.52□□□□□ -0.73
TRAPPC9-202ENST00000438773 PITPNBP48739 271 aa10.52□□□□□ -0.73
TRAPPC9-202ENST00000438773 CYB561P49447 251 aa10.52□□□□□ -0.73
TRAPPC9-202ENST00000438773 CCR6P51684 374 aa10.52□□□□□ -0.73
TRAPPC9-202ENST00000438773 S100A10P60903 97 aa10.52□□□□□ -0.73
TRAPPC9-202ENST00000438773 SLC35D3Q5M8T2 416 aa10.52□□□□□ -0.73
TRAPPC9-202ENST00000438773 LINC00346Q8IVM7 164 aa10.52□□□□□ -0.73
TRAPPC9-202ENST00000438773 SLC25A45Q8N413 288 aa10.52□□□□□ -0.73
TRAPPC9-202ENST00000438773 ASB17Q8WXJ9 295 aa10.52□□□□□ -0.73
TRAPPC9-202ENST00000438773 RNF170Q96K19 258 aa10.52□□□□□ -0.73
TRAPPC9-202ENST00000438773 MENTQ9BUN1 341 aa10.52□□□□□ -0.73
TRAPPC9-202ENST00000438773 ZNF346Q9UL40 294 aaKnown RBP10.52□□□□□ -0.73
TRAPPC9-202ENST00000438773 ACACAQ13085 2346 aa10.52□□□□□ -0.73
TRAPPC9-202ENST00000438773 A0A1W2PR77 199 aa10.52□□□□□ -0.73
TRAPPC9-202ENST00000438773 EEF1E1-BLOC1S5C9J1V9 151 aa10.52□□□□□ -0.73
TRAPPC9-202ENST00000438773 SCGNO76038 276 aa10.52□□□□□ -0.73
TRAPPC9-202ENST00000438773 DDAH2O95865 285 aa10.52□□□□□ -0.73
TRAPPC9-202ENST00000438773 SCGB1D2O95969 90 aa10.52□□□□□ -0.73
TRAPPC9-202ENST00000438773 CTSBP07858 339 aa10.52□□□□□ -0.73
TRAPPC9-202ENST00000438773 IL11RAQ14626 422 aa10.52□□□□□ -0.73
TRAPPC9-202ENST00000438773 EBPQ15125 230 aaKnown RBP10.52□□□□□ -0.73
TRAPPC9-202ENST00000438773 PYHIN1Q6K0P9 492 aa10.52□□□□□ -0.73
TRAPPC9-202ENST00000438773 HEPHL1Q6MZM0 1159 aa10.52□□□□□ -0.73
TRAPPC9-202ENST00000438773 C3orf33Q6P1S2 294 aa10.52□□□□□ -0.73
TRAPPC9-202ENST00000438773 TPRA1Q86W33 373 aa10.52□□□□□ -0.73
TRAPPC9-202ENST00000438773 FAM109AQ8N4B1 249 aa10.52□□□□□ -0.73
TRAPPC9-202ENST00000438773 ARIH2OSQ8N7S6 290 aa10.52□□□□□ -0.73
TRAPPC9-202ENST00000438773 OR8D4Q8NGM9 314 aa10.52□□□□□ -0.73
TRAPPC9-202ENST00000438773 TM9SF4Q92544 642 aa10.52□□□□□ -0.73
TRAPPC9-202ENST00000438773 TMEM106AQ96A25 262 aa10.52□□□□□ -0.73
TRAPPC9-202ENST00000438773 SLC25A44Q96H78 314 aaPredicted RBP10.52□□□□□ -0.73
TRAPPC9-202ENST00000438773 OR14A2Q96R54 314 aa10.52□□□□□ -0.73
TRAPPC9-202ENST00000438773 ERVMER34-1Q9H9K5 563 aa10.52□□□□□ -0.73
TRAPPC9-202ENST00000438773 CHMP1AQ9HD42 196 aaPredicted RBP10.52□□□□□ -0.73
TRAPPC9-202ENST00000438773 POLHQ9Y253 713 aa10.52□□□□□ -0.73
TRAPPC9-202ENST00000438773 SLCO1B1Q9Y6L6 691 aa10.52□□□□□ -0.73
TRAPPC9-202ENST00000438773 HEATR5BQ9P2D3 2071 aa10.52□□□□□ -0.73
TRAPPC9-202ENST00000438773 CENPVL1A0A0U1RR11 272 aa10.51□□□□□ -0.73
TRAPPC9-202ENST00000438773 DOK2O60496 412 aa10.51□□□□□ -0.73
TRAPPC9-202ENST00000438773 DIO1P49895 249 aa10.51□□□□□ -0.73
TRAPPC9-202ENST00000438773 SLC35A1P78382 337 aa10.51□□□□□ -0.73
TRAPPC9-202ENST00000438773 TMEM244Q5VVB8 128 aa10.51□□□□□ -0.73
TRAPPC9-202ENST00000438773 LIPNQ5VXI9 398 aa10.51□□□□□ -0.73
TRAPPC9-202ENST00000438773 ESPNLQ6ZVH7 1005 aa10.51□□□□□ -0.73
TRAPPC9-202ENST00000438773 PRSS45Q7RTY3 260 aa10.51□□□□□ -0.73
TRAPPC9-202ENST00000438773 INO80EQ8NBZ0 244 aaPredicted RBP10.51□□□□□ -0.73
TRAPPC9-202ENST00000438773 ZC3H10Q96K80 434 aaKnown RBP10.51□□□□□ -0.73
TRAPPC9-202ENST00000438773 MNTQ99583 582 aa10.51□□□□□ -0.73
TRAPPC9-202ENST00000438773 RANBP3Q9H6Z4 567 aaPredicted RBP10.51□□□□□ -0.73
TRAPPC9-202ENST00000438773 ANAPC1Q9H1A4 1944 aa10.51□□□□□ -0.73
TRAPPC9-202ENST00000438773 PDGFBP01127 241 aaPredicted RBP10.51□□□□□ -0.73
TRAPPC9-202ENST00000438773 CSF3P09919 207 aa10.51□□□□□ -0.73
TRAPPC9-202ENST00000438773 SOX18P35713 384 aa10.51□□□□□ -0.73
TRAPPC9-202ENST00000438773 PMS2CLQ68D20 193 aa10.51□□□□□ -0.73
TRAPPC9-202ENST00000438773 HAGHLQ6PII5 290 aaPredicted RBP10.51□□□□□ -0.73
TRAPPC9-202ENST00000438773 THSD4Q6ZMP0 1018 aa10.51□□□□□ -0.73
TRAPPC9-202ENST00000438773 ABHD12BQ7Z5M8 362 aaPredicted RBP10.51□□□□□ -0.73
TRAPPC9-202ENST00000438773 DEFB124Q8NES8 71 aa10.51□□□□□ -0.73
TRAPPC9-202ENST00000438773 ST8SIA1Q92185 356 aa10.51□□□□□ -0.73
TRAPPC9-202ENST00000438773 SLC6A7Q99884 636 aa10.51□□□□□ -0.73
TRAPPC9-202ENST00000438773 NPAP1Q9NZP6 1156 aa10.51□□□□□ -0.73
TRAPPC9-202ENST00000438773 DNAH14Q0VDD8 3507 aa10.51□□□□□ -0.73
TRAPPC9-202ENST00000438773 TRAV18A0A075B6X5 111 aa10.51□□□□□ -0.73
TRAPPC9-202ENST00000438773 ANKRD61A6NGH8 418 aa10.51□□□□□ -0.73
TRAPPC9-202ENST00000438773 B4DXG7 233 aa10.51□□□□□ -0.73
TRAPPC9-202ENST00000438773 ZNF878C9JN71 531 aa10.51□□□□□ -0.73
TRAPPC9-202ENST00000438773 M0R036 132 aa10.51□□□□□ -0.73
TRAPPC9-202ENST00000438773 STK17BO94768 372 aa10.51□□□□□ -0.73
TRAPPC9-202ENST00000438773 HTR2AP28223 471 aa10.51□□□□□ -0.73
TRAPPC9-202ENST00000438773 CRYBB2P43320 205 aa10.51□□□□□ -0.73
TRAPPC9-202ENST00000438773 KIR2DL3P43628 341 aa10.51□□□□□ -0.73
TRAPPC9-202ENST00000438773 CD300LDQ6UXZ3 194 aa10.51□□□□□ -0.73
TRAPPC9-202ENST00000438773 STX12Q86Y82 276 aa10.51□□□□□ -0.73
TRAPPC9-202ENST00000438773 CCDC36Q8IYA8 594 aa10.51□□□□□ -0.73
TRAPPC9-202ENST00000438773 TTC9Q92623 222 aa10.51□□□□□ -0.73
TRAPPC9-202ENST00000438773 KTI12Q96EK9 354 aaPredicted RBP10.51□□□□□ -0.73
TRAPPC9-202ENST00000438773 THOC3Q96J01 351 aaKnown RBP10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms