RNA–Protein interactions for RNA: ENST00000438419.6

TRAPPC13-204, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-204ENST00000438419 ECSITQ9BQ95 431 aa2.38□□□□□ -2.03
TRAPPC13-204ENST00000438419 HDHD3Q9BSH5 251 aaPredicted RBP2.38□□□□□ -2.03
TRAPPC13-204ENST00000438419 C20orf24Q9BUV8 137 aa2.38□□□□□ -2.03
TRAPPC13-204ENST00000438419 SLC25A39Q9BZJ4 359 aaPredicted RBP2.38□□□□□ -2.03
TRAPPC13-204ENST00000438419 CWH43Q9H720 699 aa2.38□□□□□ -2.03
TRAPPC13-204ENST00000438419 FGF20Q9NP95 211 aaPredicted RBP2.38□□□□□ -2.03
TRAPPC13-204ENST00000438419 ZNF331Q9NQX6 463 aaPredicted RBP2.38□□□□□ -2.03
TRAPPC13-204ENST00000438419 SAMSN1Q9NSI8 373 aaKnown RBP2.38□□□□□ -2.03
TRAPPC13-204ENST00000438419 PCYOX1Q9UHG3 505 aa2.38□□□□□ -2.03
TRAPPC13-204ENST00000438419 ING4Q9UNL4 249 aa2.38□□□□□ -2.03
TRAPPC13-204ENST00000438419 SMARCA4P51532 1647 aa2.38□□□□□ -2.03
TRAPPC13-204ENST00000438419 EIF4G3O43432 1585 aaKnown RBP2.38□□□□□ -2.03
TRAPPC13-204ENST00000438419 USP47Q96K76 1375 aa2.37□□□□□ -2.03
TRAPPC13-204ENST00000438419 HMGXB3Q12766 1538 aa2.37□□□□□ -2.03
TRAPPC13-204ENST00000438419 A0A1B0GVI7 797 aa2.37□□□□□ -2.03
TRAPPC13-204ENST00000438419 HIDE1A8MVS5 230 aa2.37□□□□□ -2.03
TRAPPC13-204ENST00000438419 CDC7O00311 574 aa2.37□□□□□ -2.03
TRAPPC13-204ENST00000438419 EIF3HO15372 352 aaKnown RBP eCLIP2.37□□□□□ -2.03
TRAPPC13-204ENST00000438419 KLHL41O60662 606 aa2.37□□□□□ -2.03
TRAPPC13-204ENST00000438419 DNAJB6O75190 326 aa2.37□□□□□ -2.03
TRAPPC13-204ENST00000438419 EEDO75530 441 aaKnown RBP2.37□□□□□ -2.03
TRAPPC13-204ENST00000438419 H6PDO95479 791 aa2.37□□□□□ -2.03
TRAPPC13-204ENST00000438419 CALM1P0DP23 149 aa2.37□□□□□ -2.03
TRAPPC13-204ENST00000438419 CALM2P0DP24 149 aa2.37□□□□□ -2.03
TRAPPC13-204ENST00000438419 CALM3P0DP25 149 aa2.37□□□□□ -2.03
TRAPPC13-204ENST00000438419 TDGF1P13385 188 aa2.37□□□□□ -2.03
TRAPPC13-204ENST00000438419 CRISP2P16562 243 aa2.37□□□□□ -2.03
TRAPPC13-204ENST00000438419 EIF2S2P20042 333 aaKnown RBP2.37□□□□□ -2.03
TRAPPC13-204ENST00000438419 AK4P27144 223 aaPredicted RBP2.37□□□□□ -2.03
TRAPPC13-204ENST00000438419 RRM2P31350 389 aa2.37□□□□□ -2.03
TRAPPC13-204ENST00000438419 NAA10P41227 235 aaPredicted RBP2.37□□□□□ -2.03
TRAPPC13-204ENST00000438419 NSG1P42857 185 aa2.37□□□□□ -2.03
TRAPPC13-204ENST00000438419 TNNT2P45379 298 aaPredicted RBP2.37□□□□□ -2.03
TRAPPC13-204ENST00000438419 RPS10P46783 165 aaKnown RBP2.37□□□□□ -2.03
TRAPPC13-204ENST00000438419 CCR8P51685 355 aa2.37□□□□□ -2.03
TRAPPC13-204ENST00000438419 TDGF1P3P51864 188 aa2.37□□□□□ -2.03
TRAPPC13-204ENST00000438419 RGS8P57771 180 aaPredicted RBP2.37□□□□□ -2.03
TRAPPC13-204ENST00000438419 RPS15P62841 145 aaKnown RBP2.37□□□□□ -2.03
TRAPPC13-204ENST00000438419 RPS21P63220 83 aaKnown RBP2.37□□□□□ -2.03
TRAPPC13-204ENST00000438419 SGCAQ16586 387 aa2.37□□□□□ -2.03
TRAPPC13-204ENST00000438419 GUCA2BQ16661 112 aa2.37□□□□□ -2.03
TRAPPC13-204ENST00000438419 SOHLH1Q5JUK2 328 aa2.37□□□□□ -2.03
TRAPPC13-204ENST00000438419 SPANXN2Q5MJ10 180 aa2.37□□□□□ -2.03
TRAPPC13-204ENST00000438419 PPM1LQ5SGD2 360 aa2.37□□□□□ -2.03
TRAPPC13-204ENST00000438419 LY6G6FQ5SQ64 297 aa2.37□□□□□ -2.03
TRAPPC13-204ENST00000438419 C9orf135Q5VTT2 229 aa2.37□□□□□ -2.03
TRAPPC13-204ENST00000438419 Q6ZSR3 168 aa2.37□□□□□ -2.03
TRAPPC13-204ENST00000438419 LINC00173Q6ZV60 143 aa2.37□□□□□ -2.03
TRAPPC13-204ENST00000438419 PDIK1LQ8N165 341 aa2.37□□□□□ -2.03
TRAPPC13-204ENST00000438419 NPBQ8NG41 125 aa2.37□□□□□ -2.03
TRAPPC13-204ENST00000438419 OR52K2Q8NGK3 314 aa2.37□□□□□ -2.03
TRAPPC13-204ENST00000438419 OR6X1Q8NH79 312 aa2.37□□□□□ -2.03
TRAPPC13-204ENST00000438419 ZNF502Q8TBZ5 544 aa2.37□□□□□ -2.03
TRAPPC13-204ENST00000438419 MCOLN3Q8TDD5 553 aa2.37□□□□□ -2.03
TRAPPC13-204ENST00000438419 IL22RA2Q969J5 263 aa2.37□□□□□ -2.03
TRAPPC13-204ENST00000438419 ZNF578Q96N58 590 aaPredicted RBP2.37□□□□□ -2.03
TRAPPC13-204ENST00000438419 OSBPL10Q9BXB5 764 aa2.37□□□□□ -2.03
TRAPPC13-204ENST00000438419 GABARAPL3Q9BY60 117 aa2.37□□□□□ -2.03
TRAPPC13-204ENST00000438419 TMEM185BQ9H7F4 350 aa2.37□□□□□ -2.03
TRAPPC13-204ENST00000438419 PTTG3PQ9NZH4 202 aa2.37□□□□□ -2.03
TRAPPC13-204ENST00000438419 GCNT4Q9P109 453 aa2.37□□□□□ -2.03
TRAPPC13-204ENST00000438419 GNPTGQ9UJJ9 305 aa2.37□□□□□ -2.03
TRAPPC13-204ENST00000438419 KIAA1257Q9ULG3 409 aa2.37□□□□□ -2.03
TRAPPC13-204ENST00000438419 VANGL2Q9ULK5 521 aa2.37□□□□□ -2.03
TRAPPC13-204ENST00000438419 TP53TG5Q9Y2B4 290 aa2.37□□□□□ -2.03
TRAPPC13-204ENST00000438419 PEX7O00628 323 aa2.36□□□□□ -2.03
TRAPPC13-204ENST00000438419 XKRYO14609 159 aa2.36□□□□□ -2.03
TRAPPC13-204ENST00000438419 RTL8CO15255 209 aa2.36□□□□□ -2.03
TRAPPC13-204ENST00000438419 SUPT3HO75486 399 aa2.36□□□□□ -2.03
TRAPPC13-204ENST00000438419 PNMA6AP0CW24 399 aaPredicted RBP2.36□□□□□ -2.03
TRAPPC13-204ENST00000438419 FOLR1P15328 257 aa2.36□□□□□ -2.03
TRAPPC13-204ENST00000438419 SERPINB5P36952 375 aa2.36□□□□□ -2.03
TRAPPC13-204ENST00000438419 ATP5OP48047 213 aa2.36□□□□□ -2.03
TRAPPC13-204ENST00000438419 CSNK1DP48730 415 aa2.36□□□□□ -2.03
TRAPPC13-204ENST00000438419 NCBP2P52298 156 aaKnown RBP eCLIP2.36□□□□□ -2.03
TRAPPC13-204ENST00000438419 C21orf59P57076 290 aa2.36□□□□□ -2.03
TRAPPC13-204ENST00000438419 COA6Q5JTJ3 125 aaKnown RBP2.36□□□□□ -2.03
TRAPPC13-204ENST00000438419 LCE1CQ5T751 118 aa2.36□□□□□ -2.03
TRAPPC13-204ENST00000438419 LCE1BQ5T7P3 118 aa2.36□□□□□ -2.03
TRAPPC13-204ENST00000438419 CYB5R2Q6BCY4 276 aa2.36□□□□□ -2.03
TRAPPC13-204ENST00000438419 TIFABQ6ZNK6 161 aa2.36□□□□□ -2.03
TRAPPC13-204ENST00000438419 EIF3MQ7L2H7 374 aaKnown RBP2.36□□□□□ -2.03
TRAPPC13-204ENST00000438419 SLC16A14Q7RTX9 510 aa2.36□□□□□ -2.03
TRAPPC13-204ENST00000438419 TMEM135Q86UB9 458 aa2.36□□□□□ -2.03
TRAPPC13-204ENST00000438419 ZNF429Q86V71 674 aa2.36□□□□□ -2.03
TRAPPC13-204ENST00000438419 ZNF433Q8N7K0 673 aaPredicted RBP2.36□□□□□ -2.03
TRAPPC13-204ENST00000438419 OR51G1Q8NGK1 321 aa2.36□□□□□ -2.03
TRAPPC13-204ENST00000438419 OR4A4PQ8NGN8 299 aa2.36□□□□□ -2.03
TRAPPC13-204ENST00000438419 AURKBQ96GD4 344 aaPredicted RBP2.36□□□□□ -2.03
TRAPPC13-204ENST00000438419 PKNOX2Q96KN3 472 aa2.36□□□□□ -2.03
TRAPPC13-204ENST00000438419 OR5B12Q96R08 314 aa2.36□□□□□ -2.03
TRAPPC13-204ENST00000438419 DNTTIP1Q9H147 329 aa2.36□□□□□ -2.03
TRAPPC13-204ENST00000438419 OR51M1Q9H341 326 aa2.36□□□□□ -2.03
TRAPPC13-204ENST00000438419 RPF2Q9H7B2 306 aaKnown RBP2.36□□□□□ -2.03
TRAPPC13-204ENST00000438419 MYOZ2Q9NPC6 264 aa2.36□□□□□ -2.03
TRAPPC13-204ENST00000438419 CTPS2Q9NRF8 586 aa2.36□□□□□ -2.03
TRAPPC13-204ENST00000438419 TMED5Q9Y3A6 229 aa2.36□□□□□ -2.03
TRAPPC13-204ENST00000438419 PTPRTO14522 1441 aa2.36□□□□□ -2.03
TRAPPC13-204ENST00000438419 SYNJ1O43426 1573 aa2.36□□□□□ -2.03
TRAPPC13-204ENST00000438419 CDC42BPBQ9Y5S2 1711 aa2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms