RNA–Protein interactions for RNA: ENST00000437600.8

CUX1-206, Transcript of cut like homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene CUX1, Length 3,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-206ENST00000437600 IL33O95760 270 aa8.55□□□□□ -1.04
CUX1-206ENST00000437600 IGKV3-11P04433 115 aa8.55□□□□□ -1.04
CUX1-206ENST00000437600 ASAH2BP0C7U1 165 aa8.55□□□□□ -1.04
CUX1-206ENST00000437600 ADRA2CP18825 462 aa8.55□□□□□ -1.04
CUX1-206ENST00000437600 M6PRP20645 277 aa8.55□□□□□ -1.04
CUX1-206ENST00000437600 CLDN20P56880 219 aa8.55□□□□□ -1.04
CUX1-206ENST00000437600 PRPS1P60891 318 aa8.55□□□□□ -1.04
CUX1-206ENST00000437600 SNTB2Q13425 540 aaKnown RBP8.55□□□□□ -1.04
CUX1-206ENST00000437600 EBPQ15125 230 aaKnown RBP8.55□□□□□ -1.04
CUX1-206ENST00000437600 NKAIN1Q4KMZ8 207 aa8.55□□□□□ -1.04
CUX1-206ENST00000437600 FNDC7Q5VTL7 733 aa8.55□□□□□ -1.04
CUX1-206ENST00000437600 SLC6A19Q695T7 634 aa8.55□□□□□ -1.04
CUX1-206ENST00000437600 RPL22L1Q6P5R6 122 aaKnown RBP8.55□□□□□ -1.04
CUX1-206ENST00000437600 ZNF527Q8NB42 609 aa8.55□□□□□ -1.04
CUX1-206ENST00000437600 PRSS33Q8NF86 280 aa8.55□□□□□ -1.04
CUX1-206ENST00000437600 SLC22A8Q8TCC7 542 aa8.55□□□□□ -1.04
CUX1-206ENST00000437600 RHBDD1Q8TEB9 315 aa8.55□□□□□ -1.04
CUX1-206ENST00000437600 NSMAFQ92636 917 aa8.55□□□□□ -1.04
CUX1-206ENST00000437600 KIAA1143Q96AT1 154 aaPredicted RBP8.55□□□□□ -1.04
CUX1-206ENST00000437600 LRFN3Q9BTN0 628 aa8.55□□□□□ -1.04
CUX1-206ENST00000437600 EMC6Q9BV81 110 aa8.55□□□□□ -1.04
CUX1-206ENST00000437600 NMNAT2Q9BZQ4 307 aa8.55□□□□□ -1.04
CUX1-206ENST00000437600 BAIAP2Q9UQB8 552 aa8.55□□□□□ -1.04
CUX1-206ENST00000437600 TRABD2BA6NFA1 517 aa8.54□□□□□ -1.04
CUX1-206ENST00000437600 ZNF879B4DU55 563 aa8.54□□□□□ -1.04
CUX1-206ENST00000437600 ZNF593O00488 134 aaPredicted RBP8.54□□□□□ -1.04
CUX1-206ENST00000437600 PPM1BO75688 479 aa8.54□□□□□ -1.04
CUX1-206ENST00000437600 CER1O95813 267 aa8.54□□□□□ -1.04
CUX1-206ENST00000437600 TCRBP04435 133 aa8.54□□□□□ -1.04
CUX1-206ENST00000437600 CCL4P13236 92 aa8.54□□□□□ -1.04
CUX1-206ENST00000437600 PTGS2P35354 604 aa8.54□□□□□ -1.04
CUX1-206ENST00000437600 TAS2R43P59537 309 aa8.54□□□□□ -1.04
CUX1-206ENST00000437600 RPS4XP62701 263 aaKnown RBP8.54□□□□□ -1.04
CUX1-206ENST00000437600 FAPQ12884 760 aa8.54□□□□□ -1.04
CUX1-206ENST00000437600 BIKQ13323 160 aa8.54□□□□□ -1.04
CUX1-206ENST00000437600 TOMM20Q15388 145 aa8.54□□□□□ -1.04
CUX1-206ENST00000437600 ELAVL1Q15717 326 aaKnown RBP8.54□□□□□ -1.04
CUX1-206ENST00000437600 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.54□□□□□ -1.044e-6■■□□□ 11.4
CUX1-206ENST00000437600 PLA1AQ53H76 456 aa8.54□□□□□ -1.04
CUX1-206ENST00000437600 IDO2Q6ZQW0 420 aa8.54□□□□□ -1.04
CUX1-206ENST00000437600 ZNF676Q8N7Q3 588 aa8.54□□□□□ -1.04
CUX1-206ENST00000437600 OR52I2Q8NH67 350 aa8.54□□□□□ -1.04
CUX1-206ENST00000437600 ADAMTS18Q8TE60 1221 aa8.54□□□□□ -1.04
CUX1-206ENST00000437600 ACOT12Q8WYK0 555 aa8.54□□□□□ -1.04
CUX1-206ENST00000437600 TMEM106AQ96A25 262 aa8.54□□□□□ -1.04
CUX1-206ENST00000437600 WDR89Q96FK6 387 aaPredicted RBP8.54□□□□□ -1.04
CUX1-206ENST00000437600 DUSP23Q9BVJ7 150 aa8.54□□□□□ -1.04
CUX1-206ENST00000437600 GON7Q9BXV9 100 aa8.54□□□□□ -1.04
CUX1-206ENST00000437600 ZMAT3Q9HA38 289 aaKnown RBP8.54□□□□□ -1.04
CUX1-206ENST00000437600 INPP5EQ9NRR6 644 aa8.54□□□□□ -1.04
CUX1-206ENST00000437600 MED11Q9P086 117 aa8.54□□□□□ -1.04
CUX1-206ENST00000437600 RCE1Q9Y256 329 aa8.54□□□□□ -1.04
CUX1-206ENST00000437600 ZNF281Q9Y2X9 895 aa8.54□□□□□ -1.04
CUX1-206ENST00000437600 HRH3Q9Y5N1 445 aa8.54□□□□□ -1.04
CUX1-206ENST00000437600 CDX4O14627 284 aaPredicted RBP8.54□□□□□ -1.04
CUX1-206ENST00000437600 ARPC3O15145 178 aa8.54□□□□□ -1.04
CUX1-206ENST00000437600 UPK3AO75631 287 aa8.54□□□□□ -1.04
CUX1-206ENST00000437600 SLC25A12O75746 678 aa8.54□□□□□ -1.04
CUX1-206ENST00000437600 PNPP00491 289 aa8.54□□□□□ -1.04
CUX1-206ENST00000437600 HLA-DQB1P01920 261 aa8.54□□□□□ -1.04
CUX1-206ENST00000437600 HPXP02790 462 aa8.54□□□□□ -1.04
CUX1-206ENST00000437600 UCHL1P09936 223 aa8.54□□□□□ -1.04
CUX1-206ENST00000437600 SDHAP31040 664 aa8.54□□□□□ -1.04
CUX1-206ENST00000437600 RRAS2P62070 204 aaPredicted RBP8.54□□□□□ -1.04
CUX1-206ENST00000437600 FMODQ06828 376 aa8.54□□□□□ -1.04
CUX1-206ENST00000437600 POU4F2Q12837 409 aa8.54□□□□□ -1.04
CUX1-206ENST00000437600 ACKR1Q16570 336 aa8.54□□□□□ -1.04
CUX1-206ENST00000437600 BTBD16Q32M84 506 aa8.54□□□□□ -1.04
CUX1-206ENST00000437600 OR7E24Q6IFN5 339 aa8.54□□□□□ -1.04
CUX1-206ENST00000437600 PRSS42Q7Z5A4 293 aa8.54□□□□□ -1.04
CUX1-206ENST00000437600 TPRA1Q86W33 373 aa8.54□□□□□ -1.04
CUX1-206ENST00000437600 TMPRSS12Q86WS5 348 aa8.54□□□□□ -1.04
CUX1-206ENST00000437600 GLB1L2Q8IW92 636 aa8.54□□□□□ -1.04
CUX1-206ENST00000437600 LRRC75AQ8NAA5 344 aa8.54□□□□□ -1.04
CUX1-206ENST00000437600 OR11H7Q8NGC8 314 aa8.54□□□□□ -1.04
CUX1-206ENST00000437600 OR5AK2Q8NH90 309 aa8.54□□□□□ -1.04
CUX1-206ENST00000437600 METTL21AQ8WXB1 218 aa8.54□□□□□ -1.04
CUX1-206ENST00000437600 DEDD2Q8WXF8 326 aa8.54□□□□□ -1.04
CUX1-206ENST00000437600 OR1F2PQ96R84 312 aa8.54□□□□□ -1.04
CUX1-206ENST00000437600 OR10A4Q9H209 315 aa8.54□□□□□ -1.04
CUX1-206ENST00000437600 COPS7AQ9UBW8 275 aa8.54□□□□□ -1.04
CUX1-206ENST00000437600 HIF3AQ9Y2N7 669 aa8.54□□□□□ -1.04
CUX1-206ENST00000437600 ZZEF1O43149 2961 aa8.54□□□□□ -1.04
CUX1-206ENST00000437600 ADAMTS20P59510 1910 aa8.54□□□□□ -1.04
CUX1-206ENST00000437600 IFITM5A6NNB3 132 aa8.54□□□□□ -1.04
CUX1-206ENST00000437600 PRR33A8MZF0 331 aa8.54□□□□□ -1.04
CUX1-206ENST00000437600 ARL6IP5O75915 188 aa8.54□□□□□ -1.04
CUX1-206ENST00000437600 SPARCP09486 303 aa8.54□□□□□ -1.04
CUX1-206ENST00000437600 ZNF28P17035 718 aa8.54□□□□□ -1.04
CUX1-206ENST00000437600 CD53P19397 219 aa8.54□□□□□ -1.04
CUX1-206ENST00000437600 SSTR2P30874 369 aa8.54□□□□□ -1.04
CUX1-206ENST00000437600 GDNFP39905 211 aa8.54□□□□□ -1.04
CUX1-206ENST00000437600 EIF1AXP47813 144 aaKnown RBP8.54□□□□□ -1.04
CUX1-206ENST00000437600 ACTA2P62736 377 aa8.54□□□□□ -1.04
CUX1-206ENST00000437600 ACTG2P63267 376 aa8.54□□□□□ -1.04
CUX1-206ENST00000437600 ARSKQ6UWY0 536 aa8.54□□□□□ -1.04
CUX1-206ENST00000437600 STAC2Q6ZMT1 411 aa8.54□□□□□ -1.04
CUX1-206ENST00000437600 ADGRG3Q86Y34 549 aa8.54□□□□□ -1.04
CUX1-206ENST00000437600 LINC00346Q8IVM7 164 aa8.54□□□□□ -1.04
CUX1-206ENST00000437600 POMGNT2Q8NAT1 580 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms