RNA–Protein interactions for RNA: ENST00000436336.6

CPSF4-204, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF4, Length 1,738 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-204ENST00000436336 AGTR1P30556 359 aa20.37■□□□□ 0.85
CPSF4-204ENST00000436336 GLO1Q04760 184 aa20.37■□□□□ 0.85
CPSF4-204ENST00000436336 ETFDHQ16134 617 aa20.37■□□□□ 0.85
CPSF4-204ENST00000436336 SLC25A47Q6Q0C1 308 aa20.37■□□□□ 0.85
CPSF4-204ENST00000436336 POMGNT2Q8NAT1 580 aa20.37■□□□□ 0.85
CPSF4-204ENST00000436336 CCDC90BQ9GZT6 254 aa20.37■□□□□ 0.85
CPSF4-204ENST00000436336 ADGRL4Q9HBW9 690 aa20.37■□□□□ 0.85
CPSF4-204ENST00000436336 COA3Q9Y2R0 106 aaPredicted RBP20.37■□□□□ 0.85
CPSF4-204ENST00000436336 PHF3Q92576 2039 aaKnown RBP20.37■□□□□ 0.85
CPSF4-204ENST00000436336 MBD3L4A6NDZ8 208 aaPredicted RBP20.36■□□□□ 0.85
CPSF4-204ENST00000436336 MBD3L3A6NE82 208 aaPredicted RBP20.36■□□□□ 0.85
CPSF4-204ENST00000436336 MBD3L5A6NJ08 208 aaPredicted RBP20.36■□□□□ 0.85
CPSF4-204ENST00000436336 SBK2P0C263 348 aa20.36■□□□□ 0.85
CPSF4-204ENST00000436336 SMIM18P0DKX4 95 aa20.36■□□□□ 0.85
CPSF4-204ENST00000436336 PHYHD1Q5SRE7 291 aa20.36■□□□□ 0.85
CPSF4-204ENST00000436336 RTL6Q6ICC9 239 aa20.36■□□□□ 0.85
CPSF4-204ENST00000436336 LRFN4Q6PJG9 635 aa20.36■□□□□ 0.85
CPSF4-204ENST00000436336 C9orf106Q8NAJ2 232 aa20.36■□□□□ 0.85
CPSF4-204ENST00000436336 OR4F15Q8NGB8 312 aa20.36■□□□□ 0.85
CPSF4-204ENST00000436336 MBD3L2Q8NHZ7 208 aaPredicted RBP20.36■□□□□ 0.85
CPSF4-204ENST00000436336 TP63Q9H3D4 680 aaPredicted RBP20.36■□□□□ 0.85
CPSF4-204ENST00000436336 SCOCQ9UIL1 159 aa20.36■□□□□ 0.85
CPSF4-204ENST00000436336 DIMT1Q9UNQ2 313 aaKnown RBP20.36■□□□□ 0.85
CPSF4-204ENST00000436336 PCDHGB1Q9Y5G3 927 aa20.36■□□□□ 0.85
CPSF4-204ENST00000436336 SNX5Q9Y5X3 404 aa20.36■□□□□ 0.85
CPSF4-204ENST00000436336 OR6C65A6NJZ3 312 aa20.36■□□□□ 0.85
CPSF4-204ENST00000436336 APOL3O95236 402 aa20.36■□□□□ 0.85
CPSF4-204ENST00000436336 RAB36O95755 333 aa20.36■□□□□ 0.85
CPSF4-204ENST00000436336 DCKP27707 260 aa20.36■□□□□ 0.85
CPSF4-204ENST00000436336 C21orf33P30042 268 aaPredicted RBP20.36■□□□□ 0.85
CPSF4-204ENST00000436336 TUBA4AP68366 448 aa20.36■□□□□ 0.85
CPSF4-204ENST00000436336 MVKQ03426 396 aa20.36■□□□□ 0.85
CPSF4-204ENST00000436336 C10orf128Q5T292 105 aa20.36■□□□□ 0.85
CPSF4-204ENST00000436336 CPT1CQ8TCG5 803 aa20.36■□□□□ 0.85
CPSF4-204ENST00000436336 NSMAFQ92636 917 aa20.36■□□□□ 0.85
CPSF4-204ENST00000436336 CNN2Q99439 309 aaKnown RBP20.36■□□□□ 0.85
CPSF4-204ENST00000436336 MRPS26Q9BYN8 205 aaKnown RBP20.36■□□□□ 0.85
CPSF4-204ENST00000436336 LINC00470Q9BZP3 86 aa20.36■□□□□ 0.85
CPSF4-204ENST00000436336 SLCO5A1Q9H2Y9 848 aa20.36■□□□□ 0.85
CPSF4-204ENST00000436336 B3GAT2Q9NPZ5 323 aa20.36■□□□□ 0.85
CPSF4-204ENST00000436336 USP24Q9UPU5 2620 aa20.36■□□□□ 0.85
CPSF4-204ENST00000436336 SHANK1Q9Y566 2161 aa20.36■□□□□ 0.85
CPSF4-204ENST00000436336 FAM215AQ9Y5M1 114 aa20.36■□□□□ 0.85
CPSF4-204ENST00000436336 TRIM64CA6NLI5 447 aa20.35■□□□□ 0.85
CPSF4-204ENST00000436336 J3QRE1 110 aa20.35■□□□□ 0.85
CPSF4-204ENST00000436336 SLC19A2O60779 497 aa20.35■□□□□ 0.85
CPSF4-204ENST00000436336 MT-ND2P03891 347 aa20.35■□□□□ 0.85
CPSF4-204ENST00000436336 GUSBP1Q15486 140 aa20.35■□□□□ 0.85
CPSF4-204ENST00000436336 RIPPLY2Q5TAB7 128 aa20.35■□□□□ 0.85
CPSF4-204ENST00000436336 SHFQ7M4L6 423 aa20.35■□□□□ 0.85
CPSF4-204ENST00000436336 SPARTQ8N0X7 666 aa20.35■□□□□ 0.85
CPSF4-204ENST00000436336 GPR137CQ8N3F9 429 aa20.35■□□□□ 0.85
CPSF4-204ENST00000436336 ZNF511Q8NB15 262 aa20.35■□□□□ 0.85
CPSF4-204ENST00000436336 ULBP2Q9BZM5 246 aa20.35■□□□□ 0.85
CPSF4-204ENST00000436336 MARCH7Q9H992 704 aa20.35■□□□□ 0.85
CPSF4-204ENST00000436336 COMMD3-BMI1R4GMX3 469 aa20.35■□□□□ 0.85
CPSF4-204ENST00000436336 FREM1Q5H8C1 2179 aa20.34■□□□□ 0.85
CPSF4-204ENST00000436336 UPK3AO75631 287 aa20.34■□□□□ 0.85
CPSF4-204ENST00000436336 MRPL3P09001 348 aaKnown RBP20.34■□□□□ 0.85
CPSF4-204ENST00000436336 ATP6V1B1P15313 513 aa20.34■□□□□ 0.85
CPSF4-204ENST00000436336 NFATC3Q12968 1075 aa20.34■□□□□ 0.85
CPSF4-204ENST00000436336 TMEM154Q6P9G4 183 aa20.34■□□□□ 0.85
CPSF4-204ENST00000436336 LYPD4Q6UWN0 246 aa20.34■□□□□ 0.85
CPSF4-204ENST00000436336 FAM214BQ7L5A3 538 aa20.34■□□□□ 0.85
CPSF4-204ENST00000436336 NUFIP2Q7Z417 695 aaKnown RBP20.34■□□□□ 0.85
CPSF4-204ENST00000436336 DOLPP1Q86YN1 238 aa20.34■□□□□ 0.85
CPSF4-204ENST00000436336 GLB1L2Q8IW92 636 aa20.34■□□□□ 0.85
CPSF4-204ENST00000436336 APH1AQ96BI3 265 aa20.34■□□□□ 0.85
CPSF4-204ENST00000436336 IGHA1P01876 353 aa20.33■□□□□ 0.85
CPSF4-204ENST00000436336 HLA-DQA2P01906 255 aa20.33■□□□□ 0.85
CPSF4-204ENST00000436336 RNLSQ5VYX0 342 aa20.33■□□□□ 0.85
CPSF4-204ENST00000436336 SEM1Q6ZVN7 128 aa20.33■□□□□ 0.85
CPSF4-204ENST00000436336 TIGD4Q8IY51 512 aa20.33■□□□□ 0.85
CPSF4-204ENST00000436336 ST6GALNAC3Q8NDV1 305 aa20.33■□□□□ 0.85
CPSF4-204ENST00000436336 JAM3Q9BX67 310 aa20.33■□□□□ 0.85
CPSF4-204ENST00000436336 CDCA4Q9BXL8 241 aa20.33■□□□□ 0.85
CPSF4-204ENST00000436336 EMC9Q9Y3B6 208 aa20.33■□□□□ 0.85
CPSF4-204ENST00000436336 TVP23AA6NH52 213 aa20.33■□□□□ 0.84
CPSF4-204ENST00000436336 DHHO43323 396 aa20.33■□□□□ 0.84
CPSF4-204ENST00000436336 SELENOFO60613 162 aa20.33■□□□□ 0.84
CPSF4-204ENST00000436336 GPANK1O95872 356 aa20.33■□□□□ 0.84
CPSF4-204ENST00000436336 ADRA2AP08913 450 aa20.33■□□□□ 0.84
CPSF4-204ENST00000436336 LAP3P28838 519 aa20.33■□□□□ 0.84
CPSF4-204ENST00000436336 TIMP3P35625 211 aa20.33■□□□□ 0.84
CPSF4-204ENST00000436336 ACTC1P68032 377 aa20.33■□□□□ 0.84
CPSF4-204ENST00000436336 ACTA1P68133 377 aa20.33■□□□□ 0.84
CPSF4-204ENST00000436336 HSF2Q03933 536 aa20.33■□□□□ 0.84
CPSF4-204ENST00000436336 TSPO2Q5TGU0 170 aa20.33■□□□□ 0.84
CPSF4-204ENST00000436336 SLC16A9Q7RTY1 509 aa20.33■□□□□ 0.84
CPSF4-204ENST00000436336 ZC3HAV1Q7Z2W4 902 aaKnown RBP20.33■□□□□ 0.84
CPSF4-204ENST00000436336 ERI1Q8IV48 349 aaKnown RBP20.33■□□□□ 0.84
CPSF4-204ENST00000436336 ZNF100Q8IYN0 542 aa20.33■□□□□ 0.84
CPSF4-204ENST00000436336 GCNT2Q8N0V5 402 aa20.33■□□□□ 0.84
CPSF4-204ENST00000436336 SVOPQ8N4V2 548 aa20.33■□□□□ 0.84
CPSF4-204ENST00000436336 SLC26A10Q8NG04 563 aa20.33■□□□□ 0.84
CPSF4-204ENST00000436336 ZFP3Q96NJ6 502 aa20.33■□□□□ 0.84
CPSF4-204ENST00000436336 FOXN4Q96NZ1 517 aa20.33■□□□□ 0.84
CPSF4-204ENST00000436336 EXOSC1Q9Y3B2 195 aaKnown RBP20.33■□□□□ 0.84
CPSF4-204ENST00000436336 ATRXP46100 2492 aa20.33■□□□□ 0.84
CPSF4-204ENST00000436336 CLPTM1O96005 669 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms